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Drought response QTLs in a Super Basmati × Azucena population by high‐density GBS‐based SNP linkage mapping by Waheed, Raheela, Ignacio, John Carlos, Arbelaez, Juan David, Juanillas, Venice Margarette, Asif, Muhammad, Henry, Amelia, Kretzschmar, Tobias, Arif, Muhammad

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Enriched-GWAS and transcriptome analysis to refine and characterize a major QTL for anaerobic germination tolerance in rice by Tnani, Hedia, Chebotarov, Dmytro, Thapa, Ranjita, Ignacio, John Carlos I., Israel, Walter K., Quilloy, Fergie A., Dixit, Shalabh, Septiningsih, Endang M., Kretzschmar, Tobias

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Genetic mapping by sequencing more precisely detects loci responsible for anaerobic germination tolerance in rice by Ignacio, John Carlos I., Zaidem, Maricris, Casal, Carlos, Dixit, Shalabh, Kretzschmar, Tobias, Samaniego, Jaime M., Mendioro, Merlyn S., Weigel, Detlef, Septiningsih, Endang M.

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Comparative transcriptomics and co-expression networks reveal tissue- and genotype-specific responses of qDTYs to reproductive-stage drought stress in rice (Oryza sativa L.) by Tarun, Jeshurun Asher, Mauleon, Ramil, Arbelaez, Juan David, Catausan, Sheryl, Dixit, Shalabh, Kumar, Arvind, Brown, Patrick, Kohli, Ajay, Kretzschmar, Tobias

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An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies by Morales, Karina Y., Singh, Namrata, Perez, Francisco Agosto, Ignacio, John Carlos, Thapa, Ranjita, Arbelaez, Juan D., Tabien, Rodante E., Famoso, Adam, Wang, Diane R., Septiningsih, Endang M., Shi, Yuxin, Kretzschmar, Tobias, McCouch, Susan R., Thomson, Michael J.

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Predicting agronomic traits and associated genomic regions in diverse rice landraces using marker stability by Orhobor, Oghenejokpeme I., Alexandrov, Nickolai N., Chebotarov, Dmytro, Kretzschmar, Tobias, McNally, Kenneth L., Sanciangco, Millicent D., King, Ross D.

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1k-RiCA (1K-Rice Custom Amplicon) a novel genotyping amplicon-based SNP assay for genetics and breeding applications in rice by Arbelaez, Juan David, Dwiyanti, Maria Stefanie, Tandayu, Erwin, Llantada, Krizzel, Jarana, Annalhea, Ignacio, John Carlos, Platten, John Damien, Cobb, Joshua, Rutkoski, Jessica Elaine, Thomson, Michael J., Kretzschmar, Tobias

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Methodology: ssb-MASS: a single seed-based sampling strategy for marker-assisted selection in rice by Arbelaez, Juan David, Tandayu, Erwin, Reveche, Maria Ymber, Jarana, Annalhea, van Rogen, Petra, Sandager, Line, Stolt, Patrik, Ng, Enghwa, Varshney, Rajeev K., Kretzschmar, Tobias, Cobb, Joshua

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Variation in seed longevity among diverse Indica rice varieties by Lee, Jae-Sung, Velasco-Punzalan, Marlina, Pacleb, Myrish, Valdez, Rocel, Kretzschmar, Tobias, McNally, Kenneth L., Ismail, Abdel M., Sta. Cruz, Pompe C., Hamilton, Ruaraidh Sackville, Hay, Fiona R.

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Rice Galaxy: an open resource for plant science by Juanillas, Venice, DeReeper, Alexis, Beaume, Nicolas, Droc, Gaëtan, Dizon, Joshua, Mendoza, John Robert, Perdon, Jon Peter, Mansueto, Locedie, Triplett, Lindsay, Lang, Jillian, Zhou, Gabriel, Ratharanjan, Kunalan, Plale, Beth, Haga, Jason, Leach, Jan E., Ruiz, Manuel, Thomson, Michael, Alexandrov, Nickolai, Larmande, Pierre, Kretzschmar, Tobias, Mauleon, Ramil P.

