Cereal Circular RNAs (circRNAs): An Overview of the Computational Resources for Identification and Analysis
Circular RNAs (circRNAs) are a widespread class of endogenous noncoding RNAs and they have been studied in the past few years, implying important biological functions in all kingdoms of life. Recently, circRNAs have been identified in many plant species, including cereal crops, showing differential...
| Autores principales: | , , , , |
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| Formato: | info:ar-repo/semantics/parte de libro |
| Lenguaje: | Inglés |
| Publicado: |
2022
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| Materias: | |
| Acceso en línea: | http://hdl.handle.net/20.500.12123/12913 https://link.springer.com/protocol/10.1007/978-1-4939-9865-4_13 https://doi.org/10.1007/978-1-4939-9865-4_13 |
| _version_ | 1855036843361304576 |
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| author | Vaschetto, Luis Litholdo Jr., Celso Gaspar Sendín, Lorena Noelia Terenti Romero, Claudia Mabel Filippone, Maria Paula |
| author_browse | Filippone, Maria Paula Litholdo Jr., Celso Gaspar Sendín, Lorena Noelia Terenti Romero, Claudia Mabel Vaschetto, Luis |
| author_facet | Vaschetto, Luis Litholdo Jr., Celso Gaspar Sendín, Lorena Noelia Terenti Romero, Claudia Mabel Filippone, Maria Paula |
| author_sort | Vaschetto, Luis |
| collection | INTA Digital |
| description | Circular RNAs (circRNAs) are a widespread class of endogenous noncoding RNAs and they have been studied in the past few years, implying important biological functions in all kingdoms of life. Recently, circRNAs have been identified in many plant species, including cereal crops, showing differential expression during stress response and developmental programs, which suggests their role in these process. In the following years, it is expected that insights into the functional roles of circRNAs can be used by cereal scientists and molecular breeders with the aim to develop new strategies for crop improvement. Here, we briefly outline the current knowledge about circRNAs in plants and we also outline available computational resources for their validation and analysis in cereal species. |
| format | info:ar-repo/semantics/parte de libro |
| id | INTA12913 |
| institution | Instituto Nacional de Tecnología Agropecuaria (INTA -Argentina) |
| language | Inglés |
| publishDate | 2022 |
| publishDateRange | 2022 |
| publishDateSort | 2022 |
| record_format | dspace |
| spelling | INTA129132022-09-19T11:42:08Z Cereal Circular RNAs (circRNAs): An Overview of the Computational Resources for Identification and Analysis Vaschetto, Luis Litholdo Jr., Celso Gaspar Sendín, Lorena Noelia Terenti Romero, Claudia Mabel Filippone, Maria Paula ARN Cereales Cultivos Fitomejoramiento RNA Cereals Crops Plant Breeding ARN Circular Recursos Computacionales Mejoramiento Molecular Circular RNAs (circRNAs) are a widespread class of endogenous noncoding RNAs and they have been studied in the past few years, implying important biological functions in all kingdoms of life. Recently, circRNAs have been identified in many plant species, including cereal crops, showing differential expression during stress response and developmental programs, which suggests their role in these process. In the following years, it is expected that insights into the functional roles of circRNAs can be used by cereal scientists and molecular breeders with the aim to develop new strategies for crop improvement. Here, we briefly outline the current knowledge about circRNAs in plants and we also outline available computational resources for their validation and analysis in cereal species. Los ARN circulares (circRNA) son una clase muy extendida de ARN no codificantes endógenos y se han estudiado en los últimos años, lo que implica importantes funciones biológicas en todos los reinos de la vida. Recientemente, se han identificado circRNAs en muchas especies de plantas, incluidos los cultivos de cereales, que muestran una expresión diferencial durante la respuesta al estrés y los programas de desarrollo, lo que sugiere su papel en estos procesos. En los años siguientes, se espera que los científicos de cereales y los mejoradores moleculares puedan utilizar los conocimientos sobre los roles funcionales de los circRNA con el objetivo de desarrollar nuevas estrategias para la mejora de cultivos. Aquí, describimos brevemente el conocimiento actual sobre circRNAs en plantas y también describimos los recursos computacionales disponibles para su validación y análisis en especies de cereales. Estación Experimental Agropecuaria San Luis, INTA Fil: Vaschetto, Luis. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales; Argentina. South Dakota State University. Agronomy, Horticulture and Plant Science Department; Estados Unidos Fil: Litholdo Jr, Celso Gaspar. Instituto de Tecnología Agroindustrial del Noroeste Argentino. Estación Experimental Agroindustrial Obispo Colombres; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Fil: Sendín,Lorena Noelia.Instituto de Tecnología Agroindustrial del Noroeste Argentino. Estación Experimental Agroindustrial Obispo Colombres; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Fil: Terenti Romero, Claudia Mabel. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria San Luis; Argentina Fil: Filippone, Maria Paula. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. 2022-09-19T11:27:03Z 2022-09-19T11:27:03Z 2019-09-01 info:ar-repo/semantics/parte de libro info:eu-repo/semantics/bookPart info:eu-repo/semantics/publishedVersion http://hdl.handle.net/20.500.12123/12913 https://link.springer.com/protocol/10.1007/978-1-4939-9865-4_13 978-1-4939-9865-4 https://doi.org/10.1007/978-1-4939-9865-4_13 eng info:eu-repo/semantics/restrictedAccess application/pdf Cereal Genomics: Methods and Protocols, Methods in Molecular Biology / editors: Luis M. Vaschetto. Berlin : Springer, 2019. p. 157-163 |
| spellingShingle | ARN Cereales Cultivos Fitomejoramiento RNA Cereals Crops Plant Breeding ARN Circular Recursos Computacionales Mejoramiento Molecular Vaschetto, Luis Litholdo Jr., Celso Gaspar Sendín, Lorena Noelia Terenti Romero, Claudia Mabel Filippone, Maria Paula Cereal Circular RNAs (circRNAs): An Overview of the Computational Resources for Identification and Analysis |
| title | Cereal Circular RNAs (circRNAs): An Overview of the Computational Resources for Identification and Analysis |
| title_full | Cereal Circular RNAs (circRNAs): An Overview of the Computational Resources for Identification and Analysis |
| title_fullStr | Cereal Circular RNAs (circRNAs): An Overview of the Computational Resources for Identification and Analysis |
| title_full_unstemmed | Cereal Circular RNAs (circRNAs): An Overview of the Computational Resources for Identification and Analysis |
| title_short | Cereal Circular RNAs (circRNAs): An Overview of the Computational Resources for Identification and Analysis |
| title_sort | cereal circular rnas circrnas an overview of the computational resources for identification and analysis |
| topic | ARN Cereales Cultivos Fitomejoramiento RNA Cereals Crops Plant Breeding ARN Circular Recursos Computacionales Mejoramiento Molecular |
| url | http://hdl.handle.net/20.500.12123/12913 https://link.springer.com/protocol/10.1007/978-1-4939-9865-4_13 https://doi.org/10.1007/978-1-4939-9865-4_13 |
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