Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd
This study provides a comprehensive mitochondrial genome sequence and a phylogenetic analysis of Jakumaru (Bos taurus), a prominent bull from a Peruvian breeding program. The mitochondrial genome, spanning 16,340bp, comprises 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes, with a GC conten...
| Main Authors: | , , , , , , , |
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| Format: | Artículo |
| Language: | Inglés |
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Unique Scientific Publishers
2025
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| Subjects: | |
| Online Access: | http://hdl.handle.net/20.500.12955/2647 https://doi.org/10.47278/journal.ijvs/2024.007 |
| _version_ | 1855490257666965504 |
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| author | Estrada Cañari, Richard Romero Avila, Yolanda Madelein Figueroa Venegas, Deyanira Antonella Quilcate Pairazamán, Carlos Enrique León Trinidad, Silvia Eliana Casanova Nuñez Melgar, David pavel Maicelo, Jorge L. Arbizu, Carlos I. |
| author_browse | Arbizu, Carlos I. Casanova Nuñez Melgar, David pavel Estrada Cañari, Richard Figueroa Venegas, Deyanira Antonella León Trinidad, Silvia Eliana Maicelo, Jorge L. Quilcate Pairazamán, Carlos Enrique Romero Avila, Yolanda Madelein |
| author_facet | Estrada Cañari, Richard Romero Avila, Yolanda Madelein Figueroa Venegas, Deyanira Antonella Quilcate Pairazamán, Carlos Enrique León Trinidad, Silvia Eliana Casanova Nuñez Melgar, David pavel Maicelo, Jorge L. Arbizu, Carlos I. |
| author_sort | Estrada Cañari, Richard |
| collection | Repositorio INIA |
| description | This study provides a comprehensive mitochondrial genome sequence and a phylogenetic analysis of Jakumaru (Bos taurus), a prominent bull from a Peruvian breeding program. The mitochondrial genome, spanning 16,340bp, comprises 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes, with a GC content of 40%. The gene arrangement and structural organization are highly conserved, closely resembling those of related Bovine species, indicating a stable genomic architecture essential for mitochondrial function. Phylogenetic analysis, incorporating 35 complete bovine mitochondrial genomes, positions Jakumaru within Subclade I, revealing a close relationship with European Simmental cattle. The study emphasizes the biological diversity and the evolution of the Simmental breed, influenced by natural selection, breeding practices, and genetic drift. These findings enhance our understanding of the breed's genetic variation and its evolution, particularly in the context of its importance in Peru |
| format | Artículo |
| id | INIA2647 |
| institution | Institucional Nacional de Innovación Agraria |
| language | Inglés |
| publishDate | 2025 |
| publishDateRange | 2025 |
| publishDateSort | 2025 |
| publisher | Unique Scientific Publishers |
| publisherStr | Unique Scientific Publishers |
| record_format | dspace |
| spelling | INIA26472025-02-28T13:31:56Z Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd Estrada Cañari, Richard Romero Avila, Yolanda Madelein Figueroa Venegas, Deyanira Antonella Quilcate Pairazamán, Carlos Enrique León Trinidad, Silvia Eliana Casanova Nuñez Melgar, David pavel Maicelo, Jorge L. Arbizu, Carlos I. Bos taurus Simmental breed Mitochondrial genome Phylogenetic analysis SNP-data Peruvian Genetic Nucleus https://purl.org/pe-repo/ocde/ford#4.03.01 Agricultura This study provides a comprehensive mitochondrial genome sequence and a phylogenetic analysis of Jakumaru (Bos taurus), a prominent bull from a Peruvian breeding program. The mitochondrial genome, spanning 16,340bp, comprises 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes, with a GC content of 40%. The gene arrangement and structural organization are highly conserved, closely resembling those of related Bovine species, indicating a stable genomic architecture essential for mitochondrial function. Phylogenetic analysis, incorporating 35 complete bovine mitochondrial genomes, positions Jakumaru within Subclade I, revealing a close relationship with European Simmental cattle. The study emphasizes the biological diversity and the evolution of the Simmental breed, influenced by natural selection, breeding practices, and genetic drift. These findings enhance our understanding of the breed's genetic variation and its evolution, particularly in the context of its importance in Peru 2025-02-28T13:31:56Z 2025-02-28T13:31:56Z 2025-01-22 info:eu-repo/semantics/article Estrada, R.; Romero, Y.; Figueroa, D.; Quilcate, C.; Leon, S.; Casanova, D.; Maicelo, J. L.; & Arbizu, C. I. (2025). Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd. International Journal of Veterinary Science x(x): xxxx. doi: 10.47278/journal.ijvs/2024.007 2304-3075 http://hdl.handle.net/20.500.12955/2647 https://doi.org/10.47278/journal.ijvs/2024.007 eng urn:isnn:2304-3075 International Journal of Veterinary Science info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-nd/4.0/ application/pdf application/pdf Unique Scientific Publishers PK Instituto Nacional de Innovación Agraria Repositorio Institucional - INIA |
| spellingShingle | Bos taurus Simmental breed Mitochondrial genome Phylogenetic analysis SNP-data Peruvian Genetic Nucleus https://purl.org/pe-repo/ocde/ford#4.03.01 Agricultura Estrada Cañari, Richard Romero Avila, Yolanda Madelein Figueroa Venegas, Deyanira Antonella Quilcate Pairazamán, Carlos Enrique León Trinidad, Silvia Eliana Casanova Nuñez Melgar, David pavel Maicelo, Jorge L. Arbizu, Carlos I. Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd |
| title | Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd |
| title_full | Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd |
| title_fullStr | Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd |
| title_full_unstemmed | Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd |
| title_short | Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd |
| title_sort | complete mitogenome phylogenetic and snp data analysis of jakumaru bos taurus a prime bull from a peruvian breeding core herd |
| topic | Bos taurus Simmental breed Mitochondrial genome Phylogenetic analysis SNP-data Peruvian Genetic Nucleus https://purl.org/pe-repo/ocde/ford#4.03.01 Agricultura |
| url | http://hdl.handle.net/20.500.12955/2647 https://doi.org/10.47278/journal.ijvs/2024.007 |
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