Genomics of the origin and evolution of Citrus
The genus Citrus, comprising some of the most widely cultivated fruit crops worldwide, includes an uncertain number of species. Here we describe ten natural citrus species, using genomic, phylogenetic and biogeographic analyses of 60 accessions representing diverse citrus germ plasms, and propose...
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| Formato: | article |
| Lenguaje: | Inglés |
| Publicado: |
Springer Nature
2018
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| Acceso en línea: | http://hdl.handle.net/20.500.11939/5741 https://www.nature.com/articles/nature25447.pdf |
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| author | Wu, Guohong Albert Terol, Javier Ibanez, Victoria López-García, Antonio Pérez-Román, Estela Borredá, Carles Domingo, Concha Tadeo, Francisco R. Carbonell-Caballero, Jose Alonso, Roberto Curk, Franck Du, Dongliang Ollitrault, Patrick Roose, Mikeal L. Dopazo, Joaquín Gmitter Jr., Frederick G. Rokhsar, Daniel S. Talón, Manuel |
| author_browse | Alonso, Roberto Borredá, Carles Carbonell-Caballero, Jose Curk, Franck Domingo, Concha Dopazo, Joaquín Du, Dongliang Gmitter Jr., Frederick G. Ibanez, Victoria López-García, Antonio Ollitrault, Patrick Pérez-Román, Estela Rokhsar, Daniel S. Roose, Mikeal L. Tadeo, Francisco R. Talón, Manuel Terol, Javier Wu, Guohong Albert |
| author_facet | Wu, Guohong Albert Terol, Javier Ibanez, Victoria López-García, Antonio Pérez-Román, Estela Borredá, Carles Domingo, Concha Tadeo, Francisco R. Carbonell-Caballero, Jose Alonso, Roberto Curk, Franck Du, Dongliang Ollitrault, Patrick Roose, Mikeal L. Dopazo, Joaquín Gmitter Jr., Frederick G. Rokhsar, Daniel S. Talón, Manuel |
| author_sort | Wu, Guohong Albert |
| collection | ReDivia |
| description | The genus Citrus, comprising some of the most widely cultivated fruit crops worldwide, includes an uncertain number of species. Here we describe ten natural citrus species, using genomic, phylogenetic and biogeographic analyses of 60 accessions representing diverse citrus germ plasms, and propose that citrus diversified during the late Miocene epoch through a rapid southeast Asian radiation that correlates with a marked weakening of the monsoons. A second radiation enabled by migration across the Wallace line gave rise to the Australian limes in the early Pliocene epoch. Further
identification and analyses of hybrids and admixed genomes provides insights into the genealogy of major commercial cultivars of citrus. Among mandarins and sweet orange, we find an extensive network of relatedness that illuminates the
domestication of these groups. Widespread pummelo admixture among these mandarins and its correlation with fruit size and acidity suggests a plausible role of pummelo introgression in the selection of palatable mandarins. This work provides a new evolutionary framework for the genus Citrus. |
| format | article |
| id | ReDivia5741 |
| institution | Instituto Valenciano de Investigaciones Agrarias (IVIA) |
| language | Inglés |
| publishDate | 2018 |
| publishDateRange | 2018 |
| publishDateSort | 2018 |
| publisher | Springer Nature |
| publisherStr | Springer Nature |
| record_format | dspace |
| spelling | ReDivia57412025-04-25T14:45:54Z Genomics of the origin and evolution of Citrus Wu, Guohong Albert Terol, Javier Ibanez, Victoria López-García, Antonio Pérez-Román, Estela Borredá, Carles Domingo, Concha Tadeo, Francisco R. Carbonell-Caballero, Jose Alonso, Roberto Curk, Franck Du, Dongliang Ollitrault, Patrick Roose, Mikeal L. Dopazo, Joaquín Gmitter Jr., Frederick G. Rokhsar, Daniel S. Talón, Manuel F30 Plant genetics and breeding genomics Citrus The genus Citrus, comprising some of the most widely cultivated fruit crops worldwide, includes an uncertain number of species. Here we describe ten natural citrus species, using genomic, phylogenetic and biogeographic analyses of 60 accessions representing diverse citrus germ plasms, and propose that citrus diversified during the late Miocene epoch through a rapid southeast Asian radiation that correlates with a marked weakening of the monsoons. A second radiation enabled by migration across the Wallace line gave rise to the Australian limes in the early Pliocene epoch. Further identification and analyses of hybrids and admixed genomes provides insights into the genealogy of major commercial cultivars of citrus. Among mandarins and sweet orange, we find an extensive network of relatedness that illuminates the domestication of these groups. Widespread pummelo admixture among these mandarins and its correlation with fruit size and acidity suggests a plausible role of pummelo introgression in the selection of palatable mandarins. This work provides a new evolutionary framework for the genus Citrus. 2018-02-07T19:33:06Z 2018-02-07T19:33:06Z 2018 article publishedVersion Wu, G. A., Terol, J., Ibanez, V., Lopez-Garcia, A., Perez-Roman, E., Borreda, C. et al. (2018). Genomics of the origin and evolution of Citrus. Nature, 554, 311–316. 1476-4687 http://hdl.handle.net/20.500.11939/5741 10.1038/nature25447 https://www.nature.com/articles/nature25447.pdf en_US info:eu-repo/grantAgreement/AEI/Programa Estatal de I+D+i Orientada a los Retos de la Sociedad/RTA-00071-C06-01 INIA. Programa Estatal de I+D+I Orientada a los Retos de la Sociedad, ref. RTA-00071-C06-01 Atribución-NoComercial-SinDerivadas 3.0 España http://creativecommons.org/licenses/by-nc-nd/3.0/es/ Springer Nature electronico |
| spellingShingle | F30 Plant genetics and breeding genomics Citrus Wu, Guohong Albert Terol, Javier Ibanez, Victoria López-García, Antonio Pérez-Román, Estela Borredá, Carles Domingo, Concha Tadeo, Francisco R. Carbonell-Caballero, Jose Alonso, Roberto Curk, Franck Du, Dongliang Ollitrault, Patrick Roose, Mikeal L. Dopazo, Joaquín Gmitter Jr., Frederick G. Rokhsar, Daniel S. Talón, Manuel Genomics of the origin and evolution of Citrus |
| title | Genomics of the origin and evolution of Citrus |
| title_full | Genomics of the origin and evolution of Citrus |
| title_fullStr | Genomics of the origin and evolution of Citrus |
| title_full_unstemmed | Genomics of the origin and evolution of Citrus |
| title_short | Genomics of the origin and evolution of Citrus |
| title_sort | genomics of the origin and evolution of citrus |
| topic | F30 Plant genetics and breeding genomics Citrus |
| url | http://hdl.handle.net/20.500.11939/5741 https://www.nature.com/articles/nature25447.pdf |
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