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Zn uptake behavior of rice genotypes and its implication on grain Zn biofortification by Johnson-Beebout, Sarah E., Goloran, Johnvie Bayang, Rubianes, Francis H. C., Jacob, Jack D. C., Castillo, Oliver B.

“…Furthermore, the highest grain Zn concentration (P < 0.05) was produced by a combination of IR69428 and Zn fertilization applied at panicle initiation (38.5 μg g−1) compared with other treatments (P < 0.05). …”
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Leaf emergence, tillering, plant growth, and yield in response to plant density in a high-yielding aerobic rice crop by Clerget, Benoit, Bueno, Crisanta, Domingo, Abigail J., Layaoen, Heathel L., Vial, Leigh

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The dark side of the genome: revealing the native transposable element/repeat content of eukaryotic genomes by Copetti, Dario, Wing, Rod A.

“…To address this problem, we developed a method to detect and quantify the dark side of the genome and used it to infer the genomic composition and dynamic evolution of the majority of native repeats and TEs present within several test eukaryotic genomes.…”
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Development of high-yielding rice varieties suitable for swampy lands in Indonesia by Rumanti, Indrastuti A., Nugraha, Yudhistira, Wening, Rina H., Gonzaga, Zennia Jean C., Suwarno, Nasution, Anggiani, Kusdiaman, Dede, Septiningsih, Endang M.

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Rice SNP-seek database update: new SNPs, indels, and queries by Mansueto, Locedie, Fuentes, Roven Rommel, Borja, Frances Nikki, Detras, Jeffery, Abriol-Santos, Juan Miguel, Chebotarov, Dmytro, Sanciangco, Millicent, Palis, Kevin, Copetti, Dario, Poliakov, Alexandre, Dubchak, Inna, Solovyev, Victor, Wing, Rod A., Hamilton, Ruaraidh Sackville, Mauleon, Ramil, McNally, Kenneth L., Alexandrov, Nickolai

“…Besides the Nipponbare reference genome, the pipeline was run on genome assemblies of IR 64, 93-11, DJ 123 and Kasalath. New genotype query and display features are added for reference assemblies, SNP datasets and indels. …”
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Diurnal solar energy conversion and photoprotection in rice canopies by Meacham, K., Sirault, X., Quick, W. Paul, Caemmerer, S. von, Furbank, R.

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CRISPR-Cas9 mediated genome editing in rice, advancements and future possibilities by Mazumdar, Shamik, Quick, W. Paul, Bandyopadhyay, Anindya

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Reproductive stage salinity tolerance in rice: a complex trait to phenotype by Ahmadizadeh, Mostafa, Vispo, Naireen A., Calapit-Palao, Cecilia Diana O., Pangaan, Iris Dawn, Viña, Celia Dela, Singh, Rakesh K.

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Systems genetics identifies a novel regulatory domain of amylose synthesis by Butardo, V.M., Anacleto, R., Parween, S., Samson, I., de Guzman, K., Alhambra, C.M., Misra, G., Sreenivasulu, N.

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Effect of rates and sources of nitrogen on rice yield, nitrogen efficiency, and methane emission from irrigated rice cultivation by Ku, Hyun-Hwoi, Hayashi, Keiichi, Agbisit, Ruth, Villegas-Pangga, Gina

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Intra-household access to livestock information and financial services in Kenya by Mburu, S., Njuki, Jemimah, Kariuki, Juliet B.

“…Men borrowed more from formal credit providers such as banks and co-operatives while women mainly borrowed from their community groups and neighbors. …”
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VRS2 regulates hormone-mediated inflorescence patterning in barley by Youssef, Helmy M., Eggert, Kai, Koppolu, Ravi, Alqudah, Ahmad M., Poursarebani, Naser, Fazeli, Arash, Sakuma, Shun, Tagiri, Akemi, Rutten, Twan, Govind, Geetha, Lundqvist, Udda, Graner, Andreas, Komatsuda, Takao, Sreenivasulu, Nese, Schnurbusch, Thorsten

