Mycobacterium avium subsp. paratuberculosis (MAP) molecular diversity in cattle, sheep, and goats from Latin America and the Caribbean: a systematic review
This study aimed to systematically collect and appraise the scientific evidence to answer the research question: What MAP genotypes have been isolated from cattle, sheep, and goats in Latin America and the Caribbean? An electronic search was conducted on three platforms (i.e., OVID®, Web of Science®...
| Autores principales: | , , , |
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| Formato: | info:ar-repo/semantics/artículo |
| Lenguaje: | Inglés |
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Springer
2021
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| Materias: | |
| Acceso en línea: | http://hdl.handle.net/20.500.12123/10742 https://link.springer.com/article/10.1007%2Fs11250-021-02923-9 https://doi.org/10.1007/s11250-021-02923-9 |
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| author | Correa-Valencia, Nathalia M. Moyano, Roberto Damian Hernández-Agudelo, Miguel Fernández-Silva, Jorge A. |
| author_browse | Correa-Valencia, Nathalia M. Fernández-Silva, Jorge A. Hernández-Agudelo, Miguel Moyano, Roberto Damian |
| author_facet | Correa-Valencia, Nathalia M. Moyano, Roberto Damian Hernández-Agudelo, Miguel Fernández-Silva, Jorge A. |
| author_sort | Correa-Valencia, Nathalia M. |
| collection | INTA Digital |
| description | This study aimed to systematically collect and appraise the scientific evidence to answer the research question: What MAP genotypes have been isolated from cattle, sheep, and goats in Latin America and the Caribbean? An electronic search was conducted on three platforms (i.e., OVID®, Web of Science®, SciELO) as well as on the proceedings of the International Colloquium on Paratuberculosis. Inclusion and exclusion criteria were defined a priori and conserved through the systematic process and only articles published in peer-reviewed journals were considered. A total of 26 articles met the definitive inclusion criteria. All were published in English, in 15 different journals, and between 1989 and 2020. The relevant articles reported the use of six different genotyping techniques (i.e., polymerase chain reaction-restriction endonuclease analysis, restriction fragment length polymorphism, type-specific-PCR, mycobacterial interspersed repetitive units-variable number of tandem repeats, multi-locus short sequence repeat, single nucleotide polymorphism) in isolates from seven countries. Genotypes found so far in the region using typing techniques were mainly C type. MIRU-VNTR mostly reported INMV 1, INMV 2, and INMV 11 subtypes, among others. MLSSR reported genotypes from four different countries, reporting nine different subtypes of which 7g–10g–4ggt was the most common for loci 1, 2, and 8, respectively. Regardless the high diversity of techniques used so far to genotype Latin American and Caribbean MAP isolates, the original question of this systematic review has been answered. In addition, a relative genetic similarity between MAP strains recovered from cattle, goats, and sheep unrelatedly of the matrix and geographic origin was identified. |
| format | info:ar-repo/semantics/artículo |
| id | INTA10742 |
| institution | Instituto Nacional de Tecnología Agropecuaria (INTA -Argentina) |
| language | Inglés |
| publishDate | 2021 |
| publishDateRange | 2021 |
| publishDateSort | 2021 |
| publisher | Springer |
| publisherStr | Springer |
| record_format | dspace |
| spelling | INTA107422021-11-10T18:16:18Z Mycobacterium avium subsp. paratuberculosis (MAP) molecular diversity in cattle, sheep, and goats from Latin America and the Caribbean: a systematic review Correa-Valencia, Nathalia M. Moyano, Roberto Damian Hernández-Agudelo, Miguel Fernández-Silva, Jorge A. Mycobacterium avium subsp. paratuberculosis Ganado Bovino Ovinos Caprinos Genética América Latina y el Caribe Cattle Sheep Goats Genetics Latin America and the Caribbean This study aimed to systematically collect and appraise the scientific evidence to answer the research question: What MAP genotypes have been isolated from cattle, sheep, and goats in Latin America and the Caribbean? An electronic search was conducted on three platforms (i.e., OVID®, Web of Science®, SciELO) as well as on the proceedings of the International