Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina
A rhabdovirus infecting maize and wheat crops in Argentina was molecularly characterized. Through next-generation sequencing (NGS) of symptomatic leaf samples, the complete genome was obtained of two isolates of maize yellow striate virus (MYSV), a putative new rhabdovirus, differing by only 0.4% at...
| Autores principales: | , , , , , , , , |
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| Formato: | Artículo |
| Lenguaje: | Inglés |
| Publicado: |
Springer
2018
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| Materias: | |
| Acceso en línea: | https://link.springer.com/article/10.1007%2Fs00705-017-3579-7 http://hdl.handle.net/20.500.12123/3627 https://doi.org/10.1007/s00705-017-3579-7 |
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| author | Maurino, Maria Fernanda Dumon, Analia Delina Llauger, Gabriela Alemandri, Vanina Maria De Haro, Luis Alejandro Mattio, Maria Fernanda Del Vas, Mariana Laguna, Irma Graciela Gimenez Pecci, Maria De La Paz |
| author_browse | Alemandri, Vanina Maria De Haro, Luis Alejandro Del Vas, Mariana Dumon, Analia Delina Gimenez Pecci, Maria De La Paz Laguna, Irma Graciela Llauger, Gabriela Mattio, Maria Fernanda Maurino, Maria Fernanda |
| author_facet | Maurino, Maria Fernanda Dumon, Analia Delina Llauger, Gabriela Alemandri, Vanina Maria De Haro, Luis Alejandro Mattio, Maria Fernanda Del Vas, Mariana Laguna, Irma Graciela Gimenez Pecci, Maria De La Paz |
| author_sort | Maurino, Maria Fernanda |
| collection | INTA Digital |
| description | A rhabdovirus infecting maize and wheat crops in Argentina was molecularly characterized. Through next-generation sequencing (NGS) of symptomatic leaf samples, the complete genome was obtained of two isolates of maize yellow striate virus (MYSV), a putative new rhabdovirus, differing by only 0.4% at the nucleotide level. The MYSV genome consists of 12,654 nucleotides for maize and wheat virus isolates, and shares 71% nucleotide sequence identity with the complete genome of barley yellow striate mosaic virus (BYSMV, NC028244). Ten open reading frames (ORFs) were predicted in the MYSV genome from the antigenomic strand and were compared with their BYSMV counterparts. The highest amino acid sequence identity of the MYSV and BYSMV proteins was 80% between the L proteins, and the lowest was 37% between the proteins 4. Phylogenetic analysis suggested that the MYSV isolates are new members of the genus Cytorhabdovirus, family Rhabdoviridae. Yellow striate, affecting maize and wheat crops in Argentina, is an emergent disease that presents a potential economic risk for these widely distributed crops. |
| format | Artículo |
| id | INTA3627 |
| institution | Instituto Nacional de Tecnología Agropecuaria (INTA -Argentina) |
| language | Inglés |
| publishDate | 2018 |
| publishDateRange | 2018 |
| publishDateSort | 2018 |
| publisher | Springer |
| publisherStr | Springer |
| record_format | dspace |
| spelling | INTA36272019-01-14T17:22:56Z Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina Maurino, Maria Fernanda Dumon, Analia Delina Llauger, Gabriela Alemandri, Vanina Maria De Haro, Luis Alejandro Mattio, Maria Fernanda Del Vas, Mariana Laguna, Irma Graciela Gimenez Pecci, Maria De La Paz Maize Streak Geminivirus Genomes Crops Maize Wheat Geminivirus del Estriado del Maíz Genomas Cultivos Maíz Zea mays Trigo Triticum Plant rhabdoviruses Rhabdovirus de las plantas Argentina A rhabdovirus infecting maize and wheat crops in Argentina was molecularly characterized. Through next-generation sequencing (NGS) of symptomatic leaf samples, the complete genome was obtained of two isolates of maize yellow striate virus (MYSV), a putative new rhabdovirus, differing by only 0.4% at the nucleotide level. The MYSV genome consists of 12,654 nucleotides for maize and wheat virus isolates, and shares 71% nucleotide sequence identity with the complete genome of barley yellow striate mosaic virus (BYSMV, NC028244). Ten open reading frames (ORFs) were predicted in the MYSV genome from the antigenomic strand and were compared with their BYSMV counterparts. The highest amino acid sequence identity of the MYSV and BYSMV proteins was 80% between the L proteins, and the lowest was 37% between the proteins 4. Phylogenetic analysis suggested that the MYSV isolates are new members of the genus Cytorhabdovirus, family Rhabdoviridae. Yellow striate, affecting maize and wheat crops in Argentina, is an emergent disease that presents a potential economic risk for these widely distributed crops. Instituto de Biotecnología Fil: Maurino, María Fernanda. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Dumon, Analia Delina Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina Fil: Llauger, Gabriela. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina Fil: Alemandri, Vanina. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina Fil: De Haro, Luis Alejandro. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Mattio, Maria Fernanda. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina Fil: Del Vas, Mariana. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Laguna, Irma Graciela. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Gimenez Pecci, María de la Paz. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina 2018-10-18T13:01:29Z 2018-10-18T13:01:29Z 2018-01 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion https://link.springer.com/article/10.1007%2Fs00705-017-3579-7 http://hdl.handle.net/20.500.12123/3627 1432-8798 https://doi.org/10.1007/s00705-017-3579-7 eng info:eu-repograntAgreement/INTA/PNPV/1135022/AR./Identificación y desarrollo de protocolos para la detección de patógenos de importancia agrícola. info:eu-repo/semantics/restrictedAccess application/pdf Springer Archives of Virology 163 (1): 291–295 (Enero 2018) |
| spellingShingle | Maize Streak Geminivirus Genomes Crops Maize Wheat Geminivirus del Estriado del Maíz Genomas Cultivos Maíz Zea mays Trigo Triticum Plant rhabdoviruses Rhabdovirus de las plantas Argentina Maurino, Maria Fernanda Dumon, Analia Delina Llauger, Gabriela Alemandri, Vanina Maria De Haro, Luis Alejandro Mattio, Maria Fernanda Del Vas, Mariana Laguna, Irma Graciela Gimenez Pecci, Maria De La Paz Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina |
| title | Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina |
| title_full | Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina |
| title_fullStr | Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina |
| title_full_unstemmed | Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina |
| title_short | Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina |
| title_sort | complete genome sequence of maize yellow striate virus a new cytorhabdovirus infecting maize and wheat crops in argentina |
| topic | Maize Streak Geminivirus Genomes Crops Maize Wheat Geminivirus del Estriado del Maíz Genomas Cultivos Maíz Zea mays Trigo Triticum Plant rhabdoviruses Rhabdovirus de las plantas Argentina |
| url | https://link.springer.com/article/10.1007%2Fs00705-017-3579-7 http://hdl.handle.net/20.500.12123/3627 https://doi.org/10.1007/s00705-017-3579-7 |
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