Updated guidelines for gene nomenclature in wheat
The last decade has seen a proliferation in genomic resources for wheat, including reference- and pan-genome assemblies with gene annotations, which provide new opportunities to detect, characterise, and describe genes that influence traits of interest. The expansion of genetic information has suppo...
| Main Authors: | , , , , , , , , , , , |
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| Format: | Artículo |
| Language: | Inglés |
| Published: |
Springer Nature
2023
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| Subjects: | |
| Online Access: | http://hdl.handle.net/20.500.12123/14438 https://link.springer.com/article/10.1007/s00122-023-04253-w https://doi.org/10.1007/s00122-023-04253-w |
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| author | Boden, S.A. McIntosh, R.A. Uauy, C. Krattinger, S.G. Dubcovsky, Jorge Rogers, W.J. Xia, X.C. Badaeva, E.D. Bentley, A.R. Brown-Guedira, G. Gonzalez, Fernanda Gabriela Zhang, Y. |
| author_browse | Badaeva, E.D. Bentley, A.R. Boden, S.A. Brown-Guedira, G. Dubcovsky, Jorge Gonzalez, Fernanda Gabriela Krattinger, S.G. McIntosh, R.A. Rogers, W.J. Uauy, C. Xia, X.C. Zhang, Y. |
| author_facet | Boden, S.A. McIntosh, R.A. Uauy, C. Krattinger, S.G. Dubcovsky, Jorge Rogers, W.J. Xia, X.C. Badaeva, E.D. Bentley, A.R. Brown-Guedira, G. Gonzalez, Fernanda Gabriela Zhang, Y. |
| author_sort | Boden, S.A. |
| collection | INTA Digital |
| description | The last decade has seen a proliferation in genomic resources for wheat, including reference- and pan-genome assemblies with gene annotations, which provide new opportunities to detect, characterise, and describe genes that influence traits of interest. The expansion of genetic information has supported growth of the wheat research community and catalysed strong interest in the genes that control agronomically important traits, such as yield, pathogen resistance, grain quality, and abiotic stress tolerance. To accommodate these developments, we present an updated set of guidelines for gene nomenclature in wheat. These guidelines can be used to describe loci identified based on morphological or phenotypic features or to name genes based on sequence information, such as similarity to genes characterised in other species or the biochemical properties of the encoded protein. The updated guidelines provide a flexible system that is not overly prescriptive but provides structure and a common framework for naming genes in wheat, which may be extended to related cereal species. We propose these guidelines be used henceforth by the wheat research community to facilitate integration of data from independent studies and allow broader and more efficient use of text and data mining approaches, which will ultimately help further accelerate wheat research and breeding. |
| format | Artículo |
| id | INTA14438 |
| institution | Instituto Nacional de Tecnología Agropecuaria (INTA -Argentina) |
| language | Inglés |
| publishDate | 2023 |
| publishDateRange | 2023 |
| publishDateSort | 2023 |
| publisher | Springer Nature |
| publisherStr | Springer Nature |
| record_format | dspace |
| spelling | INTA144382023-04-11T11:56:32Z Updated guidelines for gene nomenclature in wheat Boden, S.A. McIntosh, R.A. Uauy, C. Krattinger, S.G. Dubcovsky, Jorge Rogers, W.J. Xia, X.C. Badaeva, E.D. Bentley, A.R. Brown-Guedira, G. Gonzalez, Fernanda Gabriela Zhang, Y. Trigo Nomenclatura Rendimiento Calidad de las Semillas Mejora Genética Wheat Nomenclature Genes Yields Seed Quality Genetic Gain The last decade has seen a proliferation in genomic resources for wheat, including reference- and pan-genome assemblies with gene annotations, which provide new opportunities to detect, characterise, and describe genes that influence traits of interest. The expansion of genetic information has supported growth of the wheat research community and catalysed strong interest in the genes that control agronomically important traits, such as yield, pathogen resistance, grain quality, and abiotic stress tolerance. To accommodate these developments, we present an updated set of guidelines for gene nomenclature in wheat. These guidelines can be used to describe loci identified based on morphological or phenotypic features or to name genes based on sequence