Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance
This dataset contains phenotypic and genotypic data of an interspecific genetic mapping population between P. vulgaris and P. acutifolius using the bridge genotype VAP 1. The population is composed by 14 crosses including five Mesoamerican elite common bean (SMR 155, SEF 10, SMC 214, ICTA Ligero, an...
| Autores principales: | , , , , , , , , , , |
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| Formato: | Conjunto de datos |
| Lenguaje: | Inglés |
| Publicado: |
2021
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| Materias: | |
| Acceso en línea: | https://hdl.handle.net/10568/114550 |
| _version_ | 1855516257243103232 |
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| author | Cruz Ruiz, Sergio Andres Aparicio, Johan Steven Ariza-Suárez, Daniel Espitia, Ernesto Raatz, Bodo Macea Choperena, Eliana del Pilar Milan, Urban Soto, Jonatan Stivens Cajiao V., César Hernando Mosquera Cifuentes, Gloria Maria Beebe, Stephen E. |
| author_browse | Aparicio, Johan Steven Ariza-Suárez, Daniel Beebe, Stephen E. Cajiao V., César Hernando Cruz Ruiz, Sergio Andres Espitia, Ernesto Macea Choperena, Eliana del Pilar Milan, Urban Mosquera Cifuentes, Gloria Maria Raatz, Bodo Soto, Jonatan Stivens |
| author_facet | Cruz Ruiz, Sergio Andres Aparicio, Johan Steven Ariza-Suárez, Daniel Espitia, Ernesto Raatz, Bodo Macea Choperena, Eliana del Pilar Milan, Urban Soto, Jonatan Stivens Cajiao V., César Hernando Mosquera Cifuentes, Gloria Maria Beebe, Stephen E. |
| author_sort | Cruz Ruiz, Sergio Andres |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | This dataset contains phenotypic and genotypic data of an interspecific genetic mapping population between P. vulgaris and P. acutifolius using the bridge genotype VAP 1. The population is composed by 14 crosses including five Mesoamerican elite common bean (SMR 155, SEF 10, SMC 214, ICTA Ligero, and SEN 118) and two wild P. acutifolius parents (G40056 and G40287). The main goal of this population is understand the effect of introgressions from P. acutifolius in the heat tolerance of Common Bean. The raw phenotypic data comes from one trial carried out at CIAT HQ in Palmira(Colombia) where the interspecific population was tested in two greenhouses with night temperatures regulated at 25C and a control environment. In this trial several agronomic traits were measured including yield per hectare (YdHa), pod harvest index (PHI), seed weight (SW), seeds per pod (PSN) and pod number (PN). The agronomic performance of the population was modeled using linear mixed models with spatial correction. From these models, best linear unbiased estimators / predictors were obtained (BLUEs/BLUPs). The genotypic file is a VCF that includes 36,839 SNPs for 261 interspecific families and 8 founders. |
| format | Conjunto de datos |
| id | CGSpace114550 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2021 |
| publishDateRange | 2021 |
| publishDateSort | 2021 |
| record_format | dspace |
| spelling | CGSpace1145502024-09-09T10:04:48Z Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance Cruz Ruiz, Sergio Andres Aparicio, Johan Steven Ariza-Suárez, Daniel Espitia, Ernesto Raatz, Bodo Macea Choperena, Eliana del Pilar Milan, Urban Soto, Jonatan Stivens Cajiao V., César Hernando Mosquera Cifuentes, Gloria Maria Beebe, Stephen E. genotyping quantitative trait loci phaseolus acutifolius kidney beans genotipado loci de rasgos cuantitativos fríjol (phaseolus) This dataset contains phenotypic and genotypic data of an interspecific genetic mapping population between P. vulgaris and P. acutifolius using the bridge genotype VAP 1. The population is composed by 14 crosses including five Mesoamerican elite common bean (SMR 155, SEF 10, SMC 214, ICTA Ligero, and SEN 118) and two wild P. acutifolius parents (G40056 and G40287). The main goal of this population is understand the effect of introgressions from P. acutifolius in the heat tolerance of Common Bean. The raw phenotypic data comes from one trial carried out at CIAT HQ in Palmira(Colombia) where the interspecific population was tested in two greenhouses with night temperatures regulated at 25C and a control environment. In this trial several agronomic traits were measured including yield per hectare (YdHa), pod harvest index (PHI), seed weight (SW), seeds per pod (PSN) and pod number (PN). The agronomic performance of the population was modeled using linear mixed models with spatial correction. From these models, best linear unbiased estimators / predictors were obtained (BLUEs/BLUPs). The genotypic file is a VCF that includes 36,839 SNPs for 261 interspecific families and 8 founders. 2021-08 2021-08-04T08:53:10Z 2021-08-04T08:53:10Z Dataset https://hdl.handle.net/10568/114550 en Open Access image/jpeg Cruz Ruiz, S.; Aparicio, J.; Ariza-Suarez, Daniel; Espitia, E.; Raatz, Bodo; Macea Choperena, Eliana del Pilar; Milan, Urban; Soto, Jonatan Stivens; Cajiao, Cesar; Mosquera Cifuentes, G.M.; Beebe, S. (2021) Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance. https://doi.org/10.7910/DVN/LX7PRK |
| spellingShingle | genotyping quantitative trait loci phaseolus acutifolius kidney beans genotipado loci de rasgos cuantitativos fríjol (phaseolus) Cruz Ruiz, Sergio Andres Aparicio, Johan Steven Ariza-Suárez, Daniel Espitia, Ernesto Raatz, Bodo Macea Choperena, Eliana del Pilar Milan, Urban Soto, Jonatan Stivens Cajiao V., César Hernando Mosquera Cifuentes, Gloria Maria Beebe, Stephen E. Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance |
| title | Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance |
| title_full | Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance |
| title_fullStr | Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance |
| title_full_unstemmed | Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance |
| title_short | Using bean populations derived from P. acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance |
| title_sort | using bean populations derived from p acutifolius to advance toward generation of new bean varieties and discerning the traits and genetic base associated to heat tolerance |
| topic | genotyping quantitative trait loci phaseolus acutifolius kidney beans genotipado loci de rasgos cuantitativos fríjol (phaseolus) |
| url | https://hdl.handle.net/10568/114550 |
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