Phased, chromosome-scale genome assemblies of tetraploid potato reveals a complex genome, transcriptome, and predicted proteome landscape underpinning genetic diversity

Cultivated potato is a clonally propagated autotetraploid species with a highly heterogeneous genome. Phased assemblies of six cultivars including two chromosome-scale phased genome assemblies revealed extensive allelic diversity including altered coding and transcript sequences, preferential allele...

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Main Authors:	Hoopes, G., Meng, X., Hamilton, J.P., Achakkagari, S.R., Brito Ribeiro, Mauro César Lambert de, Bolger, M.E., Coombs, J.J., Esselink, D., Kaiser, N.R., Kodde, L., Kyriakidou, M., Lavrijssen, B., Lieshout, N. van, Shereda, R., Tuttle, H.K., Vaillancourt, B., Wood, J.C., Boer, J.M de, Bornowski, N., Bourke, P., Douches, D., Eck, H.J. van, Ellis, David, Feldman, M.J., Gardner, K.M., Hopman, J.C.P., Jiang, J., Jong, W.S. de, Kuhl, J.C., Novy, R.G., Oome, S., Sathuvalli, V., Tan, E.H., Ursum, R.A., Vales, M.I., Vining, K., Visser, Richard G.F., Vossen, J., Yencho, George Craig, Anglin, N.L, Bachem, C.W.B., Endelman, J.B., Shannon, L.M., Stromvik, M.V., Tai, H.H., Usadel, B., Buell, C.R., Finkers, R.
Format:	Journal Article
Language:	Inglés
Published:	Elsevier 2022
Subjects:	potatoes polyploidy alleles genomes genetic variation molecular biology
Online Access:	https://hdl.handle.net/10568/118050