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Wide sampling of natural diversity identifies novel molecular signatures of C4 by Kelly, Steven, Covshoff, Sarah, Wanchana, Samart, Thakur, Vivek, Quick, W. Paul, Wang, Yu, Ludwig, Martha, Bruskiewich, Richard, Fernie, Alisdair R., Sage, Rowan F., Tian, Zhijian, Yan, Zixian, Wang, Jun, Zhang, Yong, Zhu, Xinguang, Ka-Shu Wong, Gane, Hibberd, Julian M.

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Evaluating methods for isolating total rna and predicting the success of sequencing phylogenetically diverse plant transcriptomes by Johnson, Marc T. J., Carpenter, Eric J., Tian, Zhijian, Bruskiewich, Richard, Burris, Jason N., Carrigan, Charlotte T., Chase, Mark W., Clarke, Neil D., Covshoff, Sarah, dePamphilis, Claude W., Edger, Patrick P., Goh, Falicia, Graham, Sean, Greiner, Stephan, Hibberd, Julian M., Jordon-Thaden, Ingrid, Kutchan, Toni M., Leebens-Mack, James, Melkonian, Michael, Miles, Nicholas, Myburg, Henrietta, Patterson, Jordan, Pires, J. Chris, Ralph, Paula, Rolf, Megan, Sage, Rowan F., Soltis, Douglas, Soltis, Pamela, Stevenson, Dennis, Stewart, C. Neal, Surek, Barbara, Thomsen, Christina J. M., Villarreal, Juan Carlos, Wu, Xiaolei, Zhang, Yong, Deyholos, Michael K., Wong, Gane Ka-Shu

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Characterization of statistical features for plant microRNA prediction by Thakur, Vivek, Wanchana, Samart, Xu, Mercedes, Bruskiewich, Richard, Quick, William Paul, Mosig, Axel, Zhu, Xinguang

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Physiological and proteomic responses of rice peduncles to drought stress by Muthurajan, Raveendran, Shobbar, Zahra-Sadat, Jagadish, S.V.K., Bruskiewich, Richard, Ismail, Abdelbagi, Leung, Hei, Bennett, John

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Multifunctional crop trait ontology for breeders' data: field book, annotation, data discovery and semantic enrichment of the literature by Shrestha, Rosemary, Arnaud, Elizabeth, Mauleon, Ramil, Senger, Martin, Davenport, Guy F., Hancock, David, Morrison, Norman, Bruskiewich, Richard, McLaren, Graham

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Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress by Yun, Kil-Young, Park, Myoung Ryoul, Mohanty, Bijayalaxmi, Herath, Venura, Xu, Fuyu, Mauleon, Ramil, Wijaya, Edward, Bajic, Vladimir B., Bruskiewich, Richard, de los Reyes, Benildo G.

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The promoter signatures in rice LEA genes can be used to build a co-expressing LEA gene network by Meier, Stuart, Gehring, Chris, MacPherson, Cameron Ross, Kaur, Mandeep, Maqungo, Monique, Reuben, Sheela, Muyanga, Samson, Shih, Ming-Der, Wei, Fu-Jin, Wanchana, Samart, Mauleon, Ramil, Radovanovic, Aleksandar, Bruskiewich, Richard, Tanaka, Tsuyoshi, Mohanty, Bijayalaxmi, Itoh, Takeshi, Wing, Rod, Gojobori, Takashi, Sasaki, Takuji, Swarup, Sanjay, Hsing, Yue-ie, Bajic, Vladimir B.

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Revealing sequence variation patterns in rice with machine learning methods by Bohnert, Regina, Zeller, Georg, Clark, Richard M., Childs, Kevin L., Ulat, Victor, Stokowski, Renee, Ballinger, Dennis, Frazer, Kelly, Cox, David, Bruskiewich, Richard, Buell, C. Robin, Leach, Jan, Leung, Hei, McNally, Kenneth L., Weigel, Detlef, Rätsch, Gunnar

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Development of a novel data mining tool to find cis-elements in rice gene promoter regions by Doi, Koji, Hosaka, Aeni, Nagata, Toshifumi, Satoh, Kouji, Suzuki, Kohji, Mauleon, Ramil, Mendoza, Michael J., Bruskiewich, Richard, Kikuchi, Shoshi

