Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation
Psidium cattleyanum Sabine is an Atlantic Forest native species that presents some populations with red fruits and others with yellow fruits. This variation in fruit pigmentation in this species is an intriguing character that could be related to species evolution but still needs to be further explo...
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| Format: | Artículo |
| Language: | Inglés |
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Sociedade Brasileira de Genética
2020
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| Online Access: | https://repositorio.inia.gob.pe/handle/20.500.12955/1103 https://doi.org/10.1590/1678-4685-GMB-2019-0255 |
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| author | Vetö, Nicole M. Guzmán Escuredo, Frank Lino Kulcheski, Franceli R. Segatto, Ana Lúcia A. Lacerda, María Eduarda G. Margis, Rogerio Turchetto Zolet, Andreia Carina |
| author_browse | Guzmán Escuredo, Frank Lino Kulcheski, Franceli R. Lacerda, María Eduarda G. Margis, Rogerio Segatto, Ana Lúcia A. Turchetto Zolet, Andreia Carina Vetö, Nicole M. |
| author_facet | Vetö, Nicole M. Guzmán Escuredo, Frank Lino Kulcheski, Franceli R. Segatto, Ana Lúcia A. Lacerda, María Eduarda G. Margis, Rogerio Turchetto Zolet, Andreia Carina |
| author_sort | Vetö, Nicole M. |
| collection | Repositorio INIA |
| description | Psidium cattleyanum Sabine is an Atlantic Forest native species that presents some populations with red fruits and others with yellow fruits. This variation in fruit pigmentation in this species is an intriguing character that could be related to species evolution but still needs to be further explored. Our goal was to provide genomic information for these morphotypes to understand the molecular mechanisms of differences in fruit colour in this species. In this study, we performed a comparative transcriptome analysis of red and yellow morphotypes of P. cattleyanum, considering two stages of fruit ripening. The transcriptomic analysis performed encompassing leaves, unripe and ripe fruits, in triplicate for each morphotype. The transcriptome consensus from each morphotype showed 301,058 and 298,310 contigs from plants with yellow and red fruits, respectively. The differential expression revealed important genes that were involved in anthocyanins biosynthesis, such as the anthocyanidin synthase (ANS) and UDP-glucose:flavonoid-o-glucosyltransferase (UFGT) that were differentially regulated during fruit ripening. This study reveals stimulating data for the understanding of the pathways and mechanisms involved in the maturation and colouring of P. cattleyanum fruits and suggests that the ANS and UFGT genes are key factors involved in the synthase and pigmentation accumulation in red fruits. |
| format | Artículo |
| id | INIA1103 |
| institution | Institucional Nacional de Innovación Agraria |
| language | Inglés |
| publishDate | 2020 |
| publishDateRange | 2020 |
| publishDateSort | 2020 |
| publisher | Sociedade Brasileira de Genética |
| publisherStr | Sociedade Brasileira de Genética |
| record_format | dspace |
| spelling | INIA11032024-03-06T13:54:55Z Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation Vetö, Nicole M. Guzmán Escuredo, Frank Lino Kulcheski, Franceli R. Segatto, Ana Lúcia A. Lacerda, María Eduarda G. Margis, Rogerio Turchetto Zolet, Andreia Carina Anthocyanin Atlantic Forest Carotenoids Fruit ripening Myrtaceae Biotecnología agrícola Psidium cattleyanum Sabine is an Atlantic Forest native species that presents some populations with red fruits and others with yellow fruits. This variation in fruit pigmentation in this species is an intriguing character that could be related to species evolution but still needs to be further explored. Our goal was to provide genomic information for these morphotypes to understand the molecular mechanisms of differences in fruit colour in this species. In this study, we performed a comparative transcriptome analysis of red and yellow morphotypes of P. cattleyanum, considering two stages of fruit ripening. The transcriptomic analysis performed encompassing leaves, unripe and ripe fruits, in triplicate for each morphotype. The transcriptome consensus from each morphotype showed 301,058 and 298,310 contigs from plants with yellow and red fruits, respectively. The differential expression revealed important genes that were involved in anthocyanins biosynthesis, such as the anthocyanidin synthase (ANS) and UDP-glucose:flavonoid-o-glucosyltransferase (UFGT) that were differentially regulated during fruit ripening. This study reveals stimulating data for the understanding of the pathways and mechanisms involved in the maturation and colouring of P. cattleyanum fruits and suggests that the ANS and UFGT genes are key factors involved in the synthase and pigmentation accumulation in red fruits. Introduction. Material and Methods. Results. Discussion. Acknowlegdments. References 2020-06-09T03:51:12Z 2020-06-09T03:51:12Z 2020-04-27 info:eu-repo/semantics/article Vetö, Nicole M., Guzman, Frank, Kulcheski, Franceli R., Segatto, Ana Lúcia A., Lacerda, Maria Eduarda G., Margis, Rogerio, & Turchetto-Zolet, Andreia C.. (2020). Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation. Genetics and Molecular Biology, 43(2), e20190255. Epub April 27, 2020. doi: 10.1590/1678-4685-gmb-2019-0255 https://repositorio.inia.gob.pe/handle/20.500.12955/1103 Genetic and Molecular Biology https://doi.org/10.1590/1678-4685-GMB-2019-0255 eng Genetics and Molecular Biology 43, 2, e20190255 (2020) https://doi.org/10.1590/1678-4685-GMB-2019-0255 info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ application/pdf application/pdf Brasil Sociedade Brasileira de Genética Brasil Instituto Nacional de Innovación Agraria Repositorio Institucional - INIA |
| spellingShingle | Anthocyanin Atlantic Forest Carotenoids Fruit ripening Myrtaceae Biotecnología agrícola Vetö, Nicole M. Guzmán Escuredo, Frank Lino Kulcheski, Franceli R. Segatto, Ana Lúcia A. Lacerda, María Eduarda G. Margis, Rogerio Turchetto Zolet, Andreia Carina Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation |
| title | Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation |
| title_full | Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation |
| title_fullStr | Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation |
| title_full_unstemmed | Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation |
| title_short | Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation |
| title_sort | transcriptomics analysis of psidium cattleyanum sabine myrtaceae unveil potential genes involved in fruit pigmentation |
| topic | Anthocyanin Atlantic Forest Carotenoids Fruit ripening Myrtaceae Biotecnología agrícola |
| url | https://repositorio.inia.gob.pe/handle/20.500.12955/1103 https://doi.org/10.1590/1678-4685-GMB-2019-0255 |
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