Colloquium on Paratuberculosis. Inclusion and exclusion criteria were defined a priori and conserved through the systematic process and only articles published in peer-reviewed journals were considered. A total of 26 articles met the definitive inclusion criteria. All were published in English, in 15 different journals, and between 1989 and 2020. The relevant articles reported the use of six different genotyping techniques (i.e., polymerase chain reaction-restriction endonuclease analysis, restriction fragment length polymorphism, type-specific-PCR, mycobacterial interspersed repetitive units-variable number of tandem repeats, multi-locus short sequence repeat, single nucleotide polymorphism) in isolates from seven countries. Genotypes found so far in the region using typing techniques were mainly C type. MIRU-VNTR mostly reported INMV 1, INMV 2, and INMV 11 subtypes, among others. MLSSR reported genotypes from four different countries, reporting nine different subtypes of which 7g–10g–4ggt was the most common for loci 1, 2, and 8, respectively. Regardless the high diversity of techniques used so far to genotype Latin American and Caribbean MAP isolates, the original question of this systematic review has been answered. In addition, a relative genetic similarity between MAP strains recovered from cattle, goats, and sheep unrelatedly of the matrix and geographic origin was identified. Instituto de Biotecnología Fil: Correa-Valencia, Nathalia M. Universidad de Antioquia. Facultad de Ciencias Agrarias. Escuela de Medicina Veterinaria; Colombia Fil: Moyano, Roberto Damian. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Agrobiotecnología y Biología Molecular; Argentina Fil: Moyano, Roberto Damian. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Hernández-Agudelo, Miguel. Universidad de Antioquia. Facultad de Ciencias Agrarias. Escuela de Medicina Veterinaria; Colombia Fil: Fernández-Silva, Jorge A. Universidad de Antioquia. Facultad de Ciencias Agrarias. Escuela de Medicina Veterinaria; Colombia 2021-11-10T18:13:50Z 2021-11-10T18:13:50Z 2021-09 info:ar-repo/semantics/artículo info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://hdl.handle.net/20.500.12123/10742 https://link.springer.com/article/10.1007%2Fs11250-021-02923-9 0049-4747 1573-7438 https://doi.org/10.1007/s11250-021-02923-9 eng info:eu-repo/semantics/restrictedAccess application/pdf Springer Tropical Animal Health and Production 53 : article number: 468 (2021) |
| spellingShingle | Mycobacterium avium subsp. paratuberculosis Ganado Bovino Ovinos Caprinos Genética América Latina y el Caribe Cattle Sheep Goats Genetics Latin America and the Caribbean Correa-Valencia, Nathalia M. Moyano, Roberto Damian Hernández-Agudelo, Miguel Fernández-Silva, Jorge A. Mycobacterium avium subsp. paratuberculosis (MAP) molecular diversity in cattle, sheep, and goats from Latin America and the Caribbean: a systematic review |
| title | Mycobacterium avium subsp. paratuberculosis (MAP) molecular diversity in cattle, sheep, and goats from Latin America and the Caribbean: a systematic review |
| title_full | Mycobacterium avium subsp. paratuberculosis (MAP) molecular diversity in cattle, sheep, and goats from Latin America and the Caribbean: a systematic review |
| title_fullStr | Mycobacterium avium subsp. paratuberculosis (MAP) molecular diversity in cattle, sheep, and goats from Latin America and the Caribbean: a systematic review |
| title_full_unstemmed | Mycobacterium avium subsp. paratuberculosis (MAP) molecular diversity in cattle, sheep, and goats from Latin America and the Caribbean: a systematic review |
| title_short | Mycobacterium avium subsp. paratuberculosis (MAP) molecular diversity in cattle, sheep, and goats from Latin America and the Caribbean: a systematic review |
| title_sort | mycobacterium avium subsp paratuberculosis map molecular diversity in cattle sheep and goats from latin america and the caribbean a systematic review |
| topic | Mycobacterium avium subsp. paratuberculosis Ganado Bovino Ovinos Caprinos Genética América Latina y el Caribe Cattle Sheep Goats Genetics Latin America and the Caribbean |
| url | http://hdl.handle.net/20.500.12123/10742 https://link.springer.com/article/10.1007%2Fs11250-021-02923-9 https://doi.org/10.1007/s11250-021-02923-9 |
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