An Agrobacterium‐mediated base editing approach generates transgene‐free edited banana

Genome editing for the development of improved varieties is supported by the possibility of segregating out the editor T-DNA cassette after genome editing in many crop species. Removal of the T-DNA cassette prevents potential continuous editing activity in the transformed plant and furthermore facil...

Descripción completa

Detalles Bibliográficos
Autores principales: Van den Broeck, Senne, Ngapout, Yvan, Panis, Bart, Vanderschuren, Hervé
Formato: Journal Article
Lenguaje:Inglés
Publicado: Wiley 2025
Materias:
Acceso en línea:https://hdl.handle.net/10568/174186
_version_ 1855513476420599808
author Van den Broeck, Senne
Ngapout, Yvan
Panis, Bart
Vanderschuren, Hervé
author_browse Ngapout, Yvan
Panis, Bart
Van den Broeck, Senne
Vanderschuren, Hervé
author_facet Van den Broeck, Senne
Ngapout, Yvan
Panis, Bart
Vanderschuren, Hervé
author_sort Van den Broeck, Senne
collection Repository of Agricultural Research Outputs (CGSpace)
description Genome editing for the development of improved varieties is supported by the possibility of segregating out the editor T-DNA cassette after genome editing in many crop species. Removal of the T-DNA cassette prevents potential continuous editing activity in the transformed plant and furthermore facilitates regulatory approval. While transgene outcrossing of exogenous sequences is possible for many crops, this is not the case for vegetatively propagated and sterile crops, such as Cavendish bananas. Therefore, gene editing techniques leading to transgene-free edited plants are essential to untap the potential of genome editing for those crops. Here, we present a method for transgene-free gene editing in sterile banana (Musa spp.) through a co-editing strategy. A novel Agrobacterium tumefaciens-mediated transgene-free gene editing approach combining embryogenesis and chlorsulfuron selection was established in sterile banana and validated through whole genome sequencing. Editing of the acetolactate synthase (MaALS) genes in banana using a plant base editor allows effective selection of edited plants. Moreover, transgene-free plantlets were regenerated with mutations at two target sites, indicating that the strategy can be used to target multiple genomic sites. The presented method allows for efficient transgene-free gene editing and represents the first report of a co-editing strategy in sterile crop species.
format Journal Article
id CGSpace174186
institution CGIAR Consortium
language Inglés
publishDate 2025
publishDateRange 2025
publishDateSort 2025
publisher Wiley
publisherStr Wiley
record_format dspace
spelling CGSpace1741862025-11-11T17:39:05Z An Agrobacterium‐mediated base editing approach generates transgene‐free edited banana Van den Broeck, Senne Ngapout, Yvan Panis, Bart Vanderschuren, Hervé gene editing crispr agrobacterium musa (banana) gene transfer-transgenesis Genome editing for the development of improved varieties is supported by the possibility of segregating out the editor T-DNA cassette after genome editing in many crop species. Removal of the T-DNA cassette prevents potential continuous editing activity in the transformed plant and furthermore facilitates regulatory approval. While transgene outcrossing of exogenous sequences is possible for many crops, this is not the case for vegetatively propagated and sterile crops, such as Cavendish bananas. Therefore, gene editing techniques leading to transgene-free edited plants are essential to untap the potential of genome editing for those crops. Here, we present a method for transgene-free gene editing in sterile banana (Musa spp.) through a co-editing strategy. A novel Agrobacterium tumefaciens-mediated transgene-free gene editing approach combining embryogenesis and chlorsulfuron selection was established in sterile banana and validated through whole genome sequencing. Editing of the acetolactate synthase (MaALS) genes in banana using a plant base editor allows effective selection of edited plants. Moreover, transgene-free plantlets were regenerated with mutations at two target sites, indicating that the strategy can be used to target multiple genomic sites. The presented method allows for efficient transgene-free gene editing and represents the first report of a co-editing strategy in sterile crop species. 2025-08 2025-04-15T08:43:02Z 2025-04-15T08:43:02Z Journal Article https://hdl.handle.net/10568/174186 en Open Access application/pdf Wiley Van den Broeck, S.; Ngapout, Y.; Panis, B.; Vanderschuren, H. (2025) An <i>Agrobacterium</i>‐mediated base editing approach generates transgene‐free edited banana. New Phytologist , Online first paper(2025-04-01). ISSN: 0028-646X
spellingShingle gene editing
crispr
agrobacterium
musa (banana)
gene transfer-transgenesis
Van den Broeck, Senne
Ngapout, Yvan
Panis, Bart
Vanderschuren, Hervé
An Agrobacterium‐mediated base editing approach generates transgene‐free edited banana
title An Agrobacterium‐mediated base editing approach generates transgene‐free edited banana
title_full An Agrobacterium‐mediated base editing approach generates transgene‐free edited banana
title_fullStr An Agrobacterium‐mediated base editing approach generates transgene‐free edited banana
title_full_unstemmed An Agrobacterium‐mediated base editing approach generates transgene‐free edited banana
title_short An Agrobacterium‐mediated base editing approach generates transgene‐free edited banana
title_sort agrobacterium mediated base editing approach generates transgene free edited banana
topic gene editing
crispr
agrobacterium
musa (banana)
gene transfer-transgenesis
url https://hdl.handle.net/10568/174186
work_keys_str_mv AT vandenbroecksenne anagrobacteriummediatedbaseeditingapproachgeneratestransgenefreeeditedbanana
AT ngapoutyvan anagrobacteriummediatedbaseeditingapproachgeneratestransgenefreeeditedbanana
AT panisbart anagrobacteriummediatedbaseeditingapproachgeneratestransgenefreeeditedbanana
AT vanderschurenherve anagrobacteriummediatedbaseeditingapproachgeneratestransgenefreeeditedbanana
AT vandenbroecksenne agrobacteriummediatedbaseeditingapproachgeneratestransgenefreeeditedbanana
AT ngapoutyvan agrobacteriummediatedbaseeditingapproachgeneratestransgenefreeeditedbanana
AT panisbart agrobacteriummediatedbaseeditingapproachgeneratestransgenefreeeditedbanana
AT vanderschurenherve agrobacteriummediatedbaseeditingapproachgeneratestransgenefreeeditedbanana