New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa
Microsatellites were designed and characterized in the African fruit tree species Dacryodes edulis (Burseraceae). The fruits are commercialized throughout Central Africa and the species is present in forested environments as well as cultivated systems. The high variability of these markers makes the...
| Autores principales: | , , , , , , , |
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| Formato: | Journal Article |
| Lenguaje: | Inglés |
| Publicado: |
Springer
2020
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| Materias: | |
| Acceso en línea: | https://hdl.handle.net/10568/109187 |
| _version_ | 1855526972633907200 |
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| author | Rimlinger, Aurore Marie, Lison Avana-Tientcheu, Marie Louise Bouka Dipelet, Ulrich G. Zekraoui, Leila Cedric, Mariac Carrière, Stéphanie Duminil, Jérôme |
| author_browse | Avana-Tientcheu, Marie Louise Bouka Dipelet, Ulrich G. Carrière, Stéphanie Cedric, Mariac Duminil, Jérôme Marie, Lison Rimlinger, Aurore Zekraoui, Leila |
| author_facet | Rimlinger, Aurore Marie, Lison Avana-Tientcheu, Marie Louise Bouka Dipelet, Ulrich G. Zekraoui, Leila Cedric, Mariac Carrière, Stéphanie Duminil, Jérôme |
| author_sort | Rimlinger, Aurore |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | Microsatellites were designed and characterized in the African fruit tree species Dacryodes edulis (Burseraceae). The fruits are commercialized throughout Central Africa and the species is present in forested environments as well as cultivated systems. The high variability of these markers makes them suitable to investigate the structure of genetic diversity in this important food tree species from Central Africa. From a genomic library obtained by next-generation sequencing, 21 new polymorphic microsatellite loci were developed. Tested on 95 individuals from four populations coming from three countries of the Congo Basin, the microsatellites displayed two to 20 alleles (mean 7.5; expected heterozygosity 0.003 to 0.937, mean 0.666). The transferability of microsatellites was effective for four other Dacryodes species (D. buettneri, D. igaganga, D. osika, D. pubescens). This set of newly developed microsatellite markers will be useful for assessing the genetic diversity and differentiation as well as gene flow patterns of D. edulis in tropical forests from Central Africa. |
| format | Journal Article |
| id | CGSpace109187 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2020 |
| publishDateRange | 2020 |
| publishDateSort | 2020 |
| publisher | Springer |
| publisherStr | Springer |
| record_format | dspace |
| spelling | CGSpace1091872025-11-12T05:42:37Z New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa Rimlinger, Aurore Marie, Lison Avana-Tientcheu, Marie Louise Bouka Dipelet, Ulrich G. Zekraoui, Leila Cedric, Mariac Carrière, Stéphanie Duminil, Jérôme burseraceae microsatellites tree crops daycrodes microsatélites cultivos leñosos Microsatellites were designed and characterized in the African fruit tree species Dacryodes edulis (Burseraceae). The fruits are commercialized throughout Central Africa and the species is present in forested environments as well as cultivated systems. The high variability of these markers makes them suitable to investigate the structure of genetic diversity in this important food tree species from Central Africa. From a genomic library obtained by next-generation sequencing, 21 new polymorphic microsatellite loci were developed. Tested on 95 individuals from four populations coming from three countries of the Congo Basin, the microsatellites displayed two to 20 alleles (mean 7.5; expected heterozygosity 0.003 to 0.937, mean 0.666). The transferability of microsatellites was effective for four other Dacryodes species (D. buettneri, D. igaganga, D. osika, D. pubescens). This set of newly developed microsatellite markers will be useful for assessing the genetic diversity and differentiation as well as gene flow patterns of D. edulis in tropical forests from Central Africa. 2020-03 2020-09-03T07:42:26Z 2020-09-03T07:42:26Z Journal Article https://hdl.handle.net/10568/109187 en Open Access application/pdf Springer Rimlinger, A.; Marie, L.; Avana, M.; Bouka Dipelet, U.; Zekraoui, L.; Mariac, C.; Carrière, S.M.; Duminil, J. (2020) New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa. Molecular Biology Reports 47 p. 2391–2396 ISSN: 0301 4851 |
| spellingShingle | burseraceae microsatellites tree crops daycrodes microsatélites cultivos leñosos Rimlinger, Aurore Marie, Lison Avana-Tientcheu, Marie Louise Bouka Dipelet, Ulrich G. Zekraoui, Leila Cedric, Mariac Carrière, Stéphanie Duminil, Jérôme New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa |
| title | New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa |
| title_full | New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa |
| title_fullStr | New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa |
| title_full_unstemmed | New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa |
| title_short | New microsatellite markers for Dacryodes edulis (Burseraceae), an indigenous fruit tree species from Central Africa |
| title_sort | new microsatellite markers for dacryodes edulis burseraceae an indigenous fruit tree species from central africa |
| topic | burseraceae microsatellites tree crops daycrodes microsatélites cultivos leñosos |
| url | https://hdl.handle.net/10568/109187 |
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