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Structural variants in 3000 rice genomes by Fuentes, Roven Rommel, Chebotarov, Dmytro, Duitama, Jorge, Smith, Sean, Hoz, Juan Fernando de la, Mohiyuddin, Marghoob, Wing, Rod A., McNally, Kenneth L., Tatarinova, Tatiana, Grigoriev, Andrey, Mauleon, Ramil, Alexandrov, Nickolai

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State of ex situ conservation of landrace groups of 25 major crops by Ramírez Villegas, Julián Armando, Khoury, Colin K., Achicanoy Estrella, Harold Armando, Díaz, Maria Victoria, Mendez Alzate, Andres Camilo, Sosa, Chrystian C., Kehel, Zakaria, Guarino, Luigi, Abberton, Michael T., Aunario, Jorrel, Al Awar, Bashir, Alarcón, Juan Carlos, Amri, Ahmed, Anglin, Noelle L., Azevedo, Vania, Aziz, Khadija, Capilit, Grace Lee, Chavez, Oswaldo, Chebotarov, Dmytro, Costich, Denise E., Debouck, Daniel G., Ellis, David, Falalou, Hamidou, Fiu, Albert, Ghanem, Michel Edmond, Giovannini, Peter, Goungoulou, Alphonse J., Gueye, Badara, El Hobyb, Amal Ibn, Jamnadass, Ramni, Jones, Christopher S., Kpeki, Bienvenu, Lee, Jae-Sung, McNally, Kenneth L., Muchugi, Alice, Ndjiondjop, Marie-Noelle, Oyatomi, Olaniyi, Payne, Thomas S., Ramachandran, Senthil, Rossel, Genoveva, Roux, Nicolas Stephan M., Ruas, Max, Sansaloni, Carolina P., Sardos, Julie, Setiyono, Tri Deri, Tchamba, Marimagne, Houwe, Ines van den, Velazquez, J. Alejandro, Venuprasad, Ramaiah, Wenzl, Peter, Yazbek, Mariana, Zavala, Cristian

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Response of Southeast Asian rice root architecture and anatomy phenotypes to drought stress by Siangliw, Jonaliza L., Thunnom, Burin, Natividad, Mignon A., Quintana, Marinell R., Chebotarov, Dmytro, McNally, Kenneth L., Lynch, Jonathan P., Brown, Kathleen M., Henry, Amelia

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Aus rice root architecture variation contributing to grain yield under drought suggests a key role of nodal root diameter class by Liao, Qiong, Chebotarov, Dmytro, Islam, Mohammad S., Quintana, Marinell R., Natividad, Mignon A., Ocampo, Marjorie de, Beredo, Joseph C., Torres, Rolando O., Zhang, Zhenhua, Song, Haixing, Price, Adam H., McNally, Kenneth L., Henry, Amelia

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Rice Gene Index: A comprehensive pan-genome database for comparative and functional genomics of Asian rice by Yu, Zhichao, Chen, Yongming, Zhou, Yong, Zhang, Yulu, Li, Mengyuan, Ouyang, Yidan, Chebotarov, Dmytro, Mauleon, Ramil, Zhao, Hu, Xie, Weibo, McNally, Kenneth L., Wing, Rod A., Guo, Weilong, Zhang, Jianwei

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A high-performance computational workflow to accelerate GATK SNP detection across a 25-genome dataset by Zhou, Yong, Kathiresan, Nagarajan, Yu, Zhichao, Rivera, Luis F., Yang, Yujian, Thimma, Manjula, Manickam, Keerthana, Chebotarov, Dmytro, Mauleon, Ramil, Chougule, Kapeel, Wei, Sharon, Gao, Tingting, Green, Carl D., Zuccolo, Andrea, Xie, Weibo, Ware, Doreen, Zhang, Jianwei, McNally, Kenneth L., Wing, Rod A.

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Meta-analysis of rice phosphoproteomics data to understand variation in cell signaling across the rice pan-genome by Ramsbottom, Kerry A., Prakash, Ananth, Perez-Riverol, Yasset, Camacho, Oscar Martin, Sun, Zhi, Kundu, Deepti J., Bowler-Barnett, Emily, Martin, Maria, Fan, Jun, Chebotarov, Dmytro, McNally, Kenneth L., Deutsch, Eric W., Vizcaíno, Juan Antonio, Jones, Andrew R.

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Genotypic screening for salinity tolerance of rice genotypes from Eastern and Southern Africa at seedling stage by Lutambi, Kefrine Kennedy, Henry, Amelia, De Ocampo, Marjorie, Chebotarov, Dmytro, Pedersen, Ole, Nchimbi-Msolla, Susan, Kilasi, Newton L.

