Phenobook : an open source software for phenotypic data collection
Background: Research projects often involve observation, registration, and data processing starting from information obtained in field experiments. In many cases, these tasks are carried out by several persons in different places, times, and ways, adding different levels of complexity and error in d...
| Main Authors: | , , , , , |
|---|---|
| Format: | info:ar-repo/semantics/artículo |
| Language: | Inglés |
| Published: |
2017
|
| Subjects: | |
| Online Access: | http://hdl.handle.net/20.500.12123/1732 https://academic.oup.com/gigascience/article-lookup/doi/10.1093/gigascience/giw019 https://doi.org/10.1093/gigascience/giw019 |
| _version_ | 1855034846066245632 |
|---|---|
| author | Crescente, Juan Manuel Guidobaldi, Fabio Demichelis, Melina Formica, Maria Beatriz Helguera, Marcelo Vanzetti, Leonardo Sebastian |
| author_browse | Crescente, Juan Manuel Demichelis, Melina Formica, Maria Beatriz Guidobaldi, Fabio Helguera, Marcelo Vanzetti, Leonardo Sebastian |
| author_facet | Crescente, Juan Manuel Guidobaldi, Fabio Demichelis, Melina Formica, Maria Beatriz Helguera, Marcelo Vanzetti, Leonardo Sebastian |
| author_sort | Crescente, Juan Manuel |
| collection | INTA Digital |
| description | Background: Research projects often involve observation, registration, and data processing starting from information obtained in field experiments. In many cases, these tasks are carried out by several persons in different places, times, and ways, adding different levels of complexity and error in data collecting. Furthermore, data processing can be time consuming, and input errors may produce unwanted results.
Results: We have developed a novel, open source software called Phenobook, an easy, flexible, and intuitive tool to organize, collect, and save experimental data for further analyses. Phenobook was conceived to collect phenotypic observations in a user-friendly, cost-effective way. It consists of a web-based software for experiment design, data input and visualization, and exportation, combined with a mobile application for remote data collecting. We provide in this article a detailed description of the developed tool.
Conclusion: Phenobook is a software tool that can be easily implemented in collaborative research and development projects involving data collecting and forward analyses. Adopting Phenobook is expected to improve the involved processes by minimizing input errors, resulting in higher quality and reliability of the research outcomes |
| format | info:ar-repo/semantics/artículo |
| id | INTA1732 |
| institution | Instituto Nacional de Tecnología Agropecuaria (INTA -Argentina) |
| language | Inglés |
| publishDate | 2017 |
| publishDateRange | 2017 |
| publishDateSort | 2017 |
| record_format | dspace |
| spelling | INTA17322017-11-14T16:44:20Z Phenobook : an open source software for phenotypic data collection Crescente, Juan Manuel Guidobaldi, Fabio Demichelis, Melina Formica, Maria Beatriz Helguera, Marcelo Vanzetti, Leonardo Sebastian Fenotipos Colección de Datos Desarrollo de Programas Phenotypes Data Collection Software Development Background: Research projects often involve observation, registration, and data processing starting from information obtained in field experiments. In many cases, these tasks are carried out by several persons in different places, times, and ways, adding different levels of complexity and error in data collecting. Furthermore, data processing can be time consuming, and input errors may produce unwanted results. Results: We have developed a novel, open source software called Phenobook, an easy, flexible, and intuitive tool to organize, collect, and save experimental data for further analyses. Phenobook was conceived to collect phenotypic observations in a user-friendly, cost-effective way. It consists of a web-based software for experiment design, data input and visualization, and exportation, combined with a mobile application for remote data collecting. We provide in this article a detailed description of the developed tool. Conclusion: Phenobook is a software tool that can be easily implemented in collaborative research and development projects involving data collecting and forward analyses. Adopting Phenobook is expected to improve the involved processes by minimizing input errors, resulting in higher quality and reliability of the research outcomes Fil: Crescente, Juan Manuel. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez. Grupo Biotecnología y Recursos Genéticos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Guidobaldi, Fabio. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez. Grupo Biotecnología y Recursos Genéticos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Demichelis, Melina. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez. Grupo Biotecnología y Recursos Genéticos; Argentina Fil: Formica, Maria Beatriz. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez. Grupo Biotecnología y Recursos Genéticos; Argentina Fil: Helguera, Marcelo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez. Grupo Biotecnología y Recursos Genéticos; Argentina Fil: Vanzetti, Leonardo Sebastian. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez. Grupo Biotecnología y Recursos Genéticos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina 2017-11-09T14:12:56Z 2017-11-09T14:12:56Z 2017-04 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://hdl.handle.net/20.500.12123/1732 https://academic.oup.com/gigascience/article-lookup/doi/10.1093/gigascience/giw019 2047-217X https://doi.org/10.1093/gigascience/giw019 eng info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) application/pdf GigaScience 6 (4) : 1–5 (April 2017) |
| spellingShingle | Fenotipos Colección de Datos Desarrollo de Programas Phenotypes Data Collection Software Development Crescente, Juan Manuel Guidobaldi, Fabio Demichelis, Melina Formica, Maria Beatriz Helguera, Marcelo Vanzetti, Leonardo Sebastian Phenobook : an open source software for phenotypic data collection |
| title | Phenobook : an open source software for phenotypic data collection |
| title_full | Phenobook : an open source software for phenotypic data collection |
| title_fullStr | Phenobook : an open source software for phenotypic data collection |
| title_full_unstemmed | Phenobook : an open source software for phenotypic data collection |
| title_short | Phenobook : an open source software for phenotypic data collection |
| title_sort | phenobook an open source software for phenotypic data collection |
| topic | Fenotipos Colección de Datos Desarrollo de Programas Phenotypes Data Collection Software Development |
| url | http://hdl.handle.net/20.500.12123/1732 https://academic.oup.com/gigascience/article-lookup/doi/10.1093/gigascience/giw019 https://doi.org/10.1093/gigascience/giw019 |
| work_keys_str_mv | AT crescentejuanmanuel phenobookanopensourcesoftwareforphenotypicdatacollection AT guidobaldifabio phenobookanopensourcesoftwareforphenotypicdatacollection AT demichelismelina phenobookanopensourcesoftwareforphenotypicdatacollection AT formicamariabeatriz phenobookanopensourcesoftwareforphenotypicdatacollection AT helgueramarcelo phenobookanopensourcesoftwareforphenotypicdatacollection AT vanzettileonardosebastian phenobookanopensourcesoftwareforphenotypicdatacollection |