Search Results - "Phylogenetics"

First report of banana bunchy top virus in banana (Musa spp.) and its eradication in Togo by Kolombia, Y.A., Oviasuyi, T., Dzola, A., Gonh-Goh, A., Atsu, T., Oresanya, A., Ogunsanya, P., Alabi, T., Kumar, P. Lava

“…Further analysis of the 240-bp nucleotide sequence with Maximum-likelihood phylogenetic analysis using MEGA-X software has grouped the BBTV isolate with sub-Saharan African sub-clade of the South Pacific group. …”
Get full text

Poster #27 - One Health surveillance for influenza A viruses in Vietnamese live bird markets from January 2019 to April 2021 by Tung D. Dao, Coleman, K.K., Vuong N. Bui, Anh N. Bui, Long H. Tran, Quy D. Nguyen, Son T. Than, Pulscher, L.A., Marushchak, L.V., Robie, E.R., Hung Nguyen-Viet, Phuc Pham-Duc, Christy, N.C., Brooks, J.S., Huy C. Nguyen, Rubrum, A., Webby, R.J., Gray, G.C.

“…Of the human samples tested, one sample returned good Sanger sequence results for the PB1 gene. Phylogenetic analysis of this sample showed clustering with PB1 genes from H9N2 viruses isolated from chickens and ducks in Vietnam. …”
Get full text

Molecular evidence that cellulolytic bacterial genus Cohnella is widespread among Neotropical Nasutitermitinae from NE Argentina = Evidencia molecular de la ocurrencia de bacterias... by Arneodo Larochette, Joel Demian, Etcheverry, Clara, Thebe, Tumelo, Babalola, Olubukola Oluranti, Godoy, María Celina, Talia, Paola Mónica

Get full text
Get full text
Get full text

Trädsvampborrare i ettåriga tickor : betydelsen av värdsvamparnas släktskap och miljövariabler by Lundell, Sofia

Argentine Metarhizium spp. isolates: Molecular identification, blastospores production, and its pathogenicity against Blattella germanica adults by Lozano, Francisco, Manfrino, Romina Guadalupe, Leclerque, Andreas, Schuster, Christina, Rivas-Franco, Federico, Gutierrez, Alejandra Concepción

“…Species-discriminating diagnostic PCR and phylogenetic reconstruction was successful in assigning ten of the strains to different species within the Metarhizium PARB clade: four strains to Metarhizium brunneum and three strains each to Metarhizium hybridum and Metarhizium robertsii. …”
Get full text
Get full text
Get full text

A new argasid tick species (Acari: Argasidae) associated with the rock cavy, Kerodon rupestris Wied-Neuwied (Rodentia: Caviidae), in a semiarid region of Brazil by Labruna, Marcelo B., Nava, Santiago, Marcili, Arlei, Barbieri, Amália Regina Mar, Nunes, Pablo Henrique, Horta, Mauricio Claudio, Venzal, José Manuel

“…DNA sequences of the mitochondrial 16S rRNA gene were generated from nymphal ticks and used to conduct phylogenetic analyses along with other Ornithodoros spp. …”
Get full text
Get full text
Get full text

The Amblyomma maculatum Koch, 1844 (Acari: Ixodidae) group of ticks: phenotypic plasticity or incipient speciation? by Lado, Paula, Nava, Santiago, Mendoza-Uribe, Leonardo, Caceres, Abraham G., Delgado de la Mora, Jesus, Licona Enriquez, Jesus D., Delgado de la Mora, David, Labruna, Marcelo B., Durden, Lance A., Allerdice, Michelle E.J., Paddock, Christopher D., Szabó, Matias P.J., Venzal, José Manuel, Guglielmone, Alberto, Beati, Lorenza

“…Background; The goal of this study was to reassess the taxonomic status of A. maculatum, A. triste and A. tigrinum by phylogenetic analysis of five molecular markers [four mitochondrial: 12S rDNA, 16S rDNA, the control region (DL) and cytochrome c oxidase 1 (cox1), and one nuclear: ribosomal intergenic transcribed spacer 2 (ITS2)]. …”
Get full text
Get full text
Get full text

Genetiska studier på fågelinfluensa by Ehrenberg, Maria

“…The nucleotide sequences were translated to amino acids and analyzed phylogenetically and the amino acids were compared to public sequences downloaded from National Center for Biotechnology Information (NCBI). …”

Genus-targeted markers for the taxonomic identification and monitoring of coagulase-positive and coagulase-negative Staphylococcus species by Jimenez Velasquez, Sabrina Del Carmen, Pacheco Montealegre, M.E, Torres Higuera, Ligia Denise, Uribe Gutierrez, Liz Alejandra, Burbano David, Diana Marcela, Davila Mora, Lizeth Lorena, Renjifo Ibáñez, Maria Camila, Quintero A., Caro

Get full text
Get full text
Get full text

Bio-ecology and systematics of the scale insect Stictococcus vayssierei Richard, 1971 (Hemiptera: Stictococcidae), a major pest of root and tuber crops in the Nigero-Congolian fore... by Doumtsop, F.A.R.

