A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation
Purple carrots accumulate large quantities of anthocyanins in their roots and leaves. These flavonoid pigments possess antioxidant activity and are implicated in providing health benefits. Informative, saturated linkage maps associated with well characterized populations segregating for anthocyanin...
| Autores principales: | , , , , , , |
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| Formato: | Artículo |
| Lenguaje: | Inglés |
| Publicado: |
2018
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| Materias: | |
| Acceso en línea: | https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-1118 http://hdl.handle.net/20.500.12123/2084 https://doi.org/10.1186/1471-2164-15-1118 |
| _version_ | 1855482991342518272 |
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| author | Cavagnaro, Pablo Iorizzo, Massimo Yildiz, Mehtap Senalik, Douglas A. Parsons, Joshua Ellison, Shelby L. Simon, Philipp W. |
| author_browse | Cavagnaro, Pablo Ellison, Shelby L. Iorizzo, Massimo Parsons, Joshua Senalik, Douglas A. Simon, Philipp W. Yildiz, Mehtap |
| author_facet | Cavagnaro, Pablo Iorizzo, Massimo Yildiz, Mehtap Senalik, Douglas A. Parsons, Joshua Ellison, Shelby L. Simon, Philipp W. |
| author_sort | Cavagnaro, Pablo |
| collection | INTA Digital |
| description | Purple carrots accumulate large quantities of anthocyanins in their roots and leaves. These flavonoid pigments possess antioxidant activity and are implicated in providing health benefits. Informative, saturated linkage maps associated with well characterized populations segregating for anthocyanin pigmentation have not been developed. To investigate the genetic architecture conditioning anthocyanin pigmentation we scored root color visually, quantified root anthocyanin pigments by high performance liquid chromatography in segregating F2, F3 and F4 generations of a mapping population, mapped quantitative trait loci (QTL) onto a dense gene-derived single nucleotide polymorphism (SNP)-based linkage map, and performed comparative trait mapping with two unrelated populations. |
| format | Artículo |
| id | INTA2084 |
| institution | Instituto Nacional de Tecnología Agropecuaria (INTA -Argentina) |
| language | Inglés |
| publishDate | 2018 |
| publishDateRange | 2018 |
| publishDateSort | 2018 |
| record_format | dspace |
| spelling | INTA20842018-08-30T16:26:57Z A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation Cavagnaro, Pablo Iorizzo, Massimo Yildiz, Mehtap Senalik, Douglas A. Parsons, Joshua Ellison, Shelby L. Simon, Philipp W. Zanahoria Genomas Loci de Rasgos Cuantitativos Antocianinas Pigmentación Carrots Genomes Quantitative Trait Loci Anthocyanins Pigmentation QTL Purple carrots accumulate large quantities of anthocyanins in their roots and leaves. These flavonoid pigments possess antioxidant activity and are implicated in providing health benefits. Informative, saturated linkage maps associated with well characterized populations segregating for anthocyanin pigmentation have not been developed. To investigate the genetic architecture conditioning anthocyanin pigmentation we scored root color visually, quantified root anthocyanin pigments by high performance liquid chromatography in segregating F2, F3 and F4 generations of a mapping population, mapped quantitative trait loci (QTL) onto a dense gene-derived single nucleotide polymorphism (SNP)-based linkage map, and performed comparative trait mapping with two unrelated populations. EEA La Consulta Fil: Cavagnaro, Pablo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria La Consulta; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias; Argentina. University of Wisconsin. Department of Horticulture; Estados Unidos Fil: Iorizzo, Massimo. University of Wisconsin. Department of Horticulture; Estados Unidos. Fil: Yildiz, Mehtap. Yuzuncu Yil University. Faculty of Agriculture. Department of Agricultural Biotechnology; Turquía Fil: Senalik, Douglas. University of Wisconsin. Department of Horticulture; Estados Unidos. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados Unidos Fil: Parsons, Joshua. University of Wisconsin. Department of Horticulture; Estados Unidos Fil: Ellison, Shelby. University of Wisconsin. Department of Horticulture; Estados Unidos Fil: Simon, Philipp. University of Wisconsin. Department of Horticulture; Estados Unidos. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados Unidos 2018-03-20T14:35:13Z 2018-03-20T14:35:13Z 2014-12 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-1118 http://hdl.handle.net/20.500.12123/2084 1471-2164 https://doi.org/10.1186/1471-2164-15-1118 eng info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) application/pdf BMC Genomics 15 : 1118 (December 2014) |
| spellingShingle | Zanahoria Genomas Loci de Rasgos Cuantitativos Antocianinas Pigmentación Carrots Genomes Quantitative Trait Loci Anthocyanins Pigmentation QTL Cavagnaro, Pablo Iorizzo, Massimo Yildiz, Mehtap Senalik, Douglas A. Parsons, Joshua Ellison, Shelby L. Simon, Philipp W. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
| title | A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
| title_full | A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
| title_fullStr | A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
| title_full_unstemmed | A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
| title_short | A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
| title_sort | gene derived snp based high resolution linkage map of carrot including the location of qtl conditioning root and leaf anthocyanin pigmentation |
| topic | Zanahoria Genomas Loci de Rasgos Cuantitativos Antocianinas Pigmentación Carrots Genomes Quantitative Trait Loci Anthocyanins Pigmentation QTL |
| url | https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-1118 http://hdl.handle.net/20.500.12123/2084 https://doi.org/10.1186/1471-2164-15-1118 |
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