Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions
We assessed the diversity, structure, and assemblage of bacterial and fungal communities associated with banana plants with and without Fusarium oxysporum f. sp. cubense (Foc) symptoms. A total of 117,814 bacterial and 17,317 fungal operational taxonomy units (OTUs) were identified in the rhizosphere...
| Main Authors: | , , |
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| Format: | Journal Article |
| Language: | Inglés |
| Published: |
MDPI
2020
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| Subjects: | |
| Online Access: | https://hdl.handle.net/10568/107933 |
| _version_ | 1855538337123663872 |
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| author | Kaushal, Manoj Swennen, Rony L. Mahuku, George S. |
| author_browse | Kaushal, Manoj Mahuku, George S. Swennen, Rony L. |
| author_facet | Kaushal, Manoj Swennen, Rony L. Mahuku, George S. |
| author_sort | Kaushal, Manoj |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | We assessed the diversity, structure, and assemblage of bacterial and fungal communities associated with banana plants with and without Fusarium oxysporum f. sp. cubense (Foc) symptoms. A total of 117,814 bacterial and 17,317 fungal operational taxonomy units (OTUs) were identified in the rhizosphere, roots, and corm of the host plant. Results revealed that bacterial and fungal microbiota present in roots and corm primarily emanated from the rhizosphere. The composition of bacterial communities in the rhizosphere, roots, and corm were different, with more diversity observed in the rhizosphere and less in the corm. However, distinct sample types i.e., without (asymptomatic) and with (symptomatic) Fusarium symptoms were the major drivers of the fungal community composition. Considering the high relative abundance among samples, we identified core microbiomes with bacterial and fungal OTUs classified into 20 families and colonizing distinct plant components of banana. Our core microbiome assigned 129 bacterial and 37 fungal genera to known taxa. |
| format | Journal Article |
| id | CGSpace107933 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2020 |
| publishDateRange | 2020 |
| publishDateSort | 2020 |
| publisher | MDPI |
| publisherStr | MDPI |
| record_format | dspace |
| spelling | CGSpace1079332025-11-13T10:39:09Z Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions Kaushal, Manoj Swennen, Rony L. Mahuku, George S. musa panama disease fusarium wilt rhizosphere bacteria control biological contamination fusarium oxysporum enfermedad de panama fusariosis We assessed the diversity, structure, and assemblage of bacterial and fungal communities associated with banana plants with and without Fusarium oxysporum f. sp. cubense (Foc) symptoms. A total of 117,814 bacterial and 17,317 fungal operational taxonomy units (OTUs) were identified in the rhizosphere, roots, and corm of the host plant. Results revealed that bacterial and fungal microbiota present in roots and corm primarily emanated from the rhizosphere. The composition of bacterial communities in the rhizosphere, roots, and corm were different, with more diversity observed in the rhizosphere and less in the corm. However, distinct sample types i.e., without (asymptomatic) and with (symptomatic) Fusarium symptoms were the major drivers of the fungal community composition. Considering the high relative abundance among samples, we identified core microbiomes with bacterial and fungal OTUs classified into 20 families and colonizing distinct plant components of banana. Our core microbiome assigned 129 bacterial and 37 fungal genera to known taxa. 2020-03-20 2020-04-03T11:07:34Z 2020-04-03T11:07:34Z Journal Article https://hdl.handle.net/10568/107933 en Open Access application/pdf MDPI Kaushal, M.; Swennen, R.; Mahuku, G. (2020) Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions. Microorganisms 8(3), 443. ISSN: 2076-2607 |
| spellingShingle | musa panama disease fusarium wilt rhizosphere bacteria control biological contamination fusarium oxysporum enfermedad de panama fusariosis Kaushal, Manoj Swennen, Rony L. Mahuku, George S. Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions |
| title | Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions |
| title_full | Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions |
| title_fullStr | Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions |
| title_full_unstemmed | Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions |
| title_short | Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions |
| title_sort | unlocking the microbiome communities of banana musa spp under disease stressed fusarium wilt and non stressed conditions |
| topic | musa panama disease fusarium wilt rhizosphere bacteria control biological contamination fusarium oxysporum enfermedad de panama fusariosis |
| url | https://hdl.handle.net/10568/107933 |
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