Search Results - "In the Loop"

Improving virus diagnostics by International Potato Center

“…A Loop Mediated isothermal Amplification (LAMP) protocol for Sweet potato feathery mottle virus (SPFMV) was successfully tested in the field in Kakamega, Kenya utilizing a rapid extraction method and partially lyophilized reagents and enabled virus detection on site within 30 minutes. …”
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Novel mycoplasma nucleomodulin MbovP475 decreased cell viability by regulating expression of CRYAB and MCF2L2 by Zhao, G., Lu, D., Wang, S., Zhang, H., Zhu, X., Hao, Z., Dawood, A., Chen, Y., Schieck, Elise G., Hu, C., Chen, X., Yang, L., Guo, A.

“…Screening of various mutants affecting the potential DNA binding sites indicated that the residues 242NI243 within MbovP475 loop region of the helix-loop-helix domain were essential to its DNA binding activity, thereby contributing to decrease in BoMac cell viability. …”
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Ukama Ustawi’s Learning Alliance: scoping study - final report by Kumwenda, H., Kakuwa, B., Odeke, M., Podisi, B., Nohayi, Ngowenani

“…Within the context of a Learning Alliance, a contextual problem is resolved through several repetitive cycles. The double loop learning process at the end of each cycle is what gives rise to the name “Learning Alliance”.…”
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Mitochondrial DNA variation of indigenous goat populations from Peste-des-petits-ruminants outbreak in South Kivu, Democratic Republic of the Congo by Bwihangane, B.A., Gitao, G.C., Bebora, L.C., Tarekegn, M.G., Nicholas, S., Bacigale, Samy B., Svitek, Nicholas

“…This study was conducted to investigate the genetic diversity at d-loop of mitochondrial DNA and establish the possible maternal lineages of indigenous goat breeds in Democratic Republic of Congo (DRCongo). …”
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Involvement of a citrus meiotic recombination TTC-repeat motif in the formation of gross deletions generated by ionizing radiation and MULE activation by Terol, Javier, Ibanez, Victoria, Carbonell, Jose, Alonso, Roberto, Estornell, Leandro H., Licciardello, Concetta, Gut, Ivo G., Dopazo, Joaquín, Talón, Manuel

“…In Arrufatina, the loop brought the Mule ends nearby the 2 distinct insertion target sites and the inverted insertion of the transposable element between these target sites provoked the release of the in-between fragment. …”
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Genetic diversity of North Ethiopian indigenous sheep populations using mitochondrial DNA by Adhena, Mulata H.

“…For the haplotype diversity, 1088 bp of the d-loop region of the indigenous sheep populations was analysed. …”
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LAMP Assay protocol for field detection of bacterial wilt in potato by Sharma, K.

“…The International Potato Center has validated a field-deployable Loop-mediated Isothermal Amplification (LAMP) assay for detection of Ralstonia solanacearum spp., from stem, tuber, and soil samples without extensive resources. …”
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Faster, smarter inspections: IITA introduced LAMP Technology to Rwanda’s cassava field inspectors by International Institute of Tropical Agriculture

“…IITA strengthens Rwanda's agricultural inspection capacities by providing cutting-edge LAMP (Loop-mediated Isothermal Amplification) technology to the Rwanda Inspectorate, Competition and Consumer Protection Authority (RICA). …”
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Mitochondrial DNA diversity and origin of indigenous pigs in South China and their contribution to western modern pig breeds by Chen Wang, Yao-sheng Chen, Han Jianlin, De-lin Mo, Xiu-jin Li, Xiao-hong Liu

“…In the present study, we sequenced 534 novel mitochondrial DNA (mtDNA) D-loop and assembled 54 complete mitogenome sequences for all 17 indigenous pig breeds from Fujian, Guangdong, Guangxi and Hainan in South China. …”
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Disentangling community-based resource governance through knowledge systems mapping: insights from Community Fish Refuges in rural Cambodia by Baldivieso Soruco, C. R., Bonatti, M., de Silva, Sanjiv, Ou, P., Soeun, K. O., Neth, S., Sun, V., Rodríguez, T., Sean, V., Sithirith, M., Dubois, Mark, Sieber, S.

“…A participatory approach was employed using causal loop diagrams (CLDs) through focus group discussions (FGDs) with local stakeholders (n = 38). …”
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The maternal origin of indigenous domestic chicken from the Middle East, the north and the horn of Africa by Al-Jumaili, A.S., Boudali, S.F., Kebede, A., Al-Bayatti, S.A., Essa, A.A., Ahbara, A., Aljumaah, R.S., Alatiyat, R.M., Mwacharo, Joram M., Bjørnstad, G., Naqvi, A.N., Gaouar, S.B.S., Hanotte, Olivier H.

