Available cloned genes and markers for genetic improvement of biotic stress resistance in rice
Biotic stress is one of the major threats to stable rice production. Climate change affects the shifting of pest outbreaks in time and space. Genetic improvement of biotic stress resistance in rice is a cost-effective and environment-friendly way to control diseases and pests compared to other metho...
| Autores principales: | , , , , , , , , , , |
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| Formato: | Journal Article |
| Lenguaje: | Inglés |
| Publicado: |
Frontiers Media
2023
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| Materias: | |
| Acceso en línea: | https://hdl.handle.net/10568/132725 |
| _version_ | 1855521106397495296 |
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| author | Simon, Eliza Vie Hechanova, Sherry Lou Hernandez, Jose E. Li, Charng-Pe Tülek, Adnan Ahn, Eok-Keun Jairin, Jirapong Choi, Il-Ryong Sundaram, Raman M. Jena, Kshirod K. Kim, Sung-Ryul |
| author_browse | Ahn, Eok-Keun Choi, Il-Ryong Hechanova, Sherry Lou Hernandez, Jose E. Jairin, Jirapong Jena, Kshirod K. Kim, Sung-Ryul Li, Charng-Pe Simon, Eliza Vie Sundaram, Raman M. Tülek, Adnan |
| author_facet | Simon, Eliza Vie Hechanova, Sherry Lou Hernandez, Jose E. Li, Charng-Pe Tülek, Adnan Ahn, Eok-Keun Jairin, Jirapong Choi, Il-Ryong Sundaram, Raman M. Jena, Kshirod K. Kim, Sung-Ryul |
| author_sort | Simon, Eliza Vie |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | Biotic stress is one of the major threats to stable rice production. Climate change affects the shifting of pest outbreaks in time and space. Genetic improvement of biotic stress resistance in rice is a cost-effective and environment-friendly way to control diseases and pests compared to other methods such as chemical spraying. Fast deployment of the available and suitable genes/alleles in local elite varieties through marker-assisted selection (MAS) is crucial for stable high-yield rice production. In this review, we focused on consolidating all the available cloned genes/alleles conferring resistance against rice pathogens (virus, bacteria, and fungus) and insect pests, the corresponding donor materials, and the DNA markers linked to the identified genes. To date, 48 genes (independent loci) have been cloned for only major biotic stresses: seven genes for brown planthopper (BPH), 23 for blast, 13 for bacterial blight, and five for viruses. Physical locations of the 48 genes were graphically mapped on the 12 rice chromosomes so that breeders can easily find the locations of the target genes and distances among all the biotic stress resistance genes and any other target trait genes. For efficient use of the cloned genes, we collected all the publically available DNA markers (~500 markers) linked to the identified genes. In case of no available cloned genes yet for the other biotic stresses, we provided brief information such as donor germplasm, quantitative trait loci (QTLs), and the related papers. All the information described in this review can contribute to the fast genetic improvement of biotic stress resistance in rice for stable high-yield rice production. |
| format | Journal Article |
| id | CGSpace132725 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2023 |
| publishDateRange | 2023 |
| publishDateSort | 2023 |
| publisher | Frontiers Media |
| publisherStr | Frontiers Media |
| record_format | dspace |
| spelling | CGSpace1327252025-12-08T10:29:22Z Available cloned genes and markers for genetic improvement of biotic stress resistance in rice Simon, Eliza Vie Hechanova, Sherry Lou Hernandez, Jose E. Li, Charng-Pe Tülek, Adnan Ahn, Eok-Keun Jairin, Jirapong Choi, Il-Ryong Sundaram, Raman M. Jena, Kshirod K. Kim, Sung-Ryul biotic stress climate change genetic improvement rice diseases viruses pests bacteria fungus blast loci dna cloning quantitative trait loci yield stability marker-assisted selection nilaparvata lugens Biotic stress is one of the major threats to stable rice production. Climate change affects the shifting of pest outbreaks in time and space. Genetic improvement of biotic stress resistance in rice is a cost-effective and environment-friendly way to control diseases and pests compared to other methods such as chemical spraying. Fast deployment of the available and suitable genes/alleles in local elite varieties through marker-assisted selection (MAS) is crucial for stable high-yield rice production. In this review, we focused on consolidating all the available cloned genes/alleles conferring resistance against rice pathogens (virus, bacteria, and fungus) and insect pests, the corresponding donor materials, and the DNA markers linked to the identified genes. To date, 48 genes (independent loci) have been cloned for only major biotic stresses: seven genes for brown planthopper (BPH), 23 for blast, 13 for bacterial blight, and five for viruses. Physical locations of the 48 genes were graphically mapped on the 12 rice chromosomes so that breeders can easily find the locations of the target genes and distances among all the biotic stress resistance genes and any other target trait genes. For efficient use of the cloned genes, we collected all the publically available DNA markers (~500 markers) linked to the identified genes. In case of no available cloned genes yet for the other biotic stresses, we provided brief information such as donor germplasm, quantitative trait loci (QTLs), and the related papers. All the information described in this review can contribute to the fast genetic improvement of biotic stress resistance in rice for stable high-yield rice production. 2023-09-09 2023-11-04T13:41:31Z 2023-11-04T13:41:31Z Journal Article https://hdl.handle.net/10568/132725 en Open Access application/pdf Frontiers Media Simon, Eliza Vie, Sherry Lou Hechanova, Jose E. Hernandez, Charng-Pei Li, Adnan Tülek, Eok-Keun Ahn, Jirapong Jairin et al. "Available cloned genes and markers for genetic improvement of biotic stress resistance in rice." Frontiers in Plant Science 14 (2023). |
| spellingShingle | biotic stress climate change genetic improvement rice diseases viruses pests bacteria fungus blast loci dna cloning quantitative trait loci yield stability marker-assisted selection nilaparvata lugens Simon, Eliza Vie Hechanova, Sherry Lou Hernandez, Jose E. Li, Charng-Pe Tülek, Adnan Ahn, Eok-Keun Jairin, Jirapong Choi, Il-Ryong Sundaram, Raman M. Jena, Kshirod K. Kim, Sung-Ryul Available cloned genes and markers for genetic improvement of biotic stress resistance in rice |
| title | Available cloned genes and markers for genetic improvement of biotic stress resistance in rice |
| title_full | Available cloned genes and markers for genetic improvement of biotic stress resistance in rice |
| title_fullStr | Available cloned genes and markers for genetic improvement of biotic stress resistance in rice |
| title_full_unstemmed | Available cloned genes and markers for genetic improvement of biotic stress resistance in rice |
| title_short | Available cloned genes and markers for genetic improvement of biotic stress resistance in rice |
| title_sort | available cloned genes and markers for genetic improvement of biotic stress resistance in rice |
| topic | biotic stress climate change genetic improvement rice diseases viruses pests bacteria fungus blast loci dna cloning quantitative trait loci yield stability marker-assisted selection nilaparvata lugens |
| url | https://hdl.handle.net/10568/132725 |
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