Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America
Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing...
| Main Authors: | , , , , |
|---|---|
| Format: | Conjunto de datos |
| Language: | Inglés |
| Published: |
2024
|
| Subjects: | |
| Online Access: | https://hdl.handle.net/10568/159282 |
| _version_ | 1855542465459650560 |
|---|---|
| author | Ospina Colorado, Jessica Alejandra Lopez Alvarez, Diana Carolina Gimode, Winnie Riziki Adu Wenzl, Peter Carvajal Yepes, Monica |
| author_browse | Carvajal Yepes, Monica Gimode, Winnie Riziki Adu Lopez Alvarez, Diana Carolina Ospina Colorado, Jessica Alejandra Wenzl, Peter |
| author_facet | Ospina Colorado, Jessica Alejandra Lopez Alvarez, Diana Carolina Gimode, Winnie Riziki Adu Wenzl, Peter Carvajal Yepes, Monica |
| author_sort | Ospina Colorado, Jessica Alejandra |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.
Metodology:DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance. |
| format | Conjunto de datos |
| id | CGSpace159282 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2024 |
| publishDateRange | 2024 |
| publishDateSort | 2024 |
| record_format | dspace |
| spelling | CGSpace1592822024-11-07T09:25:58Z Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America Ospina Colorado, Jessica Alejandra Lopez Alvarez, Diana Carolina Gimode, Winnie Riziki Adu Wenzl, Peter Carvajal Yepes, Monica breeding genetic resources conservation disease resistance ex situ conservation cassava brown streak disease Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases.Cassava (Manihot esculenta Crantz) is a vital carbohydrate source for over 800 million people globally, yet its production in East Africa is severely affected by cassava brown streak disease (CBSD). Genebanks, through ex-situ conservation, play a pivotal role in preserving crop diversity, providing crucial resources for breeding resilient and disease-resistant crops. This study genotyped 234 South American cassava accessions conserved at the CIAT genebank, previously phenotyped for CBSD resistance by an independent group, to perform a genome-wide association analysis (GWAS) to identify genetic variants associated with CBSD resistance. Our GWAS identified 28 single nucleotide polymorphism (SNP) markers distributed across various chromosomes, associated with disease severity or the presence/absence of viral infection. Markers were annotated within or near genes previously identified with functions related to pathogen recognition and immune response activation. Using the SNP candidates, we screened the world’s largest cassava collection for accessions with a higher frequency of favorable genotypes, proposing 35 accessions with potential resistance to CBSD. Our results provide insights into the genetics of CBSD resistance and highlight the importance of genetic resources to equip breeders with the raw materials needed to develop new crop varieties resistant to pests and diseases. Metodology:DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance.DNA was extracted from 234 accessions of Manihot esculenta, conserved at the CIAT genebank, which had previously been phenotyped by an independent group for CBSD resistance. The DNA was sent to DArT P/L for genotyping with DArTseq. Using the generated SNP data, we conducted a diversity analysis, population structure analysis, and genome-wide association study (GWAS) to identify genetic variants associated with CBSD resistance. 2024 2024-11-05T22:29:27Z 2024-11-05T22:29:27Z Dataset https://hdl.handle.net/10568/159282 en Open Access Ospina Colorado, J.A.; Lopez Alvarez, D.C.; Gimode, W.R.A.; Wenzl, P.; Carvajal Yepes, M. (2024) Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America. https://doi.org/10.7910/DVN/H4PDE5 |
| spellingShingle | breeding genetic resources conservation disease resistance ex situ conservation cassava brown streak disease Ospina Colorado, Jessica Alejandra Lopez Alvarez, Diana Carolina Gimode, Winnie Riziki Adu Wenzl, Peter Carvajal Yepes, Monica Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America |
| title | Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America |
| title_full | Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America |
| title_fullStr | Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America |
| title_full_unstemmed | Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America |
| title_short | Data: Genome-wide association study of cassava brown streak disease resistance in cassava germplasm conserved in South America |
| title_sort | data genome wide association study of cassava brown streak disease resistance in cassava germplasm conserved in south america |
| topic | breeding genetic resources conservation disease resistance ex situ conservation cassava brown streak disease |
| url | https://hdl.handle.net/10568/159282 |
| work_keys_str_mv | AT ospinacoloradojessicaalejandra datagenomewideassociationstudyofcassavabrownstreakdiseaseresistanceincassavagermplasmconservedinsouthamerica AT lopezalvarezdianacarolina datagenomewideassociationstudyofcassavabrownstreakdiseaseresistanceincassavagermplasmconservedinsouthamerica AT gimodewinnierizikiadu datagenomewideassociationstudyofcassavabrownstreakdiseaseresistanceincassavagermplasmconservedinsouthamerica AT wenzlpeter datagenomewideassociationstudyofcassavabrownstreakdiseaseresistanceincassavagermplasmconservedinsouthamerica AT carvajalyepesmonica datagenomewideassociationstudyofcassavabrownstreakdiseaseresistanceincassavagermplasmconservedinsouthamerica |