Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan
The complete genome of a severe isolate of Cucumber vein yellowing virus (CVYV) from Jordan was sequenced. Comparison with the genome of a Spanish CVYV isolate inducing very mild symptoms in cucumber cultivars revealed a nucleotide identity of 94% for the complete genome and an amino acid identity o...
| Autores principales: | , , , , |
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| Formato: | article |
| Lenguaje: | Inglés |
| Publicado: |
2017
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| Acceso en línea: | http://hdl.handle.net/20.500.11939/5222 |
| _version_ | 1855032244916191232 |
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| author | Galipienso, Luis Rubio, Luis Aramburu, Jose Velasco, Leonardo Janssen, Dirk |
| author_browse | Aramburu, Jose Galipienso, Luis Janssen, Dirk Rubio, Luis Velasco, Leonardo |
| author_facet | Galipienso, Luis Rubio, Luis Aramburu, Jose Velasco, Leonardo Janssen, Dirk |
| author_sort | Galipienso, Luis |
| collection | ReDivia |
| description | The complete genome of a severe isolate of Cucumber vein yellowing virus (CVYV) from Jordan was sequenced. Comparison with the genome of a Spanish CVYV isolate inducing very mild symptoms in cucumber cultivars revealed a nucleotide identity of 94% for the complete genome and an amino acid identity of 96% for the coding region. Comparison of synonymous and non-synonymous substitutions suggested a negative selection at amino acid and nucleotide levels with different degrees depending on the different coding regions. Finally, specific amino acid changes in the zinc finger domain of P1b and in the P1-P3 proteolytic site were found which could be involved in the virulence of CVYV. |
| format | article |
| id | ReDivia5222 |
| institution | Instituto Valenciano de Investigaciones Agrarias (IVIA) |
| language | Inglés |
| publishDate | 2017 |
| publishDateRange | 2017 |
| publishDateSort | 2017 |
| record_format | dspace |
| spelling | ReDivia52222025-04-25T14:45:42Z Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan Galipienso, Luis Rubio, Luis Aramburu, Jose Velasco, Leonardo Janssen, Dirk The complete genome of a severe isolate of Cucumber vein yellowing virus (CVYV) from Jordan was sequenced. Comparison with the genome of a Spanish CVYV isolate inducing very mild symptoms in cucumber cultivars revealed a nucleotide identity of 94% for the complete genome and an amino acid identity of 96% for the coding region. Comparison of synonymous and non-synonymous substitutions suggested a negative selection at amino acid and nucleotide levels with different degrees depending on the different coding regions. Finally, specific amino acid changes in the zinc finger domain of P1b and in the P1-P3 proteolytic site were found which could be involved in the virulence of CVYV. 2017-06-01T10:11:55Z 2017-06-01T10:11:55Z 2012 JUN 2012 article Galipienso, L., Rubio, L., Aramburu, J., Velasco, L., Janssen, D. (2012). Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan. Archives of Virology, 157(6), 1189-1192. 0304-8608 http://hdl.handle.net/20.500.11939/5222 10.1007/s00705-012-1264-4 en openAccess Impreso |
| spellingShingle | Galipienso, Luis Rubio, Luis Aramburu, Jose Velasco, Leonardo Janssen, Dirk Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan |
| title | Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan |
| title_full | Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan |
| title_fullStr | Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan |
| title_full_unstemmed | Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan |
| title_short | Complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from Jordan |
| title_sort | complete nucleotide sequence of a severe isolate of cucumber vein yellowing virus from jordan |
| url | http://hdl.handle.net/20.500.11939/5222 |
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