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Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. by Itoh, Takeshi, Tanaka, Tsuyoshi, Barrero, Roberto A., Yamasaki, Chisato, Fujii, Yasuyuki, Hilton, Phillip B., Antonio, Baltazar A., Aono, Hideo, Apweiler, Rolf, Bruskiewich, Richard, Bureau, Thomas, Burr, Frances, Costa de Oliveira, Antonio, Fuks, Galina, Habara, Takuya, Haberer, Georg, Han, Bin, Harada, Erimi, Hiraki, Aiko T., Hirochika, Hirohiko, Hoen, Douglas, Hokari, Hiroki, Hosokawa, Satomi, Hsing, Yue, Ikawa, Hiroshi, Ikeo, Kazuho, Imanishi, Tadashi, Ito, Yukiyo, Jaiswal, Pankaj, Kanno, Masako, Kawahara, Yoshihiro, Kawamura, Toshiyuki, Kawashima, Hiroaki, Khurana, Jitendra P., Kikuchi, Shoshi, Komatsu, Setsuko, Koyanagi, Kanako O., Kubooka, Hiromi, Lieberherr, Damien, Lin, Yao-Cheng, Lonsdale, David, Matsumoto, Takashi, Matsuya, Akihiro, McCombie, W. Richard, Messing, Joachim, Miyao, Akio, Mulder, Nicola, Nagamura, Yoshiaki, Nam, Jongmin, Namiki, Nobukazu, Numa, Hisataka, Nurimoto, Shin, O’Donovan, Claire, Ohyanagi, Hajime, Okido, Toshihisa, OOta, Satoshi, Osato, Naoki, Palmer, Lance E., Quetier, Francis, Raghuvanshi, Saurabh, Saichi, Naomi, Sakai, Hiroaki, Sakai, Yasumichi, Sakata, Katsumi, Sakurai, Tetsuya, Sato, Fumihiko, Sato, Yoshiharu, Schoof, Heiko, Seki, Motoaki, Shibata, Michie, Shimizu, Yuji, Shinozaki, Kazuo, Shinso, Yuji, Singh, Nagendra K., Smith-White, Brian, Takeda, Jun-ichi, Tanino, Motohiko, Tatusova, Tatiana, Thongjuea, Supat, Todokoro, Fusano, Tsugane, Mika, Tyagi, Akhilesh K., Vanavichit, Apichart, Wang, Aihui, Wing, Rod A., Yamaguchi, Kaori, Yamamoto, Mayu, Yamamoto, Naoyuki, Yu, Yeisoo, Zhang, Hao, Zhao, Qiang, Higo, Kenichi, Burr, Benjamin, Gojobori, Takashi, Sasaki, Takuji

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Generation Challenge Programme (GCP): standards for crop data by Bruskiewich, Richard, Davenport, Guy, Hazekamp, Tom, Metz, Thomas, Ruiz, Manuel, Simon, Reinhard, Masaru Takeya, Lee, Jennifer, Senger, Martin, Mclaren, Graham, Hintum, Theo Van

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Sequencing multiple and diverse rice varieties. Connecting whole-genome variation with phenotypes by McNally, Kenneth L., Bruskiewich, Richard, Mackill, David, Buell, C. Robin, Leach, Jan E., Leung, Hei

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Gene expression microarrays and their application in drought stress research by Kathiresan, Arumugam, Lafitte, H.R., Chen, Junxing, Mansueto, Locedie, Bruskiewich, Richard, Bennett, John

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Chemical- and irradiation-induced mutants of indica rice IR64 for forward and reverse genetics by Wu, Jian-Li, Wu, Chanjian, Lei, Cailin, Baraoidan, Marietta, Bordeos, Alicia, Madamba, Ma. Reina Suzette, Ramos-Pamplona, Marilou, Mauleon, Ramil, Portugal, Arlett, Ulat, Victor Jun, Bruskiewich, Richard, Wang, Guo-Liang, Leach, Jan, Khush, Gurdev, Leung, Hei

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Identification of candidate genes for drought stress tolerance in rice by the integration of a genetic (QTL) map with rice genome physical map by Wang, Xu-sheng, Zhu, Jun, Mansueto, Locedie, Bruskiewich, Richard

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