Search Results - "Phylogenetics"

Evolution in African tropical trees displaying ploidy-habitat association: the genus Afzelia by Donkpegan, A.S.L., Doucet, J.L., Migliore, J., Duminil, J., Dainou, K., Piñeiro, R., Wieringa, J.J., Champluvier, D., Hardy, Olivier J.

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Gene pools in wild Lima bean (Phaseolus lunatus L.) from the Americas: evidences for an Andean origin and past migrations by Serrano Serrano, Martha L., Hernández Torres, Jorge, Castillo Villamizar, Genis, Debouck, Daniel G., Chacón Sánchez, María I.

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Analysis of mitochondrial D-loop region casts new light on domestic water buffalo (Bubalus bubalis) phylogeny by Kierstein, G., Vallinoto, M., Silva, A., Schneider, M.P., Iannuzzi, L., Brenig, B.

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Mitochondrial DNA reveals multiple introductions of domestic chicken in East Africa by Mwacharo, Joram M., Bjornstad, G., Mobegi, V.A., Nomura, K., Hanada, H., Amano, T., Hanotte, Olivier H., Han Jianlin

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PCR-based identification of Fusarium spp. and impact of wound healing time on dry rot infection by Assefa Jima, Thomas

“…Quick and reliable identification of dry rot pathogens is important in the diagnosis, phylogenetics and suggesting the right management practices and storage possibilities for processors and growers. …”

Mitochondrial and nuclear multilocus phylogeny of Rhipicephalus ticks from Kenya by Kanduma, Esther G., Bishop, Richard P., Githaka, Naftaly W., Skilton, Robert A., Heyne, H., Mwacharo, J.M.

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Towards a more holistic research approach to plant conservation: the case of rare plants on oceanic islands by Silva, L., Furtado Dias, E., Sardos, J., Brito de Azevedo, E., Schafer, H., Moura, M.

“…A more comprehensive approach to research is proposed, encompassing: phylogenetics/systematics, pollination biology and seed dispersal, propagation, population genetics, species distribution models (SDMs), threats and monitoring. …”
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Diversity of aflatoxinproducing fungi and their impact on food safety in subSaharan Africa by Probst, C., Bandyopadhyay, Ranajit, Cotty, P.J.

“…Phylogenetics resolved S strain isolates producingonly B aflatoxins into two lineages fully supported by sizes of deletions in the gene region spanning the aflatoxinbiosynthesis genes cypA (aflU) and norB (aflF). …”
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Global foot-and-mouth disease research update and gap analysis: 7 – Pathogenesis and molecular biology by Robinson, L., Knight-Jones, Theodore J.D., Charleston, B., Rodríguez, L.L., Gay, C.G., Sumption, Keith J., Vosloo, W.

“…We have an expanding knowledge of viral and host molecular determinates of virulence and infectiousness, and of how phylogenetics may be used to estimate vaccine match and strain distribution. …”
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Global foot-and-mouth disease research update and gap analysis: 1 – Overview of global status and research needs by Knight-Jones, Theodore J.D., Robinson, L., Charleston, B., Rodríguez, L.L., Gay, C.G., Sumption, Keith J., Vosloo, W.

“…Developments in molecular biology and phylogenetics underlie many of the recent advances in FMD research, including improved vaccines and diagnostics, and improved understanding of FMD epidemiology. …”
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The Gene Pool Concept Applied to Crop Wild Relatives: An Evolutionary Perspective by Miller, Richard E., Khoury, Colin K.

“…However, the task of experimentally assessing all potential CWR proved too vast; therefore, proxies based on phylogenetic and other advanced scientific information have been explored. …”
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Morphometrics of Daucus (Apiaceae): A counterpart to a phylogenomic study by Arbizu Berrocal, Carlos Irvin, Reitsma, Kathleen R., Simon, Philipp W., Spooner, David M.

