An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain
The rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae (Xoo) constrains production in major rice growing countries of Asia. Xoo injects transcription activator-like effectors (TALEs) that bind to and activate host “susceptibility” (S) genes that are important for disease. The bacterial bli...
| Autores principales: | , , , , , , , , , , , , , , , |
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| Formato: | Journal Article |
| Lenguaje: | Inglés |
| Publicado: |
Frontiers Media
2020
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| Materias: | |
| Acceso en línea: | https://hdl.handle.net/10568/164410 |
| _version_ | 1855527556401332224 |
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| author | Carpenter, Sara C. D. Mishra, Prashant Ghoshal, Chandrika Dash, Prasanta K. Wang, Li Midha, Samriti Laha, Gouri S. Lore, Jagjeet S. Kositratana, Wichai Singh, Nagendra K. Singh, Kuldeep Patil, Prabhu B. Oliva, Ricardo Patarapuwadol, Sujin Bogdanove, Adam J. Rai, Rhitu |
| author_browse | Bogdanove, Adam J. Carpenter, Sara C. D. Dash, Prasanta K. Ghoshal, Chandrika Kositratana, Wichai Laha, Gouri S. Lore, Jagjeet S. Midha, Samriti Mishra, Prashant Oliva, Ricardo Patarapuwadol, Sujin Patil, Prabhu B. Rai, Rhitu Singh, Kuldeep Singh, Nagendra K. Wang, Li |
| author_facet | Carpenter, Sara C. D. Mishra, Prashant Ghoshal, Chandrika Dash, Prasanta K. Wang, Li Midha, Samriti Laha, Gouri S. Lore, Jagjeet S. Kositratana, Wichai Singh, Nagendra K. Singh, Kuldeep Patil, Prabhu B. Oliva, Ricardo Patarapuwadol, Sujin Bogdanove, Adam J. Rai, Rhitu |
| author_sort | Carpenter, Sara C. D. |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | The rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae (Xoo) constrains production in major rice growing countries of Asia. Xoo injects transcription activator-like effectors (TALEs) that bind to and activate host “susceptibility” (S) genes that are important for disease. The bacterial blight resistance gene xa5, which reduces TALE activity generally, has been widely deployed. However, strains defeating xa5 have been reported in India and recently also in Thailand. We completely sequenced and compared the genomes of one such strain from each country and examined the encoded TALEs. The two genomes are nearly identical, including the TALE genes, and belong to a previously identified, highly clonal lineage. Each strain harbors a TALE known to activate the major S gene SWEET11 strongly enough to be effective even when diminished by xa5. The findings suggest international migration of the xa5-compatible pathotype and highlight the utility of whole genome sequencing and TALE analysis for understanding and responding to breakdown of resistance. |
| format | Journal Article |
| id | CGSpace164410 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2020 |
| publishDateRange | 2020 |
| publishDateSort | 2020 |
| publisher | Frontiers Media |
| publisherStr | Frontiers Media |
| record_format | dspace |
| spelling | CGSpace1644102024-12-19T14:12:46Z An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain Carpenter, Sara C. D. Mishra, Prashant Ghoshal, Chandrika Dash, Prasanta K. Wang, Li Midha, Samriti Laha, Gouri S. Lore, Jagjeet S. Kositratana, Wichai Singh, Nagendra K. Singh, Kuldeep Patil, Prabhu B. Oliva, Ricardo Patarapuwadol, Sujin Bogdanove, Adam J. Rai, Rhitu microbiology The rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae (Xoo) constrains production in major rice growing countries of Asia. Xoo injects transcription activator-like effectors (TALEs) that bind to and activate host “susceptibility” (S) genes that are important for disease. The bacterial blight resistance gene xa5, which reduces TALE activity generally, has been widely deployed. However, strains defeating xa5 have been reported in India and recently also in Thailand. We completely sequenced and compared the genomes of one such strain from each country and examined the encoded TALEs. The two genomes are nearly identical, including the TALE genes, and belong to a previously identified, highly clonal lineage. Each strain harbors a TALE known to activate the major S gene SWEET11 strongly enough to be effective even when diminished by xa5. The findings suggest international migration of the xa5-compatible pathotype and highlight the utility of whole genome sequencing and TALE analysis for understanding and responding to breakdown of resistance. 2020-10-21 2024-12-19T12:53:51Z 2024-12-19T12:53:51Z Journal Article https://hdl.handle.net/10568/164410 en Open Access Frontiers Media Carpenter, Sara C. D.; Mishra, Prashant; Ghoshal, Chandrika; Dash, Prasanta K.; Wang, Li; Midha, Samriti; Laha, Gouri S.; Lore, Jagjeet S.; Kositratana, Wichai; Singh, Nagendra K.; Singh, Kuldeep; Patil, Prabhu B.; Oliva, Ricardo; Patarapuwadol, Sujin; Bogdanove, Adam J. and Rai, Rhitu. 2020. An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain. Front. Microbiol., Volume 11 |
| spellingShingle | microbiology Carpenter, Sara C. D. Mishra, Prashant Ghoshal, Chandrika Dash, Prasanta K. Wang, Li Midha, Samriti Laha, Gouri S. Lore, Jagjeet S. Kositratana, Wichai Singh, Nagendra K. Singh, Kuldeep Patil, Prabhu B. Oliva, Ricardo Patarapuwadol, Sujin Bogdanove, Adam J. Rai, Rhitu An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain |
| title | An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain |
| title_full | An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain |
| title_fullStr | An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain |
| title_full_unstemmed | An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain |
| title_short | An xa5 resistance gene-breaking indian strain of the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae is nearly identical to a Thai strain |
| title_sort | xa5 resistance gene breaking indian strain of the rice bacterial blight pathogen xanthomonas oryzae pv oryzae is nearly identical to a thai strain |
| topic | microbiology |
| url | https://hdl.handle.net/10568/164410 |
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