Search Results - "genome analysis"

Genomic regions associated with milling quality and grain shape identified in a set of random introgression lines of rice (Oryza sativa L.) by Zheng, T.Q., Xu, J.L., Li, Z.K., Zhai, H.Q., Wan, J.M.

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The Most Precious Things Are Not Jade and Pearls... by Ronald, Pamela, Leung, Hei

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Mutant resources in rice for functional genomics of the grasses by Krishnan, Arjun, Guiderdoni, Emmanuel, An, Gynheung, Hsing, Yue-ie C., Han, Chang-deok, Lee, Myung Chul, Yu, Su-May, Upadhyaya, Narayana, Ramachandran, Srinivasan, Zhang, Qifa, Sundaresan, Venkatesan, Hirochika, Hirohiko, Leung, Hei, Pereira, Andy

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The International Rice Information System. A platform for meta-analysis of rice crop data by McLaren, Christopher Graham, Bruskiewich, Richard M., Portugal, Arllet M., Cosico, Alexander B.

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Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza by Ammiraju, Jetty S. S., Zuccolo, Andrea, Yu, Yeisoo, Song, Xiang, Piegu, Benoit, Chevalier, Frederic, Walling, Jason G., Ma, Jianxin, Talag, Jayson, Brar, Darshan S., SanMiguel, Phillip J., Jiang, Ning, Jackson, Scott A., Panaud, Olivier, Wing, Rod A.

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The Oryza bacterial artificial chromosome library resource: construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus... by Ammiraju, Jetty S.S., Luo, Meizhong, Goicoechea, José L., Wang, Wenming, Kudrna, Dave, Mueller, Christopher, Talag, Jayson, Kim, HyeRan, Sisneros, Nicholas B., Blackmon, Barbara, Fang, Eric, Tomkins, Jeffery B., Brar, Darshan, Mackill, David, McCouch, Susan, Kurata, Nori, Lambert, Georgina, Galbraith, David W., Arumuganathan, K., Rao, Kiran, Walling, Jason G., Gill, Navdeep, Yu, Yeisoo, SanMiguel, Phillip, Soderlund, Carol, Jackson, Scott, Wing, Rod A.

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Genomics of Theileria parva by Nene, Vishvanath M., Bishop, Richard P., Quackenbush, J., Pertea, M., Salzberg, S.L., Taracha, E.A., Morzaria, S.P., Fraser, C.M., Gardner, M.

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Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. by Itoh, Takeshi, Tanaka, Tsuyoshi, Barrero, Roberto A., Yamasaki, Chisato, Fujii, Yasuyuki, Hilton, Phillip B., Antonio, Baltazar A., Aono, Hideo, Apweiler, Rolf, Bruskiewich, Richard, Bureau, Thomas, Burr, Frances, Costa de Oliveira, Antonio, Fuks, Galina, Habara, Takuya, Haberer, Georg, Han, Bin, Harada, Erimi, Hiraki, Aiko T., Hirochika, Hirohiko, Hoen, Douglas, Hokari, Hiroki, Hosokawa, Satomi, Hsing, Yue, Ikawa, Hiroshi, Ikeo, Kazuho, Imanishi, Tadashi, Ito, Yukiyo, Jaiswal, Pankaj, Kanno, Masako, Kawahara, Yoshihiro, Kawamura, Toshiyuki, Kawashima, Hiroaki, Khurana, Jitendra P., Kikuchi, Shoshi, Komatsu, Setsuko, Koyanagi, Kanako O., Kubooka, Hiromi, Lieberherr, Damien, Lin, Yao-Cheng, Lonsdale, David, Matsumoto, Takashi, Matsuya, Akihiro, McCombie, W. Richard, Messing, Joachim, Miyao, Akio, Mulder, Nicola, Nagamura, Yoshiaki, Nam, Jongmin, Namiki, Nobukazu, Numa, Hisataka, Nurimoto, Shin, O’Donovan, Claire, Ohyanagi, Hajime, Okido, Toshihisa, OOta, Satoshi, Osato, Naoki, Palmer, Lance E., Quetier, Francis, Raghuvanshi, Saurabh, Saichi, Naomi, Sakai, Hiroaki, Sakai, Yasumichi, Sakata, Katsumi, Sakurai, Tetsuya, Sato, Fumihiko, Sato, Yoshiharu, Schoof, Heiko, Seki, Motoaki, Shibata, Michie, Shimizu, Yuji, Shinozaki, Kazuo, Shinso, Yuji, Singh, Nagendra K., Smith-White, Brian, Takeda, Jun-ichi, Tanino, Motohiko, Tatusova, Tatiana, Thongjuea, Supat, Todokoro, Fusano, Tsugane, Mika, Tyagi, Akhilesh K., Vanavichit, Apichart, Wang, Aihui, Wing, Rod A., Yamaguchi, Kaori, Yamamoto, Mayu, Yamamoto, Naoyuki, Yu, Yeisoo, Zhang, Hao, Zhao, Qiang, Higo, Kenichi, Burr, Benjamin, Gojobori, Takashi, Sasaki, Takuji

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The Oryza map alignment project: the golden path to unlocking the genetic potential of wild rice species by Wing, Rod A., Ammiraju, Jetty S. S., Luo, Meizhong, Kim, HyeRan, Yu, Yeisoo, Kudrna, Dave, Goicoechea, José L., Wang, Wenming, Nelson, Will, Rao, Kiran, Brar, Darshan, Mackill, Dave J., Han, Bin, Soderlund, Cari, Stein, Lincoln, SanMiguel, Phillip, Jackson, Scott

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Genome-wide introgression lines and their use in genetic and molecular dissection of complex phenotypes in rice (Oryza sativa L.) by Li, Zhikang, Fu, Binying, Gao, Yong-Ming, Xu, Jianlong, Ali, J., Lafitte, H.R., Jiang, Yun-Zhu, Rey, J. Domingo, Vijayakumar, C. H. M., Maghirang, R., Zheng, Tianqing, Zhu, Ling-Hua

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Comparing genomic expression patterns across plant species reveals highly diverged transcriptional dynamics in response to salt stress by Walia, Harkamal, Wilson, Clyde, Ismail, Abdelbagi M., Close, Timothy J., Cui, Xinping

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New insights into Oryza genome evolution: high gene colinearity and differential retrotransposon amplification by Zhang, Shibo, Gu, Yong Qiang, Singh, Jaswinder, Coleman-Derr, Devin, Brar, Darshan S., Jiang, Ning, Lemaux, Peggy G.

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Predicting durability of a disease resistance gene based on an assessment of the fitness loss and epidemiological consequences of avirulence gene mutation by Vera Cruz, Casiana M., Bai, Jianfa, Oña, Isabelita, Leung, Hei, Nelson, Rebecca J., Mew, T.W., Leach, Jan E.

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Phylogenomic relationships of rice oxalate oxidases to the cupin superfamily and their association with disease resistance QTL by Carrillo, Maria Gay C., Goodwin, Paul H., Leach, Jan E., Leung, Hei, Vera Cruz, Casiana M.

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Characterization and comparative analysis of the genome of Puccinia sorghi Schwein, the causal agent of maize common rust by Rochi, Lucía, Dieguez, Maria Jose, Burguener, Germán, Darino, Martín Alejandro, Pergolesi, María Fernanda, Ingala, Lorena Romina, Cuyeu, Alba Romina, Turjanski, Adrián, Kreff, Enrique D., Sacco, Francisco

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A high-throughput genomic tool: diversity array technology complementary for rice genotyping by Xie, Yong, McNally, Kenneth, Li, Cheng-Yun, Leung, Hei, Zhu, Youyong

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Chemical- and irradiation-induced mutants of indica rice IR64 for forward and reverse genetics by Wu, Jian-Li, Wu, Chanjian, Lei, Cailin, Baraoidan, Marietta, Bordeos, Alicia, Madamba, Ma. Reina Suzette, Ramos-Pamplona, Marilou, Mauleon, Ramil, Portugal, Arlett, Ulat, Victor Jun, Bruskiewich, Richard, Wang, Guo-Liang, Leach, Jan, Khush, Gurdev, Leung, Hei

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What it will take to feed 5.0 billion rice consumers in 2030 by Khush, Gurdev S.

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Identification of candidate genes for drought stress tolerance in rice by the integration of a genetic (QTL) map with rice genome physical map by Wang, Xu-sheng, Zhu, Jun, Mansueto, Locedie, Bruskiewich, Richard

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Genomics-based diagnostic marker development for Xanthomonas oryzae pv. oryzae and X. oryzae pv. oryzicola. by Lang, Jillian M., Hamilton, John P., Diaz, Maria Genaleen Q., Van Sluys, Marie Anne, Burgos, Ma. Ruby G., Vera Cruz, Casiana M., Buell, C. Robin, Tisserat, Ned A., Leach, Jan E.

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