Resultados de búsqueda - "evolutionary"

Analysis of Virome by High-Throughput Sequencing Revealed Multiple Infection and Intra-Virus Diversity in a Single Grapevine Plant por Glasa, Miroslav, Predajna, Lukas, Sihelská, Nina, Soltys, Katarína, Ruiz-García, Ana B.

“…In case of GRSPaV, two variants representing different evolutionary lineages have been identified in the plant. …”
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TRY – a global database of plant traits por Kattge, J., Días, S., Lavorel, S., Prentice, I.C., Leadley, P., Bonisch, G, Garnier, E., Westoby, M., Reich, P.B., Wright, I.J., 125 autores más.

“…Trait data thus represent the raw material for a wide range of research from evolutionary biology, community and functional ecology to biogeography. …”
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Characterisation of virus isolates associated with leaf yellowing in Swedish sugar-beet plants por Uddin, Mohammad Nasir

“…Phylogenetic analyses with different evolutionary best-fit models showed that both of the isolates are very closely related to the British isolate BMYV-Broom’s Barn. …”
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Trygg inne eller fri ute? por Nygårds, Nanette

“…The domestic cat (Felis silvestris catus) has developed into a social, but also independent animal, with behavioral needs linked to its evolutionary adaptations. The cat has traditionally lived outdoors, and as such has had free access to natural enrichment. …”
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Sequence characterization of Barley yellow dwarf virus – OYV por Sathees, Kanitha

“…Even if isolates of BYD-associated viruses from different parts of the world show significant divergence in pathogenicity and genetic structure, the evolutionary process and the genomic structure of new viral species are poorly known. …”
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Genetic variation in seedling water-use efficiency of Patagonian Cypress populations from contrasting precipitation regimes assessed through carbon isotope discrimination por Pastorino, Mario Juan, Aparicio, Alejandro Gabriel, Marchelli, Paula, Gallo, Leonardo Ariel

“…Water-use efficiency (WUE) is a physiological parameter that plays a significant role in the evolutionary dynamics of many forest tree species. It can be estimated indirectly through carbon isotope discrimination (Δ). …”
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Phylodynamic of Tomato Brown Rugose Fruit Virus and Tomato Chlorosis Virus, Two Emergent Viruses in Mixed Infections in Argentina por Ibanez, Julia Magali, Zambrana Montaño, Romina Micaela, Gonzalez Carreras, Pamela Stefanía, Obregon, Veronica Gabriela, Irazoqui, Jose Matias, Vera, Pablo Alfredo, Lattar, Tatiana Elisabet, Blanco Fernandez, María D., Puebla, Andrea Fabiana, Amadio, Ariel, Torres, Carolina, Lopez Lambertini, Paola Maria

“…This study aimed to reconstruct the complete genomes of ToBRFV and ToCV from infected tomato plants and wastewater samples in Argentina to explore their global evolutionary dynamics. Additionally, it compared the genetic diversity of ToBRFV in plant tissue and sewage samples. …”
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Population genomics of the widespread African savannah trees Afzelia africana and Afzelia quanzensis reveals no significant past fragmentation of their distribution ranges por Donkpegan, A.S.L., Piñeiro, R., Heuertz, M., Duminil, J., Daïnou, K., Doucet, J.-L., Hardy, Olivier J.

“…Few studies have addressed the evolutionary history of tree species from African savannahs. …”
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The COVID-19 Pandemic Endangers Africa’s Indigenous Pygmy Populations por Fa, J.E., Nasi, R., Funk, S.M.

“…The demographic and evolutionary split between Pygmy and non-Pygmy populations is amongst the oldest for modern humans with the divergence estimated from genetic data to be roughly between 60,000 and over 100,000 years ago and the split between Western and Eastern Pygmy groups about 20,000 years ago (Hsieh et al. 2016). …”
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Using multiplex amplicon PCR technology to efficiently and timely generate Rift Valley fever virus sequence data for genomic surveillance por Juma, John, Konongoi, Samson L., Nsengimana, I., Mwangi, Reuben, Akoko, James M., Nyamota, Richard, Muli, Collins, Dobi, Paul O., Kiritu, Edward, Osiany, Shebbar, Onwong’a, A.A., Gachogo, R.W., Sang, R., Christoffels, A., Roesel, Kristina, Bett, Bernard K., Oyola, Samuel O.

“…Pathogen genomic sequencing is becoming a routine procedure and a powerful tool for understanding the evolutionary dynamics of infectious organisms, including viruses. …”
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Building a feral future: Open questions in crop ferality por Mabry, Makenzie E., Bagavathiannan, Muthukumar V., Bullock, James M., Wang, Hongru, Caicedo, Ana L., Dabney, Clemon J., Drummond, Emily B.M., Frawley, Emma, Gressel, Jonathan, Husband, Brian C., Lawton-Rauh, Amy, Maggioni, Lorenzo, Olsen, Kenneth M., Pandolfo, Claudio, Pires, J. Chris, Pisias, Michael T., Razifard, Hamid, Soltis, Douglas E., Soltis, Pamela S., Tillería, Sofía, Ureta, Soledad, Warschefsky, Emily, McAlvay, Alex C.

“…These questions, which emerged from the colloquium “Darwins' reversals: What we now know about Feralization and Crop Wild Relatives” at the BOTANY 2021 conference, fall into seven categories that span both basic and applied research: (1) definitions and drivers of ferality, (2) genetic architecture and pathway, (3) evolutionary history and biogeography, (4) agronomy and breeding, (5) fundamental and applied ecology, (6) collecting and conservation, and (7) taxonomy and best practices. …”
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Target capture sequencing for the first Nigerian genotype I ASFV genome por Adeola, A.C., Luka, P.D., Xiang-Xiang Jiang, Zheng-Fei Cai, Oluwole, O.O., Xian Shi, Oladele, B.M., Olorungbounmi, T.O., Boladuro, B., Omotosho, O., Okoro, V.M.O., Dawuda, P.M., Olaogun, S.C., Sanke, O.J., Hai-Bing Xie, Bishop, Richard P., Jianlin Han, Jianbo Li, Ya-Ping Zhang, Min-Sheng Peng

“…The study reports for the first time the determination of near-complete genomes of ASFV using in-solution hybrid capture sequencing, which represents an important advance in understanding the global evolutionary landscape of ASFVs.…”
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Dominant clade-featured SARS-CoV-2 co-occurring mutations reveals plausible epistasis: An in silico based hypothetical model por Ul Alam, Rubayet A. S. M., Islam, Ovinu Kibria, Hasan, Md. Shazid, Islam, Mir Raihanul, Mahmud, Shafi, Al-Emran, Hassan M., Jahid, Iqbal Kabir, Crandall, Keith A., Hossain, M. Anwar

“…GV-clade viruses seemingly gained the evolutionary advantage of the confounding factors; nevertheless, N:p.A220V might modulate RNA binding with no phenotypic effect. …”
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Continent-wide genomic analysis of the African buffalo (Syncerus caffer) por Talenti, A., Wilkinson, T., Cook, Elizabeth A.J., Hemmink, Johanneke D., Paxton, E., Mutinda, M., Ngulu, S.D., Jayaraman, S., Bishop, Richard P., Obara, I., Hourlier, T., Giron, C.G., Martin, F.J., Labuschagne, M., Atimnedi, P., Nanteza, A., Keyyu, J.D., Mramba, F., Caron, A., Cornelis, D., Chardonnet, P., Fyumagwa, R., Lembo, T., Auty, H.K., Michaux, J., Smitz, N., Toye, Philip G., Robert, C., Prendergast, J.G.D., Morrison, L.J.

“…Genomic analysis can provide insights into the evolutionary history of the species, and the key selective pressures shaping populations, including assessment of population level differentiation, population fragmentation, and population genetic structure. …”
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Genome characterization of Rift Valley fever virus isolated from cattle, goats and sheep during interepidemic periods in Kenya por Onwong'a, A.A., Oyola, Samuel O., Juma, John, Konongoi, S., Nyamota, Richard, Mwangi, Reuben, Muli, Collins, Dobi, Paul, Bett, Bernard K., Ongus, J.R.

“…RVFV genomes are thought to undergo both recombination and reassortment and investigations of these events is important for monitoring the emergence of virulent strains and understanding the evolutionary characteristics of this virus. The aim of this study was to characterize the genomes of RVFV isolates from cattle, sheep, and goats collected during an interepidemic period in Kenya between June 2016 and November 2021. …”
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Musa species in mainland Southeast Asia: From wild to domesticate por Christophe, Jenny, Gabriel, Sachter-Smith, Breton, Catherine, Ronan, Rivallan, Jean-Pierre, Jacquemoud-Collet, Cécile, Dubois, Matthieu, Chabannes, Ngoc-Sam, Ly, Thomas, Haevermans, Tien-Dung, Trieu, Oudomphone, Insisiengmay, Tin, Zhang, Marie-Line, Caruana, Sardos, Julie, Xavier, Perrier

“…These various stages, from simple opportunistic gathering to true domestication, shed light on the evolutionary history of today’s cultivated varieties.…”
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A quantitative computational framework for allopolyploid single-cell data integration and core gene ranking in development por Meiyue Wang, Zijuan Li, Haoyu Wang, Junwei Zhao, Yuyun Zhang, Kande Lin, Shusong Zheng, Yilong Feng, Yu'e Zhang, Wan Teng, Yiping Tong, Wenli Zhang, Yongbiao Xue, Hude Mao, Hao Li, Bo Zhang, Awais Rasheed, Bhavani, Sridhar, Chenghong Liu, Hong-Qing Ling, Yue-Qing Hu, Yijing Zhang

“…How the merger of different genomes contributes to polyploid development is a fundamental issue in evolutionary developmental biology and breeding research. …”
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Phylogenetic analysis of endogenous viral elements in the rice genome reveals local chromosomal evolution in Oryza AA-genome species por Saito, Nozomi, Chen, Sunlu, Kitajima, Katsuya, Zhou, Zhitong, Koide, Yohei, Encabo, Jaymee R., Diaz, Maria Genaleen Q., Choi, Il-Ryong, Koyanagi, Kanako O., Kishima, Yuji

“…The eRTBVL-D sequences were inserted into the genomes just before speciation of the AA-genome species.Results and discussionTen eRTBVL-D segments are located at six loci, which were used for our evolutionary analyses during the speciation of the AA-genome species. …”
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Developing pangenomes for large and complex plant genomes and their representation formats por Ruperao, P., Rangan, P., Shah, T., Sharma, V., Rathore, A., Mayes, S., Pandey, M.K.

“…It also discusses representation formats suitable for downstream analyses, offering valuable insights into the genetic landscape and evolutionary dynamics of plant species. In summary, this review underscores the significance of pan-genome construction and representation formats in resolving the genetic architecture of plants, particularly those with complex genomes. …”
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Comparative genomics reveals common diversity and adaptation to harsh environments in the Arabian Peninsula indigenous chickens por Assiri, A., Vallejo-Trujillo, A., Al-Abri, M., Bahbahani, H., Almathen, F., Ahbara, A., Al Marzooqi, W., Tijjani, A., Lawal, R., Hanotte, Olivier H.

“…Identifying genomic regions under selection is crucial for comprehending the evolutionary history of the domestic chicken. Arabian Peninsula (AP) indigenous chickens are mostly found outdoors, being reared alongside other livestock for production purposes. …”
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