“…In this paper, using theD-loop of mitochondrial DNA as a maternally inherited genetic marker, we address the question of the origin and dispersal routes of domestic chicken of the Middle East (Iraq and Saudi Arabia), the northern part of the African continent (Algeria and Libya) and the Horn of Africa (Ethiopia).The analysis of the mtDNAD-loop of 706 chicken samples from Iraq (n = 107), Saudi Arabia (n = 185), Algeria (n = 88), Libya (n = 23), Ethiopia (n = 211) and Pakistan (n = 92) show the presence of five haplogroups (A, B, C, D and E), suggesting more than one maternal origin for the studied populations. …”
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River waste to goldmine: A tale of floating agriculture in vulnerable southern regions of Bangladesh by Sarker, Mou Rani, Kundu, Nanda Dulal, Sujan, Md. Hayder Khan, Salman, Md, McKenzie, Andrew M., Islam, Md. Monjurul, Rahman, Md. Alimur, Uddin, Md. Taj, Bhandari, Humnath, Sarkar, Md. Abdur Rouf

“…Floating agriculture also alleviates poverty by enhancing agricultural production and generating a positive feedback loop of increased income, food availability, and improved nutrition and health. …”
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Genotyping SSR length variants by isothermal DNA amplification by Lee, David, Ialicicco, Manuela, Akkinepalli, Harika, Morreale, Giacomo, Liu, Yan, Leung, Hei, Scippa, Gabriella S., Greenland, Andy, Mackay, Ian

“…Loop-mediated isothermal DNA amplification (LAMP) is an alternative method for the amplification of DNA sequences. …”
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A computational study of the interaction of the foot and mouth disease virus VP1 with monoclonal antibodies by Marrero Diaz De Villegas, Rubén, Rodríguez Limardo, Ramiro, Carrillo, Elisa Cristina, Konig, Guido Alberto, Turjanski, Adrián G.

“…Taking advantage over specific structural features of the GH loop, we have evaluated the influence of every amino acid residue at AnSA in the interaction with 2 neutralizing antibodies by molecular modeling techniques. …”
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LAMP Proves Reliable for Cassava and Sweetpotato Seed Certification as a Virus Detection Method in East Africa by Ogero, K.

“…This research brief reports results from an inter-laboratory comparison (ILC) validating the Loop-Mediated Isothermal Amplification (LAMP) assay for virus detection in cassava and sweetpotato seed certification systems across East Africa. …”
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Assimilation of remotely sensed soil moisture and vegetation with a crop simulation model for maize yield prediction by Ines, Amor V.M., Das, NN, Hansen, James, Njoku, EG

“…Assimilating LAI or soil moisture independently slightly improved the correlation of observed and simulated yields (R = 0.51 and 0.50) compared to no data assimilation (open-loop; R = 0.47) but prediction errors improved with reductions in MBE and RMSE by 0.5 and 0.5 Mg ha− 1 respectively for LAI assimilation while these were reduced by 1.8 and 1.1 Mg ha− 1 for soil moisture assimilation. …”
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Collaborative modelling to support forest management: qualitative systems analysis at Lumut Mountain, Indonesia by Purnomo, H., Yasmi, Yurdi, Prabhu, Ravi, Hakim, S., Jafar, A., Suprihatin

“…The model was developed by identifying forest management objectives, building a conceptual model using a causal loop diagram, and defining performance indicators. …”
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Complete nucleotide sequence and coding strategy of rice hoja blanca virus RNA4 by Ramírez, B.C., Lozano Potes, Iván, Constantino, LM, Haenni, AL

“…Between the two ORFs is an intergenic region of 524 nucleotides, part of which can theoretically adopt a stable stem-loop structure; the 5' and 3' ends can potentially base-pair over 16 nucleotides, producing a pan-handle configuration. …”
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The complete mitochondrial genome of Mong Cai pig (Susscrofa) in Vietnam by Thuy Nhien Thi Tran, Pan Ni, Jianhai Chen, Thuy Thi Le, Kemp, Stephen J., Han Jianlin, Haiyan Wang, Zhao, Shuhong

“…The total length of this mitochondrial genome is 16 632bp, including 1 non-coding control region (D-loop region), two ribosomal RNA genes, 13 protein-coding genes and 22 transfer RNA genes. …”
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Coliform as an indicator of waterborne microbial pathogens : identification using DNA sequencing by Tillgren, Beatrice

“…A suggestion on such a method is Loop-Mediated Isothermal Amplification (LAMP).…”