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AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture by Harper, L., Campbell, J., Cannon, Ethalinda K.S., Jung, S., Poelchau, M., Walls, R., Andorf, C., Arnaud, Elizabeth, Berardini, T.Z., Birkett, Clay L., Cannon, S., Carson, J., Condon, B., Cooper, Laurel D., Dunn, N., Elsik, C.G., Farmer, A, Ficklin, S.P., Grant, D., Grau, E., Herndon, N., Hu, Z.L., Humann, J., Jaiswal, P., Jonquet, C., Laporte, Marie-Angélique, Larmande, Pierre, Lazo, G., McCarthy, F., Menda, N., Mungall, C.J., Muñoz Torres, Mónica Cecilia, Naithani, S., Nelson, R., Nesdill, D., Park, C., Reecy, J., Reiser, L., Sanderson, Lacey-Anne, Sen, T.Z., Staton, M., Subramaniam, S., Tello-Ruiz, M.K., Unda, V., Unni, D., Wang, L., Ware, D., Wegrzyn, J., Williams, J., Woodhouse, M.T., Yu, J., Main, D.

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Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report by Matentzoglu, N., Balhoff, J., Bello, S., Boerkoel, C., Bradford, Y., Carmody, L., Cooper, Laurel D., Grove, C., Harris, N., Köhler, S., Laporte, Marie-Angélique, Laulederkind, S., Lee, R., Mazandu, G., McMurry, J., Mungall, C., Osumi-Sutherland, D., Pilgrim, C., Rageth, K., Robb, S., Robinson, P., Segerdell, E., Thessen, A., Vasilevsky, N., Zhang, X., Haendel, M.

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Phenotype Ontologies Traversing All the Organisms (POTATO) workshop: 2nd edition. by Matentzoglu, N, Balhoff, J.P., Bello, S.M., Bradford, Y.M., Carmody, L.C., Cooper, Laurel D., Laporte, Marie-Angélique

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The ontologies community of practice: a CGIAR initiative for Big Data in agrifood systems by Arnaud, Elizabeth, Laporte, Marie-Angélique, Kim, Soonho, Aubert, Céline, Leonelli, Sabina, Miro, Berta, Cooper, Laurel D., Jaiswal, Pankaj, Kruseman, Gideon K., Shrestha, Rosemary, Buttigieg, Pier Luigi, Mungall, Christopher J., Pietragalla, Julian, Agbona, Afolabi, Muliro, Jacqueline, Detras, Jeffrey, Hualla, Vilma, Rathore, Abhishek, Das, Roma Rani, Dieng, Ibnou, Bauchet, Guillaume J., Menda, Naama, Pommier, Cyril, Shaw, Felix, Lyon, David, Mwanzia, Leroy, Juarez, Henry, Bonaiuti, Enrico, Chiputwa, Brian, Obileye, Olatunbosun, Auzoux, Sandrine, Yeumo, Esther Dzalé, Mueller, Lukas A., Silverstein, Kevin, Lafargue, Alexandra, Antezana, Erick, Devare, Medha, King, Brian

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Crop Ontology Governance and Stewardship Framework by Arnaud, Elizabeth, Hazekamp, Tom, Laporte, Marie-Angélique, Antezana, Erick, Andres Hernandez, Liliana, Pot, David, Shrestha, Rosemary, Dreher, Kate, Castiblanco, Valheria, Menda, Naama, Fabio Guerrero, Alberto, Hualle, Vilma, Salas, Elisa, Mendes, Thiago, Makunde, Godwill, Chaves, Ines, Rathore, Abhishek, Das, Roma Rani, Afolabi, Agbona, Pietragalla, Julian, Pommier, Cyril, Michotey, Célia, Detras, Jeffrey, McNally, Kenneth L., Borja, Nikki, Winger, Luzie, Cooper, Laurel D., Jaiswal, Pankaj, Mauleon, Ramil, Yu, Jing

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Data sharing and ontology use among agricultural genetics, genomics, and breeding databases and resources of the Agbiodata Consortium by Clarke, Jennifer L., Cooper, Laurel D., Poelchau, Monica F., Berardini, Tanya Z., Elser, Justin, Farmer, Andrew D., Ficklin, Stephen, Kumari, Sunita, Laporte, Marie-Angélique, Nelson, Rex T., Sadohara, Rie, Selby, Peter, Thessen, Anne E., Whitehead, Brandon, Sen, Taner Z.