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Rice Gene Index: A comprehensive pan-genome database for comparative and functional genomics of Asian rice by Yu, Zhichao, Chen, Yongming, Zhou, Yong, Zhang, Yulu, Li, Mengyuan, Ouyang, Yidan, Chebotarov, Dmytro, Mauleon, Ramil, Zhao, Hu, Xie, Weibo, McNally, Kenneth L., Wing, Rod A., Guo, Weilong, Zhang, Jianwei

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Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice by Zhou, Yong, Yu, Zhichao, Chebotarov, Dmytro, Chougule, Kapeel, Lu, Zhenyuan, Rivera, Luis F., Kathiresan, Nagarajan, Al-Bader, Noor, Mohammed, Nahed, Alsantely, Aseel, Mussurova, Saule, Santos, João, Thimma, Manjula, Troukhan, Maxim, Fornasiero, Alice, Green, Carl D., Copetti, Dario, Kudrna, David, Llaca, Victor, Lorieux, Mathias, Zuccolo, Andrea, Ware, Doreen, McNally, Kenneth, Zhang, Jianwei, Wing, Rod A.

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Novel sources of pre-harvest sprouting resistance for japonica rice improvement by Lee, Jae-Sung, Chebotarov, Dmytro, McNally, Kenneth L., Pede, Valerien, Setiyono, Tri Deri, Raquid, Rency, Hyun, Woong-Jo, Jeung, Ji-Ung, Kohli, Ajay, Mo, Youngjun

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Genetic factors enhancing seed longevity in tropical japonica rice by Raquid, Rency, Kohli, Ajay, Reinke, Russell, Dionisio-Sese, Maribel, Kwak, Jieun, Chebotarov, Dmytro, Mo, Youngjun, Lee, Jae-Sung

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Enriched-GWAS and transcriptome analysis to refine and characterize a major QTL for anaerobic germination tolerance in rice by Tnani, Hedia, Chebotarov, Dmytro, Thapa, Ranjita, Ignacio, John Carlos I., Israel, Walter K., Quilloy, Fergie A., Dixit, Shalabh, Septiningsih, Endang M., Kretzschmar, Tobias

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Advanced strategic research to promote the use of rice genetic resources by Lee, Jae-Sung, Chebotarov, Dmytro, Platten, John Damien, McNally, Kenneth, Kohli, Ajay

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A platinum standard pan-genome resource that represents the population structure of Asian rice by Zhou, Yong, Chebotarov, Dmytro, Kudrna, Dave, Llaca, Victor, Lee, Seunghee, Rajasekar, Shanmugam, Mohammed, Nahed, Al-Bader, Noor, Sobel-Sorenson, Chandler, Parakkal, Praveena, Arbelaez, Lady Johanna, Franco, Natalia, Alexandrov, Nickolai, Hamilton, Ruaraidh Sackville, Leung, Hei, Mauleon, Ramil, Lorieux, Mathias, Zuccolo, Andrea, McNally, Kenneth, Zhang, Jianwei, Wing, Rod A.

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Multiple streams of genetic diversity in Japonica rice by Santos, João D., Billot, Claire, Chebotarov, Dmytro, Droc, Gaëtan, Lorieux, Mathias, McNally, Kenneth L., Glaszmann, Jean Christophe

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Twelve Platinum-Standard Reference Genomes Sequences (PSRefSeq) that complete the full range of genetic diversity of Asian rice by Zhou, Yong, Chebotarov, Dmytro, Kudrna, Dave, Llaca, Victor, Lee, Seunghee, Rajasekar, Shanmugam, Mohammed, Nahed, Al-Bader, Noor, Sobel-Sorenson, Chandler, Parakkal, Praveena, Arbelaez, Lady Johanna, Franco, Natalia, Alexandrov, Nickolai, Hamilton, Ruaraidh Sackville, Leung, Hei, Mauleon, Ramil, Lorieux, Mathias, Zuccolo, Andrea, McNally, Kenneth, Zhang, Jianwei, Wing, Rod A.

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Predicting agronomic traits and associated genomic regions in diverse rice landraces using marker stability by Orhobor, Oghenejokpeme I., Alexandrov, Nickolai N., Chebotarov, Dmytro, Kretzschmar, Tobias, McNally, Kenneth L., Sanciangco, Millicent D., King, Ross D.

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Fine scale genomic signals of admixture and alien introgression among Asian rice landraces by Santos, João D., Chebotarov, Dmytro, McNally, Kenneth L., Bartholomé, Jérôme, Droc, Gaëtan, Billot, Claire, Glaszmann, Jean Christophe

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A high proportion of beta-tocopherol in vitamin E is associated with poor seed longevity in rice produced under temperate conditions by Lee, Jae-Sung, Kwak, Jieun, Cho, Jun-Hyeon, Chebotarov, Dmytro, Yoon, Mi-Ra, Lee, Jeom-Sig, Hamilton, Ruaraidh Sackville, Hay, Fiona R.

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