Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing
High-throughput sequence analysis revealed the complete genome sequence of a novel, hitherto uncharacterized strain of Chickpea chlorotic dwarf virus (CpCDV) from tomato plants in Kenya. The sequence shared its highest nucleotide similarity (88.7%) with two CpCDV isolates from Burkina Faso.
| Autores principales: | , , , , , , , |
|---|---|
| Formato: | Journal Article |
| Lenguaje: | Inglés |
| Publicado: |
American Society for Microbiology
2020
|
| Materias: | |
| Acceso en línea: | https://hdl.handle.net/10568/110661 |
| _version_ | 1855541812092993536 |
|---|---|
| author | Avedi, E.K. Kilalo, C.D. Olubayo, F.M. Macharia, I. Adediji, A.O. Ateka, E.M. Machuka, Eunice M. Mutuku, Josiah M. |
| author_browse | Adediji, A.O. Ateka, E.M. Avedi, E.K. Kilalo, C.D. Macharia, I. Machuka, Eunice M. Mutuku, Josiah M. Olubayo, F.M. |
| author_facet | Avedi, E.K. Kilalo, C.D. Olubayo, F.M. Macharia, I. Adediji, A.O. Ateka, E.M. Machuka, Eunice M. Mutuku, Josiah M. |
| author_sort | Avedi, E.K. |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | High-throughput sequence analysis revealed the complete genome sequence of a novel, hitherto uncharacterized strain of Chickpea chlorotic dwarf virus (CpCDV) from tomato plants in Kenya. The sequence shared its highest nucleotide similarity (88.7%) with two CpCDV isolates from Burkina Faso. |
| format | Journal Article |
| id | CGSpace110661 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2020 |
| publishDateRange | 2020 |
| publishDateSort | 2020 |
| publisher | American Society for Microbiology |
| publisherStr | American Society for Microbiology |
| record_format | dspace |
| spelling | CGSpace1106612025-12-02T10:59:51Z Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing Avedi, E.K. Kilalo, C.D. Olubayo, F.M. Macharia, I. Adediji, A.O. Ateka, E.M. Machuka, Eunice M. Mutuku, Josiah M. chickpeas solanum lycopersicum plant viruses High-throughput sequence analysis revealed the complete genome sequence of a novel, hitherto uncharacterized strain of Chickpea chlorotic dwarf virus (CpCDV) from tomato plants in Kenya. The sequence shared its highest nucleotide similarity (88.7%) with two CpCDV isolates from Burkina Faso. 2020-01-30 2020-12-29T09:22:39Z 2020-12-29T09:22:39Z Journal Article https://hdl.handle.net/10568/110661 en Open Access American Society for Microbiology Avedi, E.K., Kilalo, C.D., Olubayo, F.M., Macharia, I., Adediji, A.O., Ateka, E.M., Machuka, E.M. and Mutuku, J.M. 2020. Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing. Microbiology Resource Announcements 9(5):e01344-19. |
| spellingShingle | chickpeas solanum lycopersicum plant viruses Avedi, E.K. Kilalo, C.D. Olubayo, F.M. Macharia, I. Adediji, A.O. Ateka, E.M. Machuka, Eunice M. Mutuku, Josiah M. Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing |
| title | Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing |
| title_full | Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing |
| title_fullStr | Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing |
| title_full_unstemmed | Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing |
| title_short | Complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in Kenya, obtained from llumina sequencing |
| title_sort | complete genome sequence of a new chickpea chlorotic dwarf virus strain isolated from tomato in kenya obtained from llumina sequencing |
| topic | chickpeas solanum lycopersicum plant viruses |
| url | https://hdl.handle.net/10568/110661 |
| work_keys_str_mv | AT avediek completegenomesequenceofanewchickpeachloroticdwarfvirusstrainisolatedfromtomatoinkenyaobtainedfromlluminasequencing AT kilalocd completegenomesequenceofanewchickpeachloroticdwarfvirusstrainisolatedfromtomatoinkenyaobtainedfromlluminasequencing AT olubayofm completegenomesequenceofanewchickpeachloroticdwarfvirusstrainisolatedfromtomatoinkenyaobtainedfromlluminasequencing AT machariai completegenomesequenceofanewchickpeachloroticdwarfvirusstrainisolatedfromtomatoinkenyaobtainedfromlluminasequencing AT adedijiao completegenomesequenceofanewchickpeachloroticdwarfvirusstrainisolatedfromtomatoinkenyaobtainedfromlluminasequencing AT atekaem completegenomesequenceofanewchickpeachloroticdwarfvirusstrainisolatedfromtomatoinkenyaobtainedfromlluminasequencing AT machukaeunicem completegenomesequenceofanewchickpeachloroticdwarfvirusstrainisolatedfromtomatoinkenyaobtainedfromlluminasequencing AT mutukujosiahm completegenomesequenceofanewchickpeachloroticdwarfvirusstrainisolatedfromtomatoinkenyaobtainedfromlluminasequencing |