K-mer counting and curated libraries drive efficient annotation of repeats in plant genomes

The annotation of repetitive sequences within plant genomes can help in the interpretation of observed phenotypes. Moreover, repeat masking is required for tasks such as whole-genome alignment, promoter analysis, or pangenome exploration. Although homology-based annotation methods are computationall...

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Bibliographic Details
Main Authors: Contreras-Moreira, Bruno, Filippi, Carla Valeria, Naamati, Guy, García Girón, Carlos, Allen, James E., Flicek, Paul
Format: info:ar-repo/semantics/artículo
Language:Inglés
Published: Wiley 2021
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Online Access:http://hdl.handle.net/20.500.12123/10882
https://acsess.onlinelibrary.wiley.com/doi/full/10.1002/tpg2.20143
https://doi.org/10.1002/tpg2.20143

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