Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions

Despite the vast screening for natural nitrogenfixing isolates by public and private consortia, no significant progresses in the production of improved nitrogenfixing inoculants for alfalfa production have been made in the last years. Here, we present a comprehensive characterization of the nitrogen...

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Main Authors: Jozefkowicz, Cintia, Brambilla, Silvina Maricel, Frare, Romina Alejandra, Stritzler, Margarita, Puente, Mariana Laura, Piccinetti, Carlos Fabian, Soto, Gabriela Cinthia, Ayub, Nicolás Daniel
Format: Artículo
Language:Inglés
Published: 2017
Subjects:
Online Access:http://hdl.handle.net/20.500.12123/1474
https://link.springer.com/article/10.1007/s00239-017-9808-6
https://doi.org/10.1007/s00239-017-9808-6
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author Jozefkowicz, Cintia
Brambilla, Silvina Maricel
Frare, Romina Alejandra
Stritzler, Margarita
Puente, Mariana Laura
Piccinetti, Carlos Fabian
Soto, Gabriela Cinthia
Ayub, Nicolás Daniel
author_browse Ayub, Nicolás Daniel
Brambilla, Silvina Maricel
Frare, Romina Alejandra
Jozefkowicz, Cintia
Piccinetti, Carlos Fabian
Puente, Mariana Laura
Soto, Gabriela Cinthia
Stritzler, Margarita
author_facet Jozefkowicz, Cintia
Brambilla, Silvina Maricel
Frare, Romina Alejandra
Stritzler, Margarita
Puente, Mariana Laura
Piccinetti, Carlos Fabian
Soto, Gabriela Cinthia
Ayub, Nicolás Daniel
author_sort Jozefkowicz, Cintia
collection INTA Digital
description Despite the vast screening for natural nitrogenfixing isolates by public and private consortia, no significant progresses in the production of improved nitrogenfixing inoculants for alfalfa production have been made in the last years. Here, we present a comprehensive characterization of the nitrogen-fixing strain Ensifer meliloti B399 (originally named Rhizobium meliloti 102F34), probably the inoculant most widely used in alfalfa production since the 1960s. Complete nucleotide sequence and genome analysis of strain B399 showed that the three replicons present in this commercial strain and the model bacterium Ensifer meliloti 1021 are extremely similar to each other in terms of nucleotide identity and synteny conservation. In contrast to that observed in B399-treated plants, inoculation of plants with strain 1021 did not improve nitrogen content in different alfalfa cultivars under field conditions, suggesting that a small genomic divergence can drastically impact on the symbiotic phenotype. Therefore, in addition to the traditional screening of natural nitrogen-fixing isolates, the genome engineering of model strains could be an attractive strategy to improve nitrogen fixation in legume crops.
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institution Instituto Nacional de Tecnología Agropecuaria (INTA -Argentina)
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spelling INTA14742018-03-07T13:51:37Z Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions Jozefkowicz, Cintia Brambilla, Silvina Maricel Frare, Romina Alejandra Stritzler, Margarita Puente, Mariana Laura Piccinetti, Carlos Fabian Soto, Gabriela Cinthia Ayub, Nicolás Daniel Genética Leguminosas Rhizobium Genomas Divergencia Genética Genetics Legumes Genomes Genetic Divergence Despite the vast screening for natural nitrogenfixing isolates by public and private consortia, no significant progresses in the production of improved nitrogenfixing inoculants for alfalfa production have been made in the last years. Here, we present a comprehensive characterization of the nitrogen-fixing strain Ensifer meliloti B399 (originally named Rhizobium meliloti 102F34), probably the inoculant most widely used in alfalfa production since the 1960s. Complete nucleotide sequence and genome analysis of strain B399 showed that the three replicons present in this commercial strain and the model bacterium Ensifer meliloti 1021 are extremely similar to each other in terms of nucleotide identity and synteny conservation. In contrast to that observed in B399-treated plants, inoculation of plants with strain 1021 did not improve nitrogen content in different alfalfa cultivars under field conditions, suggesting that a small genomic divergence can drastically impact on the symbiotic phenotype. Therefore, in addition to the traditional screening of natural nitrogen-fixing isolates, the genome engineering of model strains could be an attractive strategy to improve nitrogen fixation in legume crops. Inst. de Microbiología y Zoología Agrícola IMyZA Fil: Jozefkowicz, Cintia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética "Ewald A. Favret"; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Brambilla, Silvina Maricel. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética "Ewald A. Favret"; Argentina Fil: Frare, Romina Alejandra. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética "Ewald A. Favret"; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Stritzler, Margarita. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética "Ewald A. Favret"; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Puente, Mariana Laura. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Microbiología y Zoología Agrícola; Argentina Fil: Piccinetti, Carlos Fabian. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Microbiología y Zoología Agrícola; Argentina Fil: Soto, Gabriela Cinthia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética "Ewald A. Favret"; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Ayub, Nicolás Daniel. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética "Ewald A. Favret"; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina 2017-10-12T13:28:05Z 2017-10-12T13:28:05Z 2017-08 info:eu-repo/semantics/article info:ar-repo/semantics/artículo info:eu-repo/semantics/acceptedVersion http://hdl.handle.net/20.500.12123/1474 https://link.springer.com/article/10.1007/s00239-017-9808-6 0022-2844 (Print) 1432-1432 (Online) https://doi.org/10.1007/s00239-017-9808-6 eng info:eu-repo/semantics/restrictedAccess application/pdf Journal of molecular evolution 85 (3-4) : 79–83 (October 2017)
spellingShingle Genética
Leguminosas
Rhizobium
Genomas
Divergencia Genética
Genetics
Legumes
Genomes
Genetic Divergence
Jozefkowicz, Cintia
Brambilla, Silvina Maricel
Frare, Romina Alejandra
Stritzler, Margarita
Puente, Mariana Laura
Piccinetti, Carlos Fabian
Soto, Gabriela Cinthia
Ayub, Nicolás Daniel
Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions
title Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions
title_full Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions
title_fullStr Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions
title_full_unstemmed Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions
title_short Microevolution rather than large genome divergence determines the effectiveness of legume–rhizobia symbiotic interaction under field conditions
title_sort microevolution rather than large genome divergence determines the effectiveness of legume rhizobia symbiotic interaction under field conditions
topic Genética
Leguminosas
Rhizobium
Genomas
Divergencia Genética
Genetics
Legumes
Genomes
Genetic Divergence
url http://hdl.handle.net/20.500.12123/1474
https://link.springer.com/article/10.1007/s00239-017-9808-6
https://doi.org/10.1007/s00239-017-9808-6
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