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Virus detection by high-throughput sequencing of small RNAs: large-scale performance testing of sequence analysis strategies by Massart, S., Chiumenti, M., Jonghe, K., Glover, R., Haegeman, A., Koloniuk, I., Kominek, P., Kreuze, Jan F., Kutnjak, D., Lotos, L., Maclot, F., Maliogka, V., Maree, Hans J.

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A Primer on the Analysis of High-Throughput Sequencing Data for Detection of Plant Viruses by Kutnjak, D., Tamisier, Lucie, Adams, I., Boonham, N., Candresse, T., Chiumenti, M., Jonghe, K., Kreuze, Jan F., Lefebvre, M., Silva, G., Malapi-Wight, M., Margaria, P., Mavrič Pleško, I., McGreig, S., Miozzi, L., Remenant, B., Reynard, J.S., Rollin, J., Rott, M., Schumpp, O., Massart, S., Haegeman, A.

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Interlaboratory Comparison Study on Ribodepleted Total RNA High-Throughput Sequencing for Plant Virus Diagnostics and Bioinformatic Competence by Gaafar, Y.Z.A., Westenberg, M., Botermans, M., László, K., Jonghe, K., Foucart, Y., Ferretti, L., Kutnjak, D., Pecman, A., Mehle, N., Kreuze, Jan F., Muller, G., Vakirlis, N., Beris, D., Varveri, C., Ziebell, H.

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Deep sequencing of virus derived small interfering RNAs and RNA from viral particles shows highly similar mutational landscape of a plant virus population by Kutnjak, D., Rupar, M., Gutiérrez Aguirre, I., Curk, T., Kreuze, Jan F., Ravnikar, M.

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