Progress in developing a sweetpotato ontology for breeders
Crop ontologies have been identified under the Generation Challenge Program and at the International Potato Center (CIP) as a crucial tool for managing and analyzing crop related information. Here we report progress on applying ontological concepts on sweetpotato traits important for breeders and va...
| Main Authors: | , , , , , , |
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| Format: | Poster |
| Language: | Inglés |
| Published: |
2014
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| Subjects: | |
| Online Access: | https://hdl.handle.net/10568/68636 |
| _version_ | 1855523420687564800 |
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| author | Simon, R. Hualla, V. Eyzaguirre, R. Córdova, R. Mwanga, Robert O.M. Rossel, G. Grüneberg, W.J. |
| author_browse | Córdova, R. Eyzaguirre, R. Grüneberg, W.J. Hualla, V. Mwanga, Robert O.M. Rossel, G. Simon, R. |
| author_facet | Simon, R. Hualla, V. Eyzaguirre, R. Córdova, R. Mwanga, Robert O.M. Rossel, G. Grüneberg, W.J. |
| author_sort | Simon, R. |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | Crop ontologies have been identified under the Generation Challenge Program and at the International Potato Center (CIP) as a crucial tool for managing and analyzing crop related information. Here we report progress on applying ontological concepts on sweetpotato traits important for breeders and varietal development. We defined a general strategy of identifying important traits based on their re-use in catalogs and experience in usage. A list of about 40 descriptors was identified, including 17 morphological and 22 evaluation traits. Those traits were crosschecked against other crop-ontologies (cassava, barley, maize, solanaceae) on the community site ‘crop ontology’ for consistency. Where appropriate, we annotated linkages. The current draft list of traits is still work-in-progress and subject to further review and refinement. This will include completion of traits, further consistency checks and translation before depositing on the crop-ontology site. The 39 descriptors include morphological (17), agronomical (3), resistance (4), biochemical (11) and post-harvest (4) traits. |
| format | Poster |
| id | CGSpace68636 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2014 |
| publishDateRange | 2014 |
| publishDateSort | 2014 |
| record_format | dspace |
| spelling | CGSpace686362025-11-06T13:36:03Z Progress in developing a sweetpotato ontology for breeders Simon, R. Hualla, V. Eyzaguirre, R. Córdova, R. Mwanga, Robert O.M. Rossel, G. Grüneberg, W.J. sweet potatoes ontology breeding Crop ontologies have been identified under the Generation Challenge Program and at the International Potato Center (CIP) as a crucial tool for managing and analyzing crop related information. Here we report progress on applying ontological concepts on sweetpotato traits important for breeders and varietal development. We defined a general strategy of identifying important traits based on their re-use in catalogs and experience in usage. A list of about 40 descriptors was identified, including 17 morphological and 22 evaluation traits. Those traits were crosschecked against other crop-ontologies (cassava, barley, maize, solanaceae) on the community site ‘crop ontology’ for consistency. Where appropriate, we annotated linkages. The current draft list of traits is still work-in-progress and subject to further review and refinement. This will include completion of traits, further consistency checks and translation before depositing on the crop-ontology site. The 39 descriptors include morphological (17), agronomical (3), resistance (4), biochemical (11) and post-harvest (4) traits. 2014-03-31 2015-10-22T14:10:25Z 2015-10-22T14:10:25Z Poster https://hdl.handle.net/10568/68636 en Open Access application/pdf Simon, R.; Hualla, V.; Eyzaguirre, R.; Cordova, R.; Mwanga, R.O.M.; Rossel, G.; Gruneberg, W. 2014. Progress in developing a sweetpotato ontology for breeders. Workshop on Crop Ontology and Phenotyping Data Interoperability. Montpellier (France). 31 Mar - 4 Apr 2014. Poster (France). 1 p. |
| spellingShingle | sweet potatoes ontology breeding Simon, R. Hualla, V. Eyzaguirre, R. Córdova, R. Mwanga, Robert O.M. Rossel, G. Grüneberg, W.J. Progress in developing a sweetpotato ontology for breeders |
| title | Progress in developing a sweetpotato ontology for breeders |
| title_full | Progress in developing a sweetpotato ontology for breeders |
| title_fullStr | Progress in developing a sweetpotato ontology for breeders |
| title_full_unstemmed | Progress in developing a sweetpotato ontology for breeders |
| title_short | Progress in developing a sweetpotato ontology for breeders |
| title_sort | progress in developing a sweetpotato ontology for breeders |
| topic | sweet potatoes ontology breeding |
| url | https://hdl.handle.net/10568/68636 |
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