Search Results - "ontology"

Planteome: A resource for common reference ontologies and applications for plant biology by Jaiswal, P., Cooper, Laurel D., Elser, J.L., Meier, A., Laporte, Marie-Angélique, Mungall, C., Smith, B., Johnson, E.K.S., Seymour, M., Preece, J., Xu, X., Kitchen, R.S., Qu, B., Zhang, E., Arnaud, Elizabeth, Carbon, S., Todorovic, S., Stevenson, D.W.

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The Crop Ontology: a source of standard traits and variables for breeding and agronomy by Arnaud, Elizabeth, Valette, L., Pietragalla, J., Laporte, Marie-Angélique, Aubert, C., Devare, Medha, McLaren, G., Ribaut, J.M.

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AgroPortal: a proposition for ontology-based services in the agronomic domain by Jonquet, C., Dzale-Yeumo, E., Arnaud, Elizabeth, Larmande, Pierre, Toulet, A., Laporte, Marie-Angélique

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AgroPortal: a proposition for ontology-based services in the agronomic domain by Jonquet, C., Dzale-Yeumo, E., Arnaud, Elizabeth, Larmande, Pierre, Toulet, A., Laporte, Marie-Angélique

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The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics by Cooper, Laurel D., Meier, A., Laporte, Marie-Angélique, Elser, J.L., Mungall, C., Sinn, B.T., Cavaliere, D., Carbon, S., Dunn, N.A., Smith, B., Qu, B., Preece, J., Zhang, E., Todorovic, S., Gkouto, G., Doonan, J.H., Stevenson, D.W., Arnaud, Elizabeth, Jaiswal, P.

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The ontologies community of practice: a CGIAR initiative for Big Data in agrifood systems by Arnaud, Elizabeth, Laporte, Marie-Angélique, Kim, Soonho, Aubert, Céline, Leonelli, Sabina, Miro, Berta, Cooper, Laurel D., Jaiswal, Pankaj, Kruseman, Gideon K., Shrestha, Rosemary, Buttigieg, Pier Luigi, Mungall, Christopher J., Pietragalla, Julian, Agbona, Afolabi, Muliro, Jacqueline, Detras, Jeffrey, Hualla, Vilma, Rathore, Abhishek, Das, Roma Rani, Dieng, Ibnou, Bauchet, Guillaume J., Menda, Naama, Pommier, Cyril, Shaw, Felix, Lyon, David, Mwanzia, Leroy, Juarez, Henry, Bonaiuti, Enrico, Chiputwa, Brian, Obileye, Olatunbosun, Auzoux, Sandrine, Yeumo, Esther Dzalé, Mueller, Lukas A., Silverstein, Kevin, Lafargue, Alexandra, Antezana, Erick, Devare, Medha, King, Brian

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CGIAR Expert Finder: an ontology-based web tool for scouting expertise and partners by CGIAR Platform for Big Data in Agriculture

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Small-Scale Fisheries and Aquaculture Ontology (SSFO): Labeling fish science data by Arnaud, Elizabeth, Laporte, Marie-Angélique, Delamare-Deboutteville, Jerome, Tilley, Alexander

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Planteome/CO_345-brachiaria-traits: CO_345-brachiaria-traits ontology by Hernandez Mahecha, Luis Miguel, Castiblanco Vargas, Eveline Valheria, Worthington, Margaret Leigh, Valette, Leo, Laporte, Marie-angelique

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Planteome/CO_359-sunflower-traits: CO_359-sunflower-traits Ontology by Stanton, Evan, Laporte, Marie-angelique

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Planteome/CO_340-cowpea-traits: CO_340-cowpea-traits ontology by Agbaje, Tunde, Ofodile, Sam, Valette, Leo, Laporte, Marie-Angelique, Hazekamp, Thomas, Silamana, Barry, Compaore, Eveline, Tengey, Theophilus, Lawan Umar, Muhammad, Diallo, Sory, De Souza, Kaue, Manners, Rhys Evan Joseph, Arnaud, Elisabeth, Van Etten, Jacob, Ehlers, Jeff D, Ousmane, Boukar

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Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report by Matentzoglu, N., Balhoff, J., Bello, S., Boerkoel, C., Bradford, Y., Carmody, L., Cooper, Laurel D., Grove, C., Harris, N., Köhler, S., Laporte, Marie-Angélique, Laulederkind, S., Lee, R., Mazandu, G., McMurry, J., Mungall, C., Osumi-Sutherland, D., Pilgrim, C., Rageth, K., Robb, S., Robinson, P., Segerdell, E., Thessen, A., Vasilevsky, N., Zhang, X., Haendel, M.

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Reusing the NCBO BioPortal technology for agronomy to build AgroPortal by Jonquet, C., Toulet, A., Arnaud, Elizabeth, Aubin, S., Dzale-Yeumo, E., Emonet, V., Graybeal, J., Musen, M.A., Pommier, C., Larmande, Pierre

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Guidelines for creating crop-specific ontologies to annotate phenotypic data: version 2.2 by Pietragalla, Julian, Valette, Léo, Shrestha, Rosemary, Laporte, Marie-Angélique, Hazekamp, Tom, Arnaud, Elizabeth

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Planteome/CO_370-apple-traits: Apple Trait Ontology v1.0 by Chuprikova, Ekaterina, Guerra, Walter, Laporte, Marie-angelique, Arnaud, Elisabeth, Humann, Jodi

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GreenPhylDB: phylogenomic resources for comparative and functional genomics in plants by Rouard, M., Guignon, Valentin, Walde, C., Droc, Gaëtan, Zmasek, C., Dufayard, Jean-François, Conte, M.G.

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A Natural Language Processing Pipeline to extract phenotypic data from formal taxonomic descriptions with a focus on flagellate plants by Endara L., Burleigh G., Cooper L., Jaiswal, P., Laporte, Marie-Angélique

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Data management in multi-disciplinary African RTB crop breeding programs by Agbona, A ., Peteti, P., Teeken, Béla, Olaosebikan, O., Bello, A.A., Parkes, Elizabeth Y., Rabbi, I.Y., Mueller, L., Egesi, Chiedozie N., Kulakow, Peter A.

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Bridging the phenotypic and genetic data useful for integrated breeding through a data annotation using the Crop Ontology developed by the crop communities of practice by Shrestha, R., Matteis, L., Skofic, M., Portugal, A., McLaren, G., Hyman, Glenn G., Arnaud, Elizabeth

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Chado Controller: advanced annotation management with a community annotation system by Guignon, Valentin, Droc, Gaëtan, Alaux, M., Baurens, F.C., Garsmeur, O., Poiron, C., Carver, T., Rouard, M., Bocs, S.

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