A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency
Mineral deficiency limits crop production in most soils and in Asia alone, about 50% of rice lands are phosphorous deficient. In an attempt to determine the mechanism of rice adaptation to phosphorous deficiency, changes in proteome patterns associated with phosphorous deficiency have been investiga...
| Autores principales: | , , , , , , , , , |
|---|---|
| Formato: | Journal Article |
| Lenguaje: | Inglés |
| Publicado: |
Wiley
2009
|
| Materias: | |
| Acceso en línea: | https://hdl.handle.net/10568/166239 |
| _version_ | 1855542912988741632 |
|---|---|
| author | Torabi, Sepideh Wissuwa, Matthias Heidari, Manzar Naghavi, Mohammad-Reza Gilany, Kambiz Hajirezaei, Mohammad-Reza Omidi, Mansoor Yazdi-Samadi, Bahman Ismail, Abdelbagi M. Salekdeh, Ghasem Hosseini |
| author_browse | Gilany, Kambiz Hajirezaei, Mohammad-Reza Heidari, Manzar Ismail, Abdelbagi M. Naghavi, Mohammad-Reza Omidi, Mansoor Salekdeh, Ghasem Hosseini Torabi, Sepideh Wissuwa, Matthias Yazdi-Samadi, Bahman |
| author_facet | Torabi, Sepideh Wissuwa, Matthias Heidari, Manzar Naghavi, Mohammad-Reza Gilany, Kambiz Hajirezaei, Mohammad-Reza Omidi, Mansoor Yazdi-Samadi, Bahman Ismail, Abdelbagi M. Salekdeh, Ghasem Hosseini |
| author_sort | Torabi, Sepideh |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | Mineral deficiency limits crop production in most soils and in Asia alone, about 50% of rice lands are phosphorous deficient. In an attempt to determine the mechanism of rice adaptation to phosphorous deficiency, changes in proteome patterns associated with phosphorous deficiency have been investigated. We analyzed the parental line Nipponbare in comparison to its near isogenic line (NIL6‐4) carrying a major phosphorous uptake QTL (Pup1) on chromosome 12. Using 2‐DE, the proteome pattern of roots grown under 1 and 100 μM phosphorous were compared. Out of 669 proteins reproducibly detected on root 2‐DE gels, 32 proteins showed significant changes in the two genotypes. Of them, 17 proteins showed different responses in two genotypes under stress condition. MS resulted in identification of 26 proteins involved in major phosphorous deficiency adaptation pathways including reactive oxygen scavenging, citric acid cycle, signal transduction, and plant defense responses as well as proteins with unknown function. Our results highlighted a coordinated response in NIL in response to phosphorous deficiency which may confer higher adaptation to nutrient deficiency. |
| format | Journal Article |
| id | CGSpace166239 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2009 |
| publishDateRange | 2009 |
| publishDateSort | 2009 |
| publisher | Wiley |
| publisherStr | Wiley |
| record_format | dspace |
| spelling | CGSpace1662392025-05-14T10:24:33Z A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency Torabi, Sepideh Wissuwa, Matthias Heidari, Manzar Naghavi, Mohammad-Reza Gilany, Kambiz Hajirezaei, Mohammad-Reza Omidi, Mansoor Yazdi-Samadi, Bahman Ismail, Abdelbagi M. Salekdeh, Ghasem Hosseini adaptation biochemical pathways nutrient deficiencies phosphorus plant proteins proteomes proteomics roots stress stress response Mineral deficiency limits crop production in most soils and in Asia alone, about 50% of rice lands are phosphorous deficient. In an attempt to determine the mechanism of rice adaptation to phosphorous deficiency, changes in proteome patterns associated with phosphorous deficiency have been investigated. We analyzed the parental line Nipponbare in comparison to its near isogenic line (NIL6‐4) carrying a major phosphorous uptake QTL (Pup1) on chromosome 12. Using 2‐DE, the proteome pattern of roots grown under 1 and 100 μM phosphorous were compared. Out of 669 proteins reproducibly detected on root 2‐DE gels, 32 proteins showed significant changes in the two genotypes. Of them, 17 proteins showed different responses in two genotypes under stress condition. MS resulted in identification of 26 proteins involved in major phosphorous deficiency adaptation pathways including reactive oxygen scavenging, citric acid cycle, signal transduction, and plant defense responses as well as proteins with unknown function. Our results highlighted a coordinated response in NIL in response to phosphorous deficiency which may confer higher adaptation to nutrient deficiency. 2009-01 2024-12-19T12:56:01Z 2024-12-19T12:56:01Z Journal Article https://hdl.handle.net/10568/166239 en Wiley Torabi, Sepideh; Wissuwa, Matthias; Heidari, Manzar; Naghavi, Mohammad‐Reza; Gilany, Kambiz; Hajirezaei, Mohammad‐Reza; Omidi, Mansoor; Yazdi‐Samadi, Bahman; Ismail, Abdelbagi M. and Salekdeh, Ghasem Hosseini. 2008. A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency. Proteomics, Volume 9 no. 1 p. 159-170 |
| spellingShingle | adaptation biochemical pathways nutrient deficiencies phosphorus plant proteins proteomes proteomics roots stress stress response Torabi, Sepideh Wissuwa, Matthias Heidari, Manzar Naghavi, Mohammad-Reza Gilany, Kambiz Hajirezaei, Mohammad-Reza Omidi, Mansoor Yazdi-Samadi, Bahman Ismail, Abdelbagi M. Salekdeh, Ghasem Hosseini A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency |
| title | A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency |
| title_full | A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency |
| title_fullStr | A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency |
| title_full_unstemmed | A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency |
| title_short | A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency |
| title_sort | comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency |
| topic | adaptation biochemical pathways nutrient deficiencies phosphorus plant proteins proteomes proteomics roots stress stress response |
| url | https://hdl.handle.net/10568/166239 |
| work_keys_str_mv | AT torabisepideh acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT wissuwamatthias acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT heidarimanzar acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT naghavimohammadreza acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT gilanykambiz acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT hajirezaeimohammadreza acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT omidimansoor acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT yazdisamadibahman acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT ismailabdelbagim acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT salekdehghasemhosseini acomparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT torabisepideh comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT wissuwamatthias comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT heidarimanzar comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT naghavimohammadreza comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT gilanykambiz comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT hajirezaeimohammadreza comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT omidimansoor comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT yazdisamadibahman comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT ismailabdelbagim comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency AT salekdehghasemhosseini comparativeproteomeapproachtodecipherthemechanismofriceadaptationtophosphorousdeficiency |