Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species
Tillandsia marconae Till & Vitek (Bromeliaceae) is a rare plant native species that grows over sand, in the coastal desert from Perú and Chile and is considered an endangered species. In this study, we assembled its chloroplast genome. The draft chloroplast genome of T. marconae is ca. 158,873 bp in...
| Autores principales: | , , , , |
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| Formato: | info:eu-repo/semantics/article |
| Lenguaje: | Inglés |
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Taylor & Francis
2022
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| Materias: | |
| Acceso en línea: | https://hdl.handle.net/20.500.12955/1661 https://doi.org/10.1080/23802359.2021.1944364 |
| _version_ | 1855028459906007040 |
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| author | Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
| author_browse | Cardenas Ninasivincha, Stefanny Chávez Galarza, Julio César Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
| author_facet | Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson |
| author_sort | Chávez Galarza, Julio César |
| collection | Repositorio INIA |
| description | Tillandsia marconae Till & Vitek (Bromeliaceae) is a rare plant native species that grows over sand, in the coastal desert from Perú and Chile and is considered an endangered species. In this study, we assembled its chloroplast genome. The draft chloroplast genome of T. marconae is ca. 158,873 bp in length, containing a large single-copy region of 86,937 bp, a small single-copy region of 18,506 bp, and a pair of inverted repeat regions of 26,715 bp. The GC content of the draft chloroplast genome is 37.4%. It encodes a total of 135 genes, including 86 protein-coding genes, 38 tRNA genes, 8 rRNA genes, and three pseudogenes. The phylogenetic tree indicated that T. marconae is placed within the Bromeliaceae family and a close relationship with Tillandsia usneoides with 100% support. |
| format | info:eu-repo/semantics/article |
| id | INIA1661 |
| institution | Institucional Nacional de Innovación Agraria |
| language | Inglés |
| publishDate | 2022 |
| publishDateRange | 2022 |
| publishDateSort | 2022 |
| publisher | Taylor & Francis |
| publisherStr | Taylor & Francis |
| record_format | dspace |
| spelling | INIA16612022-11-21T20:06:16Z Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson Chloroplast genome Tillandsia https://purl.org/pe-repo/ocde/ford#4.04.00 Tillandsia marconae Till & Vitek (Bromeliaceae) is a rare plant native species that grows over sand, in the coastal desert from Perú and Chile and is considered an endangered species. In this study, we assembled its chloroplast genome. The draft chloroplast genome of T. marconae is ca. 158,873 bp in length, containing a large single-copy region of 86,937 bp, a small single-copy region of 18,506 bp, and a pair of inverted repeat regions of 26,715 bp. The GC content of the draft chloroplast genome is 37.4%. It encodes a total of 135 genes, including 86 protein-coding genes, 38 tRNA genes, 8 rRNA genes, and three pseudogenes. The phylogenetic tree indicated that T. marconae is placed within the Bromeliaceae family and a close relationship with Tillandsia usneoides with 100% support. 2022-04-13T21:16:54Z 2022-04-13T21:16:54Z 2021-08-20 info:eu-repo/semantics/article Chávez, J.; Cardenas, S.; Contreras, R.; Ferro, R. & Huanca, W. (2021). Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species. Mitochondrial DNA Part B 2021, VOL. 6, NO. 9, 2562–2564. doi: 10.1080/23802359.2021.1944364 https://hdl.handle.net/20.500.12955/1661 Mitochondrial DNA Part B https://doi.org/10.1080/23802359.2021.1944364 eng Mitochondrial DNA Part B 2021, VOL. 6, NO. 9, 2562–2564 https://doi.org/10.1080/23802359.2021.1944364 info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-nd/4.0/ application/pdf application/pdf Perú Taylor & Francis Reino Unido Instituto Nacional de Innovación Agraria Repositorio Institucional - INIA |
| spellingShingle | Chloroplast genome Tillandsia https://purl.org/pe-repo/ocde/ford#4.04.00 Chávez Galarza, Julio César Cardenas Ninasivincha, Stefanny Contreras, Roberto Ferro Mauricio, Rubén Darío Huanca Mamani, Wilson Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species |
| title | Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species |
| title_full | Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species |
| title_fullStr | Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species |
| title_full_unstemmed | Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species |
| title_short | Chloroplast genome of Tillandsia marconae till & Vitek (Bromeliaceae), a hyperarid desert endangered species |
| title_sort | chloroplast genome of tillandsia marconae till vitek bromeliaceae a hyperarid desert endangered species |
| topic | Chloroplast genome Tillandsia https://purl.org/pe-repo/ocde/ford#4.04.00 |
| url | https://hdl.handle.net/20.500.12955/1661 https://doi.org/10.1080/23802359.2021.1944364 |
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