Plant pangenome: impacts on phenotypes and evolution
With the emergence of low‐cost high‐throughput sequencing technologies, numerous studies have shown that a single genome is not enough to identify all the genes present in a species. Recently, the pangenome concept has become widely used to investigate genome composition of a collection of individua...
| Autores principales: | , , |
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| Formato: | Journal Article |
| Lenguaje: | Inglés |
| Publicado: |
Wiley
2019
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| Materias: | |
| Acceso en línea: | https://hdl.handle.net/10568/103443 |
| _version_ | 1855533223738605568 |
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| author | Tranchant-Dubreuil, C. Rouard, M. Sabot, François |
| author_browse | Rouard, M. Sabot, François Tranchant-Dubreuil, C. |
| author_facet | Tranchant-Dubreuil, C. Rouard, M. Sabot, François |
| author_sort | Tranchant-Dubreuil, C. |
| collection | Repository of Agricultural Research Outputs (CGSpace) |
| description | With the emergence of low‐cost high‐throughput sequencing technologies, numerous studies have shown that a single genome is not enough to identify all the genes present in a species. Recently, the pangenome concept has become widely used to investigate genome composition of a collection of individuals. The pangenome consists in the core genome, which encompasses all the sequences shared by all the individuals, and the dispensable genome, composed of sequences present in only some individuals. Pangenomic analyses open new ways to investigate and compare multiple genomes of closely related individuals at once, and more broadly new opportunities for optimising breeding and studying evolution. This emerging concept combined with the power of the third‐generation sequencing technologies gives unprecedented opportunities to uncover new genes, to fully explore genetic diversity and to advance knowledge about the evolutionary forces that shape genome organisation and dynamics. |
| format | Journal Article |
| id | CGSpace103443 |
| institution | CGIAR Consortium |
| language | Inglés |
| publishDate | 2019 |
| publishDateRange | 2019 |
| publishDateSort | 2019 |
| publisher | Wiley |
| publisherStr | Wiley |
| record_format | dspace |
| spelling | CGSpace1034432024-08-27T10:36:38Z Plant pangenome: impacts on phenotypes and evolution Tranchant-Dubreuil, C. Rouard, M. Sabot, François evolution genomes methods genetic variation adaptation population genetics With the emergence of low‐cost high‐throughput sequencing technologies, numerous studies have shown that a single genome is not enough to identify all the genes present in a species. Recently, the pangenome concept has become widely used to investigate genome composition of a collection of individuals. The pangenome consists in the core genome, which encompasses all the sequences shared by all the individuals, and the dispensable genome, composed of sequences present in only some individuals. Pangenomic analyses open new ways to investigate and compare multiple genomes of closely related individuals at once, and more broadly new opportunities for optimising breeding and studying evolution. This emerging concept combined with the power of the third‐generation sequencing technologies gives unprecedented opportunities to uncover new genes, to fully explore genetic diversity and to advance knowledge about the evolutionary forces that shape genome organisation and dynamics. 2019 2019-08-29T08:59:40Z 2019-08-29T08:59:40Z Journal Article https://hdl.handle.net/10568/103443 en Limited Access Wiley Tranchant-Dubreuil, C.; Rouard, M.; Sabot, F. (2019) Plant pangenome: impacts on phenotypes and evolution. Annual Plant Reviews, 2. Online first paper (May 2019). ISSN: 2639-3832 |
| spellingShingle | evolution genomes methods genetic variation adaptation population genetics Tranchant-Dubreuil, C. Rouard, M. Sabot, François Plant pangenome: impacts on phenotypes and evolution |
| title | Plant pangenome: impacts on phenotypes and evolution |
| title_full | Plant pangenome: impacts on phenotypes and evolution |
| title_fullStr | Plant pangenome: impacts on phenotypes and evolution |
| title_full_unstemmed | Plant pangenome: impacts on phenotypes and evolution |
| title_short | Plant pangenome: impacts on phenotypes and evolution |
| title_sort | plant pangenome impacts on phenotypes and evolution |
| topic | evolution genomes methods genetic variation adaptation population genetics |
| url | https://hdl.handle.net/10568/103443 |
| work_keys_str_mv | AT tranchantdubreuilc plantpangenomeimpactsonphenotypesandevolution AT rouardm plantpangenomeimpactsonphenotypesandevolution AT sabotfrancois plantpangenomeimpactsonphenotypesandevolution |