Search Results - Protein evolution

Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals by Böhme, U., Otto, T.D., Cotton, J.A., Steinbiss, S., Sanders, M., Oyola, Samuel O., Nicot, A., Gandon, S., Patra, K.P., Herd, C., Bushell, E., Modrzynska, K.K., Billker, O., Vinetz, J.M., Rivero, A., Newbold, C.J., Berriman, M.

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The pgip family in soybean and three other legume species: evidence for a birth-and-death model of evolution by Kalunke, R.M., Cenci, A., Volpi, C., O'Sullivan, D.M., Sella, L., Favaron, F., Cervone, F., Lorenzo, G. de, D'Ovidio, R.

“…Polygalacturonase-inhibiting proteins (PGIPs) are leucine-rich repeat (LRR) plant cell wall glycoproteins involved in plant immunity. …”
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Experimental Virus Evolution Reveals a Role of Plant Microtubule Dynamics and TORTIFOLIA1/SPIRAL2 in RNA Trafficking by Pena, Eduardo Jose, Ferriol, Inmaculada, Sambade, Adrian, Buschmann, Henrik, Niehl, Annette, Elena, Santiago F., Rubio, Luis, Heinlein, Manfred

“…These observations demonstrate a role of dynamic MT rearrangements and of the MT-associated protein TORTIFOLIA1/SPIRAL2 in cellular functions related to virus spread and indicate that MT dynamics and MT-associated proteins represent constraints for virus evolution and adaptation. …”
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Evolution of Industrial Quality Parameters of Wheat during Storage in White and Colored Silo Bags: A Field-Scale Study by Bartosik, Ricardo Enrique, Cardoso, Marcelo Leandro, Carpaneto, Barbara Bettina, Astiz, Valentina, Molfese, Elena Rosa, De La Torre, Diego

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Disability-adjusted life years due to chronic and hidden hunger under food system evolution with climate change and adaptation to 2050 by Sulser, Timothy B., Beach, Robert H., Wiebe, Keith D., Dunston, Shahnila, Fukagawa, Naomi K.

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Comparative analysis of the chicken IFITM locus by targeted genome sequencing reveals evolution of the locus and positive selection in IFITM1 and IFITM3 by Bassano, I., Swee Hoe Ong, Sanz Hernandez, M., Vinkler, M., Kebede, A., Hanotte, Olivier H., Onuigbo, E., Fife, M., Kellam, P.

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Genomic analysis revealed a convergent evolution of LINE-1 in coat color: A case study in water buffaloes (Bubalus bubalis) by Liang, D., Zhao, P., Si, J., Fang, L., Pairo-Castineira, E., Hu, X., Xu, Q., Hou, Y., Gong, Y., Liang, Z., Tian, B., Mao, H., Yindee, M., Faruque, M.O., Kongvongxay, S., Khamphoumee, S., Liu, G.E., Wu, D.-D., Barker, J.S.F., Han Jianlin, Zhang, Y.

“…Visible pigmentation phenotypes can be used to explore the regulation of gene expression and the evolution of coat color patterns in animals. Here, we performed whole-genome and RNA sequencing and applied genome-wide association study, comparative population genomics and biological experiments to show that the 2,809-bp-long LINE-1 insertion in the ASIP (agouti signaling protein) gene is the causative mutation for the white coat phenotype in swamp buffalo (Bubalus bubalis). …”
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The Phylogeography of Potato Virus X Shows the Fingerprints of Its Human Vector by Fuentes, S., Gibbs, A.J., Hajizadeh, M., Pérez, A., Adams, I.P., Fribourg, C.E., Kreuze, Jan F., Fox, A., Boonham, N., Jones, R.A.C.

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The population of Fusarium oxysporum f. sp. cubense in Brazil is not structured by VCG or by geographic origin by Batista, Izabel, Heck, Daniel Winter, Santos, Alessandro, Alves, Gabriel, Ferro, Camila, Dita Rodriguez, Miguel Angel, Haddad, Fernando, Michereff, Sami Jorge, Correia, Kamila Câmara, Bruce da Silva, Christiana de Fátima, Mizubuti, Eduardo

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Effect of Protein Restriction During Mid-to Late Gestation of Beef Cows on Female Offspring Fertility, Lactation Performance and Calves Development by Lopez Valiente, Sebastian, Maresca, Sebastian, Rodriguez, Alejandro Martin, Long, Nathan M., Quintans, Graciela I., Palladino, Rafael Alejandro