“…•Premise of study: Molecular phylogenetics of genome‐scale data sets (phylogenomics) often produces phylogenetic trees with unprecedented resolution. …”
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The complete chloroplast genome of a centennial olive tree (Olea europaea, Oleaceae) from the southern Peruvian coast by Saldaña, Carla L., Chura Llanos, Luz S., Estrada Cañari, Richard, Fernandez Huaytalla, Elizabeth, Zirena Vilca, Franz, Guerrero Abad, Juan Carlos, Amasifuen Guerra, Carlos Alberto, Gutierrez Reynoso, Dina Lida, Injante Silva, Pedro Hugo, Arbizu, Carlos I

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Molecular evidence of hybrid zones of cedrela (Meliaceae) in the yungas of northwestern Argentina by Zelener, Noga, Fornes, Luis Fernando, Inza, Maria Virginia, Tosto, Daniela Sandra, Soldati, Maria Cristina, Oliveira, Luiz Orlando de

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Seed banks as incidental fungi banks: Fungal endophyte diversity in stored seeds of banana wild relatives by Hill, Rowena, Llewellyn, Theo, Downes, Elizabeth, Oddy, Joseph, MacIntosh, Catrona, Kallow, Simon, Panis, Bartholomeus, Dickie, John B., Gaya, Ester

“…Using banana CWRs in the genus Musa as a case-study, we sequenced an extended ITS-LSU fragment in order to delimit operational taxonomic units (OTUs) and used a similarity and phylogenetics approach for classification. Fungi were successfully detected inside just under one third of the seeds, with a few genera accounting for most of the OTUs–primarily Lasiodiplodia, Fusarium, and Aspergillus–while a large variety of rare OTUs from across the Ascomycota were isolated only once. …”
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Halfway encounters: Meeting points of colonization routes among the southern beeches Nothofagus pumilio and N. antarctica by Soliani, Carolina, Tsuda, Yoshiaki, Bagnoli, Francesca, Gallo, Leonardo Ariel, Vendramin, Giovanni Giuseppe, Marchelli, Paula

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Incomplete sterols and hopanoids pathways in ciliates: Gene loss and acquisition during evolution as a source of biosynthetic genes by Tomazic, Mariela Luján, Poklepovich Caride, Tomás Javier, Nudel, Berta Clara, Nusblat, Alejandro David

“…Moreover, several of these sequences are present in multiples paralogs, like the C-7 desaturase in Paramecium, that carries six versions of the only one present in Tetrahymena. The phylogenetic analyses suggest a mixed origin for the genes involved in the biosynthesis of sterols and surrogates in this phylum; while the genes encoding enzymes of the pre-squalene pathway are most likely of bacterial origin, those involved in the post-squalene pathway, including the processing of sterols obtained from the environment, may have been partially retained or acquired indistinctly from lower eukaryotes or prokaryotes. …”
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High genetic variation in marginal fragmented populations at extreme climatic conditions of the Patagonian Cypress Austrocedrus chilensis by Arana, María Veronica, Gallo, Leonardo Ariel, Vendramin, Giovanni Giuseppe, Pastorino, Mario Juan, Sebastiani, Federico, Marchelli, Paula

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Use of DNA sequences for identification of possible biotypes of the fruit borer Neoleucinodes elegantalis (Lepidoptera: Crambidae), an important pest of Andean solanaceous fruits by Gallego Sánchez, Gerardo J., Zapata, Patricia, Castañeda, Oscar, Suárez Baron, Harold, Díaz Montilla, Ana Elizabeth, Vásquez, Wilson, Tohme, Joseph M.

“…Additionally, other DNA sequences used for molecular identification and phylogenetics studies, can be implemented to obtain a better understanding of the genetic variability across different animal groups and allows to acquire a enhanced description of the populations genetic variation. …”
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Diversidad genética de diaphorina citri en cultivos cítricos del Valle del Cauca y Quindío (Colombia) by Moncayo Donoso, Miguel Angel, Almanza Pinzón, Martha Isabel, Caicedovallejo, Na Milena, Muñoz Flórez, Jaime Eduardo, Montoya Lerma, James, Carabalí Muñoz, Arturo

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