Authors: Silver JD, Ritchie ME, Smyth GK, Silver, Jeremy D, Ritchie, Matthew E, Smyth, Gordon K

Source: Biostatistics; Apr2009, Vol. 10 Issue 2, p352-363, 12p

Authors: Bakker, ES, Ritchie, ME, Olff, H, Milchunas, DG, Knops, JMH, Bakker, Elisabeth S., Ritchie, Mark E., Milchunas, Daniel G., Knops, Johannes M.H.

Advisors: Waller, Don

URL: https://www.rug.nl/research/portal/en/publications/herbivore-impact-on-grassland-plant-diversity-depends-on-habitat-productivity-and-herbivore-size(558b609d-7c1c-4f50-832b-02d8304ccf2f).html

Authors: You Y; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. you.y@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. you.y@wehi.edu.au., Dong X; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Australia., Wee YK; CSL Limited, Parkville, Australia., Maxwell MJ; CSL Limited, Parkville, Australia., Alhamdoosh M; CSL Limited, Parkville, Australia., Smyth GK; Bioinformatics Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; School of Mathematics and Statistics, The University of Melbourne, Parkville, Australia., Hickey PF; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Australia.; Advanced Technology and Biology Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia., Ritchie ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. mritchie@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. mritchie@wehi.edu.au., Law CW; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. law@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. law@wehi.edu.au.

Source: Genome biology [Genome Biol] 2023 May 12; Vol. 24 (1), pp. 112. Date of Electronic Publication: 2023 May 12.

Publication Type: Published Erratum

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: PubMed not MEDLINE; MEDLINE

Authors: You Y; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. you.y@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. you.y@wehi.edu.au., Dong X; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Australia., Wee YK; CSL Limited, Parkville, Australia., Maxwell MJ; CSL Limited, Parkville, Australia., Alhamdoosh M; CSL Limited, Parkville, Australia., Smyth GK; Bioinformatics Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; School of Mathematics and Statistics, The University of Melbourne, Parkville, Australia., Hickey PF; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Australia.; Advanced Technology and Biology Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia., Ritchie ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. mritchie@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. mritchie@wehi.edu.au., Law CW; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. law@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. law@wehi.edu.au.

Source: Genome biology [Genome Biol] 2023 May 05; Vol. 24 (1), pp. 107. Date of Electronic Publication: 2023 May 05.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Authors: Nahar N; Institute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia., Tram G; Institute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia., Jen FE; Institute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia., Phillips ZN; Institute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia., Weinert LA; Department of Veterinary Medicine, University of Cambridge, Cambridge CB3 0ES, UK., Bossé JT; Section of Paediatric Infectious Disease, Imperial College London, St Mary's Campus, London W2 1PG, UK., Jabbari JS; Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia.; Department of Medical Biology, The University of Melbourne, Parkville 3010, Australia., Gouil Q; Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia.; Department of Medical Biology, The University of Melbourne, Parkville 3010, Australia., Du MRM; Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia., Ritchie ME; Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia.; Department of Medical Biology, The University of Melbourne, Parkville 3010, Australia., Bowden R; Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia.; Department of Medical Biology, The University of Melbourne, Parkville 3010, Australia., Langford PR; Section of Paediatric Infectious Disease, Imperial College London, St Mary's Campus, London W2 1PG, UK., Tucker AW; Department of Veterinary Medicine, University of Cambridge, Cambridge CB3 0ES, UK., Jennings MP; Institute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia., Turni C; Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St. Lucia, Queensland 4072, Australia., Blackall PJ; Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St. Lucia, Queensland 4072, Australia., Atack JM; Institute for Glycomics, Griffith University, Gold Coast, Queensland 4222, Australia.; School of Environment and Science, Griffith University, Gold Coast, Queensland 4222, Australia.

Source: Nucleic acids research [Nucleic Acids Res] 2023 Apr 24; Vol. 51 (7), pp. 3240-3260.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Authors: Tapia Del Fierro A; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., den Hamer B; Department of Human Genetics, Leiden University Medical Center, Leiden, Netherlands., Benetti N; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Jansz N; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Chen K; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Beck T; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia., Vanyai H; Crick Advanced Light Microscopy Facility, The Francis Crick Institute, London, UK., Gurzau AD; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Daxinger L; Queensland Institute of Medical Research, Brisbane, QLD, Australia., Xue S; Department of Biological Sciences, National University of Singapore, Singapore, Singapore.; Institute of Molecular and Cell Biology, A*STAR, Singapore, Singapore., Ly TTN; Department of Biological Sciences, National University of Singapore, Singapore, Singapore.; Institute of Molecular and Cell Biology, A*STAR, Singapore, Singapore., Wanigasuriya I; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Iminitoff M; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Breslin K; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia., Oey H; Queensland Institute of Medical Research, Brisbane, QLD, Australia., Krom YD; Department of Human Genetics, Leiden University Medical Center, Leiden, Netherlands., van der Hoorn D; Department of Human Genetics, Leiden University Medical Center, Leiden, Netherlands., Bouwman LF; Department of Human Genetics, Leiden University Medical Center, Leiden, Netherlands., Johanson TM; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Ritchie ME; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Gouil QA; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., Reversade B; Institute of Molecular and Cell Biology, A*STAR, Singapore, Singapore.; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Prin F; Crick Advanced Light Microscopy Facility, The Francis Crick Institute, London, UK., Mohun T; Crick Advanced Light Microscopy Facility, The Francis Crick Institute, London, UK., van der Maarel SM; Department of Human Genetics, Leiden University Medical Center, Leiden, Netherlands., McGlinn E; EMBL Australia, Monash University, Clayton, VIC, Australia.; Australian Regenerative Medicine Institute, Monash University, