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Genome wide association study of MAGIC population reveals a novel QTL for salinity and sodicity tolerance in rice by Krishnamurthy, S.L., Sharma, P.C., Dewan, D., Lokeshkumar, B.M., Rathor, Suman, Warraich, A.S., Vinaykumar, N.M., Leung, Hei, Singh, R.K.

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Strong genotype by environment interactions in the rice Global MAGIC population across seedling stage drought by Moyers, Brook T., Henry, Amelia, Raghavan, Chitra, Zaw, Hein, Marrano, Annarita, Leung, Hei, McKay, John

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Accumulating candidate genes for broad-spectrum resistance to rice blast in a drought-tolerant rice cultivar by Carrillo, Maria Gay C., Martin, Federico, Variar, Mukund, Bhatt, J.C., Pérez-Quintero, Alvaro L., Leung, Hei, Leach, Jan E., Vera Cruz, Casiana M.

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Unraveling regulatory divergence, heterotic malleability, and allelic imbalance switching in rice due to drought stress by Ereful, Nelzo C., Laurena, Antonio, Liu, Li-Yu, Kao, Shu-Min, Tsai, Eric, Greenland, Andy, Powell, Wayne, Mackay, Ian, Leung, Hei

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Genome-wide association coupled gene to gene interaction studies unveil novel epistatic targets among major effect loci impacting rice grain chalkiness by Misra, Gopal, Badoni, Saurabh, Parween, Sabiha, Singh, Rakesh Kumar, Leung, Hei, Ladejobi, OluFunmilayo, Mott, Richard, Sreenivasulu, Nese

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Resistance and susceptibility QTL identified in a rice MAGIC population by screening with a minor-effect virulence factor from Xanthomonas oryzae pv. oryzae by Huerta, Alejandra I., Delorean, Emily E., Bossa‐Castro, Ana M., Tonnessen, Bradley W., Raghavan, Chitra, Corral, Rene, Pérez‐Quintero, Álvaro L., Leung, Hei, Verdier, Valérie, Leach, Jan E.

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RNA-seq reveals differentially expressed genes between two indica inbred rice genotypes associated with drought-yield QTLs by Ereful, Nelzo C., Liu, Li-Yu, Greenland, Andy, Powell, Wayne, Mackay, Ian, Leung, Hei

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A platinum standard pan-genome resource that represents the population structure of Asian rice by Zhou, Yong, Chebotarov, Dmytro, Kudrna, Dave, Llaca, Victor, Lee, Seunghee, Rajasekar, Shanmugam, Mohammed, Nahed, Al-Bader, Noor, Sobel-Sorenson, Chandler, Parakkal, Praveena, Arbelaez, Lady Johanna, Franco, Natalia, Alexandrov, Nickolai, Hamilton, Ruaraidh Sackville, Leung, Hei, Mauleon, Ramil, Lorieux, Mathias, Zuccolo, Andrea, McNally, Kenneth, Zhang, Jianwei, Wing, Rod A.

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Twelve Platinum-Standard Reference Genomes Sequences (PSRefSeq) that complete the full range of genetic diversity of Asian rice by Zhou, Yong, Chebotarov, Dmytro, Kudrna, Dave, Llaca, Victor, Lee, Seunghee, Rajasekar, Shanmugam, Mohammed, Nahed, Al-Bader, Noor, Sobel-Sorenson, Chandler, Parakkal, Praveena, Arbelaez, Lady Johanna, Franco, Natalia, Alexandrov, Nickolai, Hamilton, Ruaraidh Sackville, Leung, Hei, Mauleon, Ramil, Lorieux, Mathias, Zuccolo, Andrea, McNally, Kenneth, Zhang, Jianwei, Wing, Rod A.

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Exploring genetic architecture of grain yield and quality traits in a 16-way indica by japonica rice MAGIC global population by Zaw, Hein, Raghavan, Chitra, Pocsedio, Arnel, Swamy, B.P. Mallikarjuna, Jubay, Mona Liza, Singh, Rakesh Kumar, Bonifacio, Justine, Mauleon, Ramil, Hernandez, Jose E., Mendioro, Merlyn S., Gregorio, Glenn B., Leung, Hei

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Genome-wide association mapping in a rice MAGIC Plus population detects QTLs and genes useful for biofortification by Descalsota, Gwen Iris L., Swamy, B.P. Mallikarjuna, Zaw, Hein, Inabangan-Asilo, Mary Ann, Amparado, Amery, Mauleon, Ramil, Chadha-Mohanty, Prabhjit, Arocena, Emily C., Raghavan, Chitra, Leung, Hei, Hernandez, Jose E., Lalusin, Antonio B., Mendioro, Merlyn S., Diaz, Ma. Genaleen Q., Reinke, Russell