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Exploring the genetic diversity within traditional Philippine pigmented Rice by Mbanjo, Edwige Gaby Nkouaya, Jones, Huw, Caguiat, Xavier Greg Isaguirre, Carandang, Socorro, Ignacio, John Carlos, Ferrer, Marilyn Cruz, Boyd, Lesley Ann, Kretzschmar, Tobias

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Transforming rice breeding: re-designing the irrigated breeding pipeline at the International Rice Research Institute (IRRI) by Collard, Bertrand C. Y., Gregorio, Glenn B., Thomson, Michael J., Islam, Md. Rafiqul, Vergara, Georgina V., Laborte, Alice G., Nissila, Eero., Kretzschmar, Tobias, Cobb, Joshua N.

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DNA fingerprinting at farm level maps rice biodiversity across Bangladesh and reveals regional varietal preferences by Kretzschmar, Tobias, Mbanjo, Edwige Gaby Nkouaya, Magalit, Grace Angelique, Dwiyanti, Maria Stefanie, Habib, Muhammad Ashraful, Diaz, Maria Genaleen, Hernandez, Jose, Huelgas, Zenaida, Malabayabas, Maria Luz, Das, Subrata Kumar, Yamano, Takashi

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Transcriptional response of rice flag leaves to restricted external phosphorus supply during grain filling in rice cv. IR64 by Jeong, Kwanho, Pantoja, Omar, Baten, Abdul, Waters, Daniel, Kretzschmar, Tobias, Wissuwa, Matthias, Julia, Cecile C., Heuer, Sigrid, Rose, Terry J.

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Genome-wide association and gene validation studies for early root vigour to improve direct seeding of rice by Wang, Fanmiao, Longkumer, Toshisangba, Catausan, Sheryl C., Calumpang, Carla Lenore F., Tarun, Jeshurun A., Cattin-Ortola, Jerome, Ishizaki, Takuma, Pariasca Tanaka, Juan, Rose, Terry, Wissuwa, Matthias, Kretzschmar, Tobias

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Prospects for genetic improvement in internal nitrogen use efficiency in rice by Rose, Terry, Kretzschmar, Tobias, Waters, Daniel L. E., Balindong, Jeanette, Wissuwa, Matthias

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Large-scale deployment of a rice 6 K SNP array for genetics and breeding applications by Thomson, Michael J., Singh, Namrata, Dwiyanti, Maria S., Wang, Diane R., Wright, Mark H., Perez, Francisco Agosto, DeClerck, Genevieve, Chin, Joong Hyoun, Malitic-Layaoen, Geraldine A., Juanillas, Venice Margarette, Dilla-Ermita, Christine J., Mauleon, Ramil, Kretzschmar, Tobias, McCouch, Susan R.

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Can natural variation in grain P concentrations be exploited in rice breeding to lower fertilizer requirements? by Wang, Fanmiao, King, James Douglas Morrison, Rose, Terry, Kretzschmar, Tobias, Wissuwa, Matthias

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Genetic dissection for zinc deficiency tolerance in rice using bi-parental mapping and association analysis by Lee, Jae-Sung, Sajise, Andres Godwin C., Gregorio, Glenn B., Kretzschmar, Tobias, Ismail, Abdelbagi M., Wissuwa, Matthias

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Genome-wide association analysis tracks bacterial leaf blight resistance loci in rice diverse germplasm by Dilla-Ermita, Christine Jade, Tandayu, Erwin, Juanillas, Venice Margarette, Detras, Jeffrey, Lozada, Dennis Nicuh, Dwiyanti, Maria Stefanie, Vera Cruz, Casiana, Mbanjo, Edwige Gaby Nkouaya, Ardales, Edna, Diaz, Maria Genaleen, Mendioro, Merlyn, Thomson, Michael J., Kretzschmar, Tobias

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