Assessing the hidden diversity underlying consensus sequences of SARS-CoV-2 using VICOS, a novel bioinformatic pipeline for identification of mixed viral populations

Introduction: Coinfection with two SARS-CoV-2 viruses is still a very understudied phenomenon. Although next generation sequencing methods are very sensitive to detect heterogeneous viral populations in a sample, there is no standardized method for their characterization, so their clinical and epide...

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Main Authors:	Goya, Stephanie, Sosa, Ezequiel Jorge, Nabaes Jodar, Mercedes Soledad, Torres, Carolina, Konig, Guido Alberto, Acuña, Dolores, Ceballos, Santiago, Distefano, Ana Julia, Dopazo, Hernán, Dus Santos, Maria Jose, Fass, Monica Irinia, Fernandez Do Porto, Darío Augusto, Fernandez, Ailen, Gallego, Fernando, Gismondi, Maria Ines, Gramundi, Ivan, Lusso, Silvina, Marti, Marcelo Adrián, Mazzeo, Melina, Mistchenko, Alicia Susana, Muñoz Hidalgo, Marianne Graziel, Natale, Mónica, Nardi, Cristina, Ousset, Julia, Peralta, Andrea Veronica, Pintos, Carolina, Puebla, Andrea Fabiana, Pianciola, Luis, Rivarola, Maximo Lisandro, Turjanski, Adrián, Valinotto, Laura, Vera, Pablo Alfredo, Zaiat, Jonathan, Zubrycki, Jeremias Enrique, Aulicino, Paula, Viegas, Mariana
Format:	info:ar-repo/semantics/artículo
Language:	Inglés
Published:	Elsevier 2023
Subjects:	Severe Acute Respiratory Syndrome Coronavirus 2 Bioinformatics Viruses Coronavirus del Síndrome Respiratorio Agudo Grave 2 Bioinformática Virus Coinfection Intra-host Evolution Coinfección Evolución Intrahospedador
Online Access:	http://hdl.handle.net/20.500.12123/15828 https://www.sciencedirect.com/science/article/pii/S0168170222003641 https://doi.org/10.1016/j.virusres.2022.199035