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Genomic variation in 3,010 diverse accessions of Asian cultivated rice by Wang, Wensheng, Mauleon, Ramil, Hu, Zhiqiang, Chebotarov, Dmytro, Tai, Shuaishuai, Wu, Zhichao, Li, Min, Zheng, Tianqing, Fuentes, Roven Rommel, Zhang, Fan, Mansueto, Locedie, Copetti, Dario, Sanciangco, Millicent, Palis, Kevin Christian, Xu, Jianlong, Sun, Chen, Fu, Binying, Zhang, Hongliang, Gao, Yongming, Zhao, Xiuqin, Shen, Fei, Cui, Xiao, Yu, Hong, Li, Zichao, Chen, Miaolin, Detras, Jeffrey, Zhou, Yongli, Zhang, Xinyuan, Zhao, Yue, Kudrna, Dave, Wang, Chunchao, Li, Rui, Jia, Ben, Lu, Jinyuan, He, Xianchang, Dong, Zhaotong, Xu, Jiabao, Li, Yanhong, Wang, Miao, Shi, Jianxin, Li, Jing, Zhang, Dabing, Lee, Seunghee, Hu, Wushu, Poliakov, Alexander, Dubchak, Inna, Ulat, Victor Jun, Borja, Frances Nikki, Mendoza, John Robert, Ali, Jauhar, Li, Jing, Gao, Qiang, Niu, Yongchao, Yue, Zhen, Naredo, Ma.Elizabeth B., Talag, Jayson, Wang, Xueqiang, Li, Jinjie, Fang, Xiaodong, Yin, Ye, Glaszmann, Jean-Christophe, Zhang, Jianwei, Li, Jiayang, Hamilton, Ruaraidh Sackville, Wing, Rod A., Ruan, Jue, Zhang, Gengyun, Wei, Chaochun, Alexandrov, Nickolai, McNally, Kenneth L., Li, Zhikang, Leung, Hei

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Genome-wide association study of seedling stage salinity tolerance in temperate japonica rice germplasm by Batayeva, Dariga, Labaco, Benedick, Ye, Changrong, Li, Xiaolin, Usenbekov, Bakdaulet, Rysbekova, Aiman, Dyuskalieva, Gulzhamal, Vergara, Georgina, Reinke, Russell, Leung, Hei

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Increasing leaf vein density via mutagenesis in rice results in an enhanced rate of photosynthesis, smaller cell sizes and can reduce interveinal mesophyll cell number by Feldman, Aryo B., Leung, Hei, Baraoidan, Marietta, Elmido-Mabilangan, Abigail, Canicosa, Irma, Quick, William P., Sheehy, John, Murchie, Erik H.

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Approaches in characterizing genetic structure and mapping in a rice multiparental population by Raghavan, Chitra, Mauleon, Ramil, Lacorte, Vanica, Jubay, Monalisa, Zaw, Hein, Bonifacio, Justine, Singh, Rakesh Kumar, Huang, B Emma, Leung, Hei

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Field-based high throughput phenotyping rapidly identifies genomic regions controlling yield components in rice by Tanger, Paul, Klassen, Stephen, Mojica, Julius P., Lovell, John T., Moyers, Brook T., Baraoidan, Marietta, Naredo, Maria Elizabeth B., McNally, Kenneth L., Poland, Jesse, Bush, Daniel R., Leung, Hei, Leach, Jan E., McKay, John K.

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Analysis of allelic imbalance in rice hybrids under water stress and association of asymmetrically expressed genes with drought-response QTLs by Ereful, Nelzo C., Liu, Li-Yu, Tsai, Eric, Kao, Shu-Min, Dixit, Shalabh, Mauleon, Ramil, Malabanan, Katrina, Thomson, Michael, Laurena, Antonio, Lee, David, Mackay, Ian, Greenland, Andy, Powell, Wayne, Leung, Hei

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Genome-wide prediction models that incorporate de novo GWAS are a powerful new tool for tropical rice improvement by Meng, Lijun, Zhao, Xiangqian, Ponce, Kimberly, Ye, Guoyou, Leung, Hei

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Dissection of the genetic architecture of rice resistance to the blast fungus Magnaporthe oryzae by Kang, Houxiang, Wang, Yue, Peng, Shasha, Zhang, Yanli, Xiao, Yinghui, Wang, Dan, Qu, Shaohong, Li, Zhiqiang, Yan, Shuangyong, Wang, Zhilong, Liu, Wende, Ning, Yuese, Korniliev, Pavel, Leung, Hei, Mezey, Jason, McCouch, Susan R., Wang, Guo-Liang

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Open access resources for genome-wide association mapping in rice by McCouch, Susan R., Wright, Mark H., Tung, Chih-Wei, Maron, Lyza G., McNally, Kenneth L., Fitzgerald, Melissa, Singh, Namrata, DeClerck, Genevieve, Agosto-Perez, Francisco, Korniliev, Pavel, Greenberg, Anthony J., Naredo, Ma. Elizabeth B., Mercado, Sheila Mae Q., Harrington, Sandra E., Shi, Yuxin, Branchini, Darcy A., Kuser-Falcão, Paula R., Leung, Hei, Ebana, Kowaru, Yano, Masahiro, Eizenga, Georgia, McClung, Anna, Mezey, Jason

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