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OsASR5 enhances drought tolerance through a stomatal closure pathway associated with ABA and H2O2 signaling in rice by Li, Jinjie, Li, Yang, Yin, Zhigang, Jiang, Jihong, Zhang, Minghui, Guo, Xiao, Ye, Zhujia, Zhao, Yan, Xiong, Haiyan, Zhang, Zhanying, Shao, Yujie, Jiang, Conghui, Zhang, Hongliang, An, Gynheung, Paek, Nam-Chon, Ali, Jauhar, Li, Zichao

“…Further studies demonstrated that OsASR5 functioned as chaperone‐like protein and interacted with stress‐related HSP40 and 2OG‐Fe (II) oxygenase domain containing proteins in yeast and plants. …”
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Compensatory mechanisms of litter decomposition under alternating moisture regimes in tropical rice fields by Schmidt, Anja, John, Katharina, Auge, Harald, Brandl, Roland, Horgan, Finbarr G., Settele, Josef, Zaitsev, Andrey S., Wolters, Volkmar, Schädler, Martin

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SNP-Seek II: A resource for allele mining and analysis of big genomic data in Oryza sativa by Mansueto, Locedie, Fuentes, Roven Rommel, Chebotarov, Dmytro, Borja, Frances Nikki, Detras, Jeffrey, Abriol-Santos, Juan Miguel, Palis, Kevin, Poliakov, Alexandre, Dubchak, Inna, Solovyev, Victor, Hamilton, Ruaraidh Sackville, McNally, Kenneth L., Alexandrov, Nickolai, Mauleon, Ramil

“…Five reference genomes of rice representing the major variety groups were used: Nipponbare (temperate japonica), IR 64 (indica), 93–11 (indica), DJ 123 (aus), and Kasalath (aus). …”
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Generating a positive energy balance from using rice straw for anaerobic digestion by Nguyen, V.H., Topno, S., Balingbing, C., Nguyen, V.C.N., Röder, M., Quilty, J., Jamieson, C., Thornley, P., Gummert, M.

“…The net energy of the rice straw supply chain for biogas generation through AD is 3,500 MJ per ton of straw. This rice straw management option can provide a 70% net output energy benefit. …”
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A taxonomy-based approach to shed light on the babel of mathematical analogies for rice simulation by Confalonieri, Roberto, Bregaglio, Simone, Adam, Myriam, Ruget, Françoise, Li, Tao, Hasegawa, Toshihiro, Yin, Xinyou, Zhu, Yan, Boote, Kenneth, Buis, Samuel, Fumoto, Tamon, Gaydon, Donald, Lafarge, Tanguy, Marcaida, Manuel, Nakagawa, Hiroshi, Ruane, Alex C., Singh, Balwinder, Singh, Upendra, Tang, Liang, Tao, Fulu, Fugice, Job, Yoshida, Hiroe, Zhang, Zhao, Wilson, Lloyd T., Baker, Jeff, Yang, Yubin, Masutomi, Yuji, Wallach, Daniel, Acutis, Marco, Bouman, Bas

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Temperature explains the yield difference of double-season rice between tropical and subtropical environments by Wang, Depeng, Laza, Ma. Rebecca C., Cassman, Kenneth G., Huang, Jianliang, Nie, Lixiao, Ling, Xiaoxia, Centeno, Grace S., Cui, Kehui, Wang, Fei, Li, Yong, Peng, Shaobing

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Energy efficiency, greenhouse gas emissions, and cost of rice straw collection in the mekong river delta of Vietnam by Van Hung, Nguyen, Nguyen, Canh Duc, Tran, Tuan Van, Hau, Hoa Duc, Nguyen, Nghi Thanh, Gummert, Martin

“…This mechanized operation can reduce labor requirement by 90%. Specific weight of baled straw was from 73 to 104 kg per cubic meter, which is heavier by 50–100% than that of loose-form straw, at a moisture content of 12.4 (±1.21)% in wet basis. …”
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The empirical relationship between price and quality of rice at market level in West Java by Rachmat, Ridwan, Thahir, Ridwan, Gummert, Martin

“…The study showed that rice quality varied, most of them were long and slender kernels, chalkiness ranged between 10-20% (scale 5), and head rice around 69-84%. The amylose content was intermediate (20-21%), the gelatinization temperature was high-intermediate (70-74oC), and the gel consistency was soft (65-70). …”
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