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Planteome 2024 Update: Reference ontologies and knowledgebase for plant biology by Cooper, Laurel D., Elser, Justin, Laporte, Marie-Angelique, Arnaud, Elizabeth, Jaiswal, Pankaj

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A medium-density genetic linkage map of the bovine genome by Barendse, W., Vaiman, D., Kemp, Stephen J., Sugimoto, Y., Armitage, S.M., Williams, J.L., Sun, H.S., Eggen, A., Agaba, Morris, Aleyasin, S.A., Band, M., Bishop, M.D., Buitkamp, J., Byrne, K., Collins, F., Cooper, Laurel D., Coppettiers, W., Denys, B., Drinkwater, R.D., Easterday, K., Elduque, C., Ennis, S., Erhardt, G., Ferretti, L., Flavin, N., Gao, Q., Georges, M., Gurung, R., Harlizius, B., Hawkins, G., Hetzel, J., Hirano, T., Hulme, D., Jorgensen, C., Kessler, M., Kirkpatrick, B.W., Konfortov, B., Kostia, S., Kuhn, C., Lenstra, J.A., Leveziel, H., Lewin, H.A., Leyhe, B., Lil, L., Martin Burriel, I., McGraw, R.A., Miller, J.R., Moody, D.E., Moore, S.S., Nakane, S., Nijman, I.J., Olsaker, I., Pomp, D., Rando, A., Ron, M., Shalom, A., Teale, A.J., Thieven, U., Urquhart, B.G.D., Vage, D.I., Weghe, A. van de, Varvio, S., Velmala, R., Vilkki, J., Weikard, R., Woodside, C., Womack, J.E., Zanotti, M., Zaragoza, P.

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The species-specific crop ontology (Generation Challenge Programme): Application and integration into the reference plant trait ontology to enable data mining on phenotypes. by Arnaud, Elizabeth, Shrestha, R., Kulakow, Peter A., Bakare, M., López Montes, Antonio José, Ofodile, S., Reddy T.P., Prasad, P., Shah, Tushaar, Hash, C.T., Weltzien, Eva, Sissoko, I., Guerrero, Alberto F., Simon, R., Borja Borja, N.F., Ramil, M., Matteis, L., Skofic, M., Hazekamp, T., McLaren, G., Cooper, Laurel D., Jaiswal, P., Menda, N., Nelson, R., Grant, D., Bastow, R., Mueller, L., Rami, J.F.

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Planteome: A resource for common reference ontologies and applications for plant biology by Jaiswal, P., Cooper, Laurel D., Elser, J.L., Meier, A., Laporte, Marie-Angélique, Mungall, C., Smith, B., Johnson, E.K.S., Seymour, M., Preece, J., Xu, X., Kitchen, R.S., Qu, B., Zhang, E., Arnaud, Elizabeth, Carbon, S., Todorovic, S., Stevenson, D.W.

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The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics by Cooper, Laurel D., Meier, A., Laporte, Marie-Angélique, Elser, J.L., Mungall, C., Sinn, B.T., Cavaliere, D., Carbon, S., Dunn, N.A., Smith, B., Qu, B., Preece, J., Zhang, E., Todorovic, S., Gkouto, G., Doonan, J.H., Stevenson, D.W., Arnaud, Elizabeth, Jaiswal, P.

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Developing data interoperability using standards: A wheat community use case by Dzale-Yeumo, E., Alaux, M., Arnaud, Elizabeth, Aubin, S., Baumann, U., Buche, P., Cooper, Laurel D., Cwiek-Kupczynska, H., Davey, R.P., Fulss, R.A., Jonquet, C., Laporte, Marie-Angélique, Larmande, Pierre, Pommier, C., Protonotarios, V., Reverte, C., Shrestha, R., Subirats, I., Venkatesan, A., Whan, A., Quesneville, H.

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