Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloro...
| Main Authors: | , , , , |
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| Format: | Artículo |
| Language: | Inglés |
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Taylor & Francis
2022
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| Online Access: | https://hdl.handle.net/20.500.12955/1662 https://doi.org/10.1080/23802359.2021.1997122 |
| _version_ | 1855490191951659008 |
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| author | Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
| author_browse | Cardenas Ninasivincha, Stefanny Chávez Galarza, Julio César Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
| author_facet | Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
| author_sort | Chávez Galarza, Julio César |
| collection | Repositorio INIA |
| description | Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloroplast genome is 159,131 bp in length, containing a large single-copy region of 87,164 bp, a small single-copy region of 18,521 bp, and a pair of inverted repeat regions of 26,723 bp. The GC content of the chloroplast genome is 37.33%. It encodes a total of 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The phylogenetic tree indicates that T. landbeckii is placed within the Bromeliaceae family and has a close relationship with T. marconae with 100% support. |
| format | Artículo |
| id | INIA1662 |
| institution | Institucional Nacional de Innovación Agraria |
| language | Inglés |
| publishDate | 2022 |
| publishDateRange | 2022 |
| publishDateSort | 2022 |
| publisher | Taylor & Francis |
| publisherStr | Taylor & Francis |
| record_format | dspace |
| spelling | INIA16622022-11-21T20:06:01Z Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson Chloroplast genome Tillandsia landbeckii https://purl.org/pe-repo/ocde/ford#4.04.00 Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloroplast genome is 159,131 bp in length, containing a large single-copy region of 87,164 bp, a small single-copy region of 18,521 bp, and a pair of inverted repeat regions of 26,723 bp. The GC content of the chloroplast genome is 37.33%. It encodes a total of 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The phylogenetic tree indicates that T. landbeckii is placed within the Bromeliaceae family and has a close relationship with T. marconae with 100% support. 2022-04-13T21:18:23Z 2022-04-13T21:18:23Z 2021-11-10 info:eu-repo/semantics/article Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert. Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377. doi: 10.1080/23802359.2021.1997122 https://hdl.handle.net/20.500.12955/1662 Mitochondrial DNA Part B https://doi.org/10.1080/23802359.2021.1997122 eng Mitochondrial DNA Part B 2021, VOL. 6, NO. 12, 3375–3377 https://doi.org/10.1080/23802359.2021.1997122 info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-nd/4.0/ application/pdf application/pdf Perú Taylor & Francis Reino Unido Instituto Nacional de Innovación Agraria Repositorio Institucional - INIA |
| spellingShingle | Chloroplast genome Tillandsia landbeckii https://purl.org/pe-repo/ocde/ford#4.04.00 Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
| title | Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
| title_full | Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
| title_fullStr | Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
| title_full_unstemmed | Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
| title_short | Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert |
| title_sort | chloroplast genome of tillandsia landbeckii phil bromeliaceae a species adapted to the hyper arid conditions of the atacama and peruvian desert |
| topic | Chloroplast genome Tillandsia landbeckii https://purl.org/pe-repo/ocde/ford#4.04.00 |
| url | https://hdl.handle.net/20.500.12955/1662 https://doi.org/10.1080/23802359.2021.1997122 |
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