information, such as similarity to genes characterised in other species or the biochemical properties of the encoded protein. The updated guidelines provide a flexible system that is not overly prescriptive but provides structure and a common framework for naming genes in wheat, which may be extended to related cereal species. We propose these guidelines be used henceforth by the wheat research community to facilitate integration of data from independent studies and allow broader and more efficient use of text and data mining approaches, which will ultimately help further accelerate wheat research and breeding. EEA Pergamino Fil: Boden, S. A. University of Adelaide. Waite Research Institute. School of Agriculture, Food and Wine; Australia Fil: McIntosh, R .A. University of Sydney. School of Life and Environmental Sciences. Plant Breeding Institute; Australia Fil: Uauy, C. Norwich Research Park. John Innes Centre; Reino Unido Fil: Krattinger, S. G. King Abdullah University of Science and Technology. Biological and Environmental Science and Engineering Division. Plant Science Program; Arabia Saudita Fil: Krattinger, S. G. The Wheat Initiative; Alemania Fil: Dubcovsky, J. University of California. Department of Plant Science; Estados Unidos Fil: Dubcovsky, J. The Wheat Initiative; Alemania Fil: Rogers, W.J. Universidad Nacional del Centro de La Provincia de Buenos Aires. Facultad de Agronomía (CIISAS, CIC-BIOLAB AZUL, CONICET-INBIOTEC, CRESCA). Departamento de Biología Aplicada; Argentina Fil: Rogers, W.J. The Wheat Initiative; Alemania FIL: Xia, X. C. Chinese Academy of Agricultural Sciences. National Wheat Improvement Centre. Institute of Crop Science; China Fil: Badaeva, E. D. Russian Academy of Sciences. N.I. Vavilov Institute of General Genetics; Rusia Fil: Bentley, A. R. International Maize and Wheat Improvement Center (CIMMYT); México Fil: Bentley, A. R. The Wheat Initiative; Alemania Fil: Brown-Guedira, G. North Carolina State University. USDA-ARS Plant Science Research; Estados Unidos Fil: Brown-Guedira, G. The Wheat Initiative; Alemania Fil: González, Fernanda G. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Sección Ecofisiología; Argentina Fil: González, Fernanda G. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires (CITNOBA, CONICET-UNNOBA-UNSADA); Argentina Fil: González, Fernanda G. The Wheat Initiative; Alemania Fil: Zhang, Y. Fudan University. School of Life Sciences. Institute of Plant Biology. Collaborative Innovation Center of Genetics and Development. State Key Laboratory of Genetic Engineering; China 2023-04-11T11:48:07Z 2023-04-11T11:48:07Z 2023-03 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://hdl.handle.net/20.500.12123/14438 https://link.springer.com/article/10.1007/s00122-023-04253-w 0040-5752 1432-2242 (online) https://doi.org/10.1007/s00122-023-04253-w eng info:eu-repograntAgreement/INTA/2019-PD-E3-I060-001/2019-PD-E3-I060-001/AR./Adaptación de los cultivos al cambio climático: Bases ecofisiológicas para el manejo y la mejora genética info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) application/pdf Springer Nature Theoretical and Applied Genetics 136 (4) : 72 (April 2023) |
| spellingShingle | Trigo Nomenclatura Rendimiento Calidad de las Semillas Mejora Genética Wheat Nomenclature Genes Yields Seed Quality Genetic Gain Boden, S.A. McIntosh, R.A. Uauy, C. Krattinger, S.G. Dubcovsky, Jorge Rogers, W.J. Xia, X.C. Badaeva, E.D. Bentley, A.R. Brown-Guedira, G. Gonzalez, Fernanda Gabriela Zhang, Y. Updated guidelines for gene nomenclature in wheat |
| title | Updated guidelines for gene nomenclature in wheat |
| title_full | Updated guidelines for gene nomenclature in wheat |
| title_fullStr | Updated guidelines for gene nomenclature in wheat |
| title_full_unstemmed | Updated guidelines for gene nomenclature in wheat |
| title_short | Updated guidelines for gene nomenclature in wheat |
| title_sort | updated guidelines for gene nomenclature in wheat |
| topic | Trigo Nomenclatura Rendimiento Calidad de las Semillas Mejora Genética Wheat Nomenclature Genes Yields Seed Quality Genetic Gain |
| url | http://hdl.handle.net/20.500.12123/14438 https://link.springer.com/article/10.1007/s00122-023-04253-w https://doi.org/10.1007/s00122-023-04253-w |
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