AquaPath: a web-based user interface for rapid identification of aquaculture pathogens based on long-read DNA sequence data

Currently AquaPath features three identification tools that cover (1) major sequence type of piscine Group B Streptococcus (GBS), (2) most serotype of GBS and (3) major biotype of Yersinia ruckeri. AquaPath is still under development and more tools will be developed to cover additional bacterial spe...

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Detalles Bibliográficos
Autor principal: CGIAR Platform for Big Data in Agriculture
Formato: Informe técnico
Lenguaje:Inglés
Publicado: 2021
Materias:
Acceso en línea:https://hdl.handle.net/10568/122962
Descripción
Sumario:Currently AquaPath features three identification tools that cover (1) major sequence type of piscine Group B Streptococcus (GBS), (2) most serotype of GBS and (3) major biotype of Yersinia ruckeri. AquaPath is still under development and more tools will be developed to cover additional bacterial species. https://worldfishcenter.github.io/rappseq/identify/