Gene pools and the genetic architecture of domesticated cowpea

Cowpea [Vigna unguiculata (L.) Walp.] is a major tropical legume crop grown in warm to hot areas throughout the world and especially important to the people of sub-Saharan Africa where the crop was domesticated. To date, relatively little is understood about its domestication origins and patterns of...

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Autores principales: Huynh, B., Close, T.J., Roberts, P. A., Hu, Z., Wanamaker, S., Lucas, M. R., Chiulele, R., Cisse, N., David, A., Hearne, S., Fatokun, C.A., Diop, N.N., Ehlers, J.D.
Formato: Journal Article
Lenguaje:Inglés
Publicado: Wiley 2013
Materias:
Acceso en línea:https://hdl.handle.net/10568/77429
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author Huynh, B.
Close, T.J.
Roberts, P. A.
Hu, Z.
Wanamaker, S.
Lucas, M. R.
Chiulele, R.
Cisse, N.
David, A.
Hearne, S.
Fatokun, C.A.
Diop, N.N.
Ehlers, J.D.
author_browse Chiulele, R.
Cisse, N.
Close, T.J.
David, A.
Diop, N.N.
Ehlers, J.D.
Fatokun, C.A.
Hearne, S.
Hu, Z.
Huynh, B.
Lucas, M. R.
Roberts, P. A.
Wanamaker, S.
author_facet Huynh, B.
Close, T.J.
Roberts, P. A.
Hu, Z.
Wanamaker, S.
Lucas, M. R.
Chiulele, R.
Cisse, N.
David, A.
Hearne, S.
Fatokun, C.A.
Diop, N.N.
Ehlers, J.D.
author_sort Huynh, B.
collection Repository of Agricultural Research Outputs (CGSpace)
description Cowpea [Vigna unguiculata (L.) Walp.] is a major tropical legume crop grown in warm to hot areas throughout the world and especially important to the people of sub-Saharan Africa where the crop was domesticated. To date, relatively little is understood about its domestication origins and patterns of genetic variation. In this study, a worldwide collection of cowpea landraces and African ancestral wild cowpea was genotyped with more than 1200 single nucleotide polymorphism markers. Bayesian inference revealed the presence of two major gene pools in cultivated cowpea in Africa. Landraces from gene pool 1 are mostly distributed in western Africa while the majority of gene pool 2 are located in eastern Africa. Each gene pool is most closely related to wild cowpea in the same geographic region, indicating divergent domestication processes leading to the formation of two gene pools. The total genetic variation within landraces from countries outside Africa was slightly greater than within African landraces. Accessions from Asia and Europe were more related to those from western Africa while accessions from the Americas appeared more closely related to those from eastern Africa. This delineation of cowpea germplasm into groups of genetic relatedness will be valuable for guiding introgression efforts in breeding programs and for improving the efficiency of germplasm management
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spelling CGSpace774292025-11-11T10:10:57Z Gene pools and the genetic architecture of domesticated cowpea Huynh, B. Close, T.J. Roberts, P. A. Hu, Z. Wanamaker, S. Lucas, M. R. Chiulele, R. Cisse, N. David, A. Hearne, S. Fatokun, C.A. Diop, N.N. Ehlers, J.D. cowpeas gene pools cereal genetic variation germplasm management Cowpea [Vigna unguiculata (L.) Walp.] is a major tropical legume crop grown in warm to hot areas throughout the world and especially important to the people of sub-Saharan Africa where the crop was domesticated. To date, relatively little is understood about its domestication origins and patterns of genetic variation. In this study, a worldwide collection of cowpea landraces and African ancestral wild cowpea was genotyped with more than 1200 single nucleotide polymorphism markers. Bayesian inference revealed the presence of two major gene pools in cultivated cowpea in Africa. Landraces from gene pool 1 are mostly distributed in western Africa while the majority of gene pool 2 are located in eastern Africa. Each gene pool is most closely related to wild cowpea in the same geographic region, indicating divergent domestication processes leading to the formation of two gene pools. The total genetic variation within landraces from countries outside Africa was slightly greater than within African landraces. Accessions from Asia and Europe were more related to those from western Africa while accessions from the Americas appeared more closely related to those from eastern Africa. This delineation of cowpea germplasm into groups of genetic relatedness will be valuable for guiding introgression efforts in breeding programs and for improving the efficiency of germplasm management 2013-11 2016-10-27T08:30:36Z 2016-10-27T08:30:36Z Journal Article https://hdl.handle.net/10568/77429 en Open Access application/pdf Wiley Huynh, B., Close, T.J., Roberts, P.A., Hu, Z., Wanamaker, S., Lucas, M.R., ... & Fatokun, C. (2013). Gene pools and the genetic architecture of domesticated cowpea. The Plant Genome, 6(3).
spellingShingle cowpeas
gene pools
cereal
genetic variation
germplasm
management
Huynh, B.
Close, T.J.
Roberts, P. A.
Hu, Z.
Wanamaker, S.
Lucas, M. R.
Chiulele, R.
Cisse, N.
David, A.
Hearne, S.
Fatokun, C.A.
Diop, N.N.
Ehlers, J.D.
Gene pools and the genetic architecture of domesticated cowpea
title Gene pools and the genetic architecture of domesticated cowpea
title_full Gene pools and the genetic architecture of domesticated cowpea
title_fullStr Gene pools and the genetic architecture of domesticated cowpea
title_full_unstemmed Gene pools and the genetic architecture of domesticated cowpea
title_short Gene pools and the genetic architecture of domesticated cowpea
title_sort gene pools and the genetic architecture of domesticated cowpea
topic cowpeas
gene pools
cereal
genetic variation
germplasm
management
url https://hdl.handle.net/10568/77429
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