From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa
The tRNAleu-COX2 intergenic region of the mitochondrial DNA has been used for assessing diversity in honey bee (Apis mellifera L.) populations worldwide. However, differential mutation rates in different partitions of the mitogenome may produce incongruent results. In this study, we sequenced 123 mi...
| Autores principales: | , , , , , , , , |
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| Formato: | info:eu-repo/semantics/article |
| Lenguaje: | Inglés |
| Publicado: |
Springer Nature
2021
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| Materias: | |
| Acceso en línea: | https://repositorio.inia.gob.pe/handle/20.500.12955/1228 https://doi.org/10.1007/s13592-019-00632-9 |
| _version_ | 1855028634309361664 |
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| author | Henriques, Dora Chávez Galarza, Julio César Quaresma, Andreia Neves, Cátia José Lopes, Ana Rita Costa, Cecília Costa, Filipe O. Rufino, José Pinto, María Alice |
| author_browse | Chávez Galarza, Julio César Costa, Cecília Costa, Filipe O. Henriques, Dora Lopes, Ana Rita Neves, Cátia José Pinto, María Alice Quaresma, Andreia Rufino, José |
| author_facet | Henriques, Dora Chávez Galarza, Julio César Quaresma, Andreia Neves, Cátia José Lopes, Ana Rita Costa, Cecília Costa, Filipe O. Rufino, José Pinto, María Alice |
| author_sort | Henriques, Dora |
| collection | Repositorio INIA |
| description | The tRNAleu-COX2 intergenic region of the mitochondrial DNA has been used for assessing diversity in honey bee (Apis mellifera L.) populations worldwide. However, differential mutation rates in different partitions of the mitogenome may produce incongruent results. In this study, we sequenced 123 mitogenomes of 7 subspecies from lineages A, M, and C. This allowed generating a comprehensive dataset to investigate the phylogenetic and phylogeographic congruence among the mitogenome, individual genes, and the tRNAleu-COX2 region. We showed that the diversity patterns inferred from the tRNAleu-COX2 marker are not fully paralleled by those obtained with the mitogenome and the individual genes; while the three lineages are supported by these, the African sub-lineages and the haplotypes are not. Thus, conclusions drawn from the tRNAleu-COX2 region need to be taken with caution and this marker may not be appropriate to infer phylogenetic relationships between honey bee colonies. |
| format | info:eu-repo/semantics/article |
| id | INIA1228 |
| institution | Institucional Nacional de Innovación Agraria |
| language | Inglés |
| publishDate | 2021 |
| publishDateRange | 2021 |
| publishDateSort | 2021 |
| publisher | Springer Nature |
| publisherStr | Springer Nature |
| record_format | dspace |
| spelling | INIA12282022-11-21T20:25:37Z From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa Henriques, Dora Chávez Galarza, Julio César Quaresma, Andreia Neves, Cátia José Lopes, Ana Rita Costa, Cecília Costa, Filipe O. Rufino, José Pinto, María Alice Iberian honey bee tRNA(leu)-COX2 Intergenic region Mitogenome Tecnología de modificación genética The tRNAleu-COX2 intergenic region of the mitochondrial DNA has been used for assessing diversity in honey bee (Apis mellifera L.) populations worldwide. However, differential mutation rates in different partitions of the mitogenome may produce incongruent results. In this study, we sequenced 123 mitogenomes of 7 subspecies from lineages A, M, and C. This allowed generating a comprehensive dataset to investigate the phylogenetic and phylogeographic congruence among the mitogenome, individual genes, and the tRNAleu-COX2 region. We showed that the diversity patterns inferred from the tRNAleu-COX2 marker are not fully paralleled by those obtained with the mitogenome and the individual genes; while the three lineages are supported by these, the African sub-lineages and the haplotypes are not. Thus, conclusions drawn from the tRNAleu-COX2 region need to be taken with caution and this marker may not be appropriate to infer phylogenetic relationships between honey bee colonies. 1. INTRODUCTION. 2. METHODS. 3. RESULTS. 4. DISCUSSION. REFERENCES 2021-01-19T13:45:23Z 2021-01-19T13:45:23Z 2019-03-01 info:eu-repo/semantics/article Henriques, D., Chávez-Galarza, J., Quaresma, A. et al. From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa Apidologie 50, 215–229 (2019). doi: 10.1007/s13592-019-00632-9 https://repositorio.inia.gob.pe/handle/20.500.12955/1228 Apidologie https://doi.org/10.1007/s13592-019-00632-9 eng Apidologie (2019) 50:215–229 https://doi.org/10.1007/s13592-019-00632-9 info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ application/pdf application/pdf Europa y North Africa Springer Nature Reino Unido Instituto Nacional de Innovación Agraria Repositorio Institucional - INIA |
| spellingShingle | Iberian honey bee tRNA(leu)-COX2 Intergenic region Mitogenome Tecnología de modificación genética Henriques, Dora Chávez Galarza, Julio César Quaresma, Andreia Neves, Cátia José Lopes, Ana Rita Costa, Cecília Costa, Filipe O. Rufino, José Pinto, María Alice From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa |
| title | From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa |
| title_full | From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa |
| title_fullStr | From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa |
| title_full_unstemmed | From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa |
| title_short | From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa |
| title_sort | from the popular trnaleu cox2 intergenic region to the mitogenome insights from diverse honey bee populations of europe and north africa |
| topic | Iberian honey bee tRNA(leu)-COX2 Intergenic region Mitogenome Tecnología de modificación genética |
| url | https://repositorio.inia.gob.pe/handle/20.500.12955/1228 https://doi.org/10.1007/s13592-019-00632-9 |
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