Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies
Estimation of allele copy numbers for molecular markers has long been considered a challenge for polyploid species, while this process is essential for most genetic research. With the increasing availability and whole genome coverage of SNP markers, it is important to implement a versatile SNP genot...
| Main Authors: | , , , |
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| Other Authors: | |
| Format: | Objeto de conferencia |
| Language: | Inglés |
| Published: |
2017
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| Online Access: | http://hdl.handle.net/20.500.11939/5072 https://doi.org/10.17660/ActaHortic.2015.1065.53 |
| _version_ | 1855491862417113088 |
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| author | Cuenca, José Aleza, Pablo Navarro, Luis Ollitrault, Patrick |
| author2 | Sabater-Munoz, Beatriz |
| author_browse | Aleza, Pablo Cuenca, José Navarro, Luis Ollitrault, Patrick Sabater-Munoz, Beatriz |
| author_facet | Sabater-Munoz, Beatriz Cuenca, José Aleza, Pablo Navarro, Luis Ollitrault, Patrick |
| author_sort | Cuenca, José |
| collection | ReDivia |
| description | Estimation of allele copy numbers for molecular markers has long been considered a challenge for polyploid species, while this process is essential for most genetic research. With the increasing availability and whole genome coverage of SNP markers, it is important to implement a versatile SNP genotyping method to efficiently assign allelic configuration in polyploids. This work demonstrates the usefulness of the KASPar method, based on competitive allele-specific PCR, for the assignment of SNP allelic configuration in an efficient, accurate, simple, and cost effective way and it has been successfully applied in genotyping citrus triploids. |
| format | Objeto de conferencia |
| id | ReDivia5072 |
| institution | Instituto Valenciano de Investigaciones Agrarias (IVIA) |
| language | Inglés |
| publishDate | 2017 |
| publishDateRange | 2017 |
| publishDateSort | 2017 |
| record_format | dspace |
| spelling | ReDivia50722025-04-25T14:53:53Z Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies Acta Horticulturae Cuenca, José Aleza, Pablo Navarro, Luis Ollitrault, Patrick Sabater-Munoz, Beatriz Estimation of allele copy numbers for molecular markers has long been considered a challenge for polyploid species, while this process is essential for most genetic research. With the increasing availability and whole genome coverage of SNP markers, it is important to implement a versatile SNP genotyping method to efficiently assign allelic configuration in polyploids. This work demonstrates the usefulness of the KASPar method, based on competitive allele-specific PCR, for the assignment of SNP allelic configuration in an efficient, accurate, simple, and cost effective way and it has been successfully applied in genotyping citrus triploids. 2017-06-01T10:11:39Z 2017-06-01T10:11:39Z 2015 2015 conferenceObject José Cuenca, Pablo Aleza, Luis Navarro and Patrick Ollitrault (2015). Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies. Acta Hortic. 1065, 433-438 0567-7572; 978-94-62610-53-8 http://hdl.handle.net/20.500.11939/5072 https://doi.org/10.17660/ActaHortic.2015.1065.53 en openAccess Impreso |
| spellingShingle | Cuenca, José Aleza, Pablo Navarro, Luis Ollitrault, Patrick Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies |
| title | Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies |
| title_full | Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies |
| title_fullStr | Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies |
| title_full_unstemmed | Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies |
| title_short | Assignment of SNP Allelic Configuration in Polyploids Using Competitive Allele-Specific PCR: Application to Citrus Triploid Progenies |
| title_sort | assignment of snp allelic configuration in polyploids using competitive allele specific pcr application to citrus triploid progenies |
| url | http://hdl.handle.net/20.500.11939/5072 https://doi.org/10.17660/ActaHortic.2015.1065.53 |
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