“…The present work investigated the effects of two levels of crude protein (CP) provided to mature dams during late gestation on subsequent heifer’s growth postweaning, reproductive performance, milk production and grand offspring evolution. …”
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Equine influenza virus in Asia: phylogeographic pattern and molecular features reveal circulation of an autochthonous lineage by Miño, Samuel, Mojsiejczuk, Laura, Guo, Wei, Zhang, Haili, Qi, Ting, Du, Cheng, Zhang, Xiang, Wang, Jingfei, Campos, Rodolfo, Wang, Xiaojun

“…Characteristic aminoacidic signature patterns were detected in all viral proteins in both Asian-FC1 and FC2 populations. Several changes were located at the top of the HA1 protein, inside or near antigenic sites. …”
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Genetic variation and diversity for grain iron, zinc, protein and agronomic traits in advanced breeding lines of pearl millet [Pennisetum glaucum (L.) R. Br.] for biofortification... by Pujar, Mahesh, Govindaraj, Mahalingam, Gangaprasad, S., Kanatti, A., Shivade, H.

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Expression profile of transcripts encoding cell wall remodelling proteins in tomato fruit cv. Micro-Tom subjected to 15°C storage by Müller, Gabriela L., Budde, Claudio Olaf, Lauxmann, Martín Alexander, Triassi, Agustina, Andreo, Carlos Santiago, Drincovich, María Fabiana, Lara, María Valeria

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Molecular evolution of a central region containing B cell epitopes in the gene encoding the p67 sporozoite antigen within a field population of Theileria parva by Obara, Isaiah, Ulrike, S., Musoke, A.J., Spooner, P.R., Jabbar, A., Odongo, D., Kemp, Stephen J., Silva, Joana C., Bishop, Richard P.

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Prediction of aquaporin function by integrating evolutionary and functional analyses by Perez Di Giorgio, Juliana Andrea, Soto, Gabriela Cinthia, Alleva, Karina Edith, Jozefkowicz, Cintia, Amodeo, Gabriela, Muschietti, Jorge Prometeo, Ayub, Nicolás Daniel

“…Aquaporins (AQPs) are a family of channel proteins, which transport water and/or small solutes across cell membranes. …”
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Animal-source foods: Their role in sustainable healthy diets by Leroy, Jef L., Alonso, Silvia

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The ammonium channel NOD26 is the evolutionary innovation that drives the emergence, consolidation, and dissemination of nitrogen-fixing symbiosis in angiosperms by Frare, Romina Alejandra, Ayub, Nicolás Daniel, Alleva, Karina Edith, Soto, Gabriela Cinthia

“…Increasing evidence indicates that N-fixing symbiosis has evolved several times in the N-fixing clade of angiosperms and that this evolution is driven by a single evolutionary innovation. …”
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GreenPhylDB: A gene family database for plant functional genomics by Conte, M.G., Laporte, Marie-Angélique, Perin, C., Rouard, M.

“…With the increasing number of genomes being sequenced, a major objective is to transfer accurate annotation from characterised proteins to uncharacterised sequences. Consequently, comparative genomics has become a usual and efficient strategy in functional genomics. …”
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How Many Faces Does the Plant U-Box E3 Ligase Have? by Xinguo Mao, Chunmei Yu, Long Li, Min Wang, Lili Yang, Yining Zhang, Yanfei Zhang, Jingyi Wang, Chaonan Li, Reynolds, Matthew P., Ruilian Jing

“…Ubiquitination is a major type of post-translational modification of proteins in eukaryotes. The plant U-Box (PUB) E3 ligase is the smallest family in the E3 ligase superfamily, but plays a variety of essential roles in plant growth, development and response to diverse environmental stresses. …”
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Analysis of gene content in sweet potato chlorotic stunt virus RNA1 reveals the presence of the p22 RNA silencing suppressor in only a few isolates: Implications for viral evolutio... by Cuéllar, Wilmer Jose, Tairo, F., Kreuze, Jan F., Valkonen, J.P.T.

“…The data from this study demonstrate that isolates of this virus species can vary in the genes encoding RNA silencing suppressor proteins. This study also provides the first example of intraspecific variability in gene content of the family Closteroviridae and may be a new example of the recombination-mediated gene gain that is characteristic of virus evolution in this virus family.…”
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