“…Morphological characters and phylogenetic trees based on DNA sequences of two loci (28S, COI-COII) supported the hypothesis that ARTS is a complex of two cryptic species with 2.5% and 9.3% mean between-clade genetic divergence. …”
Get full text

Persistence and genetic vulnerability of tropical tree species in response to anthropogenic disturbances by Kanchanarak, Tania

“…Through a meta-analysis using phylogenetic linear mixed models, I found that genetic diversity of adult populations was significantly lower in fragmented and in forests with combined disturbances, while juvenile populations were generally unaffected. …”
Get full text

Determining the origin of invasions and demonstrating a lack of enemy release from microsporidian pathogens in the common wasps (Vespula vulgaris) by Lester, Philip J., Gruber, Mónica A.M., Brenton-Rule, Evan C., Archer, Michael, Corley, Juan Carlos, Dvorak, Libor, Masciocchi, Maite, Van Oystaeyen, Annette

Get full text
Get full text

Genetic features of human and bovine Escherichia coli O157: H7 strains isolated in Argentina by Masana, Marcelo Oscar, Pianciola, Luis, D’Astek, Beatriz A., Mazzeo, Melina Leonor, Chinen, Isabel, Rivas, Marta

“…Single nucleotide polymorphism (SNP) analysis has revealed the existence of nine clade phylogenetic groups. In our clinical strains collection, 87.6% belonged to the hypervirulent clade 8, and 12.4% were classified as clade 4/5. …”
Get full text
Get full text
Get full text

Caracterización taxonómica y análisis de la variabilidad del agente causal del cancro del tallo de la soja en Buenos Aires (2005/2007) by Grijalba, Pablo Enrique, Ridao, Azucena del Carmen, Guillin, Eduardo Alejandro

Get full text

Identification and characterization of a Babesia bigemina thrombospondin-related superfamily member, TRAP-1 : a novel antigen containing neutralizing epitopes involved in merozoite... by Montenegro, Valeria Noely, Paoletta, Martina, Jaramillo Ortiz, Jose, Suarez, Carlos Esteban, Wilkowsky, Silvina Elizabeth

“…Structural modeling and phylogenetic analysis were performed with the identified TRAP proteins. …”
Get full text
Get full text
Get full text

Functional and molecular diversity of rice straw decomposing bacteria and fungi by Do Thi, Xuan

“…Functional traits were found in phylogenetically diverse families. Cellulolytic activity was found in the Bacilliaceae, Enterobacteriaceae, Flexibacteraceae, Microbacteriaceae and the Paenibacillaceae. …”
Get full text

CRISPR/Cas9-mediated editing of DMR6 orthologue in banana (Musa spp.) confers enhanced resistance to bacterial disease by Tripathi, J., Ntui, V.O., Shah, T., Tripathi, L.

“…LT conceived the idea; JNT generated mutants and performed disease resistance evaluations; VON designed gRNAs, made construct and performed molecular analysis; TS performed phylogenetic analysis; all authors wrote the manuscript.…”
Get full text

Rhipicephalus sanguineus (Latreille, 1806): Neotype designation, morphological re-description of all parasitic stages and molecular characterization by Nava, Santiago, Beati, Lorenza, Venzal, José Manuel, Labruna, Marcelo B., Szabó, Matías P.J., Petney, Trevor, Saracho Bottero, Maria Noelia, Tarragona, Evelina Luisa, Dantas-Torres, Filipe, Silva, Maria M. Santos, Mangold, Atilio Jose, Guglielmone, Alberto, Estrada-Peña, Agustín

“…The larva is characterized by basis capituli broader than long with lateral angles short and slightly curved and with posterior margin slightly convex, cervical grooves short, shallow and subparallel, and scutum almost twice broader than long. The phylogenetic analysis of DNA sequences support R. sanguineus s.s. as a well-defined taxon when compared with other species of the R. sanguineus group: R. turanicus s.s., R. camicasi, R. guilhoni, R. sulcatus, R. pusillus, R. rossicus and R. leporis. …”
Get full text
Get full text
Get full text

The first complete genome sequence of the African swine fever virus genotype X and serogroup 7 isolated in domestic pigs from the Democratic Republic of Congo by Bisimwa, P.N., Ongus, J.R., Steinaa, Lucilla, Bisimwa, E.B., Bochere, Edwina, Machuka, Eunice M., Domelevo Entfellner, Jean-Baka, Okoth, Edward A., Pelle, Roger

“…The Uvira B53genome had a GC content of 38.5%, encoded 168 open reading frames (ORFs) and had 98.8% nucleotide identity with the reference ASFV genotype X Kenya 1950. The phylogenetic relationship with selected representative genomes clustered the Uvira B53 strain together with ASFV genotype X reported to date (Kenya 1950 and Ken05/Tk1). …”
Get full text

First Report of Target Spot of Soybean Caused by Corynespora cassiicola in the Colombian Eastern Plains by Lopez Cardona, Nathali, Guevara Castro, Yudy Alejandra, Gañan, Lederson

“…Results from an NCBI-BLASTn search revealed that the ITS sequences (GenBank accessions MN298749 and MN298751) were 100% identical to those of C. cassiicola in GenBank (accessions MN945374 and AB873045). A phylogenetic analysis, using the maximum likelihood method, based on ITS sequences from voucher specimens of Corynespora spp. available at GenBank, revealed that the two isolates were placed in the same clade as C.…”
Get full text
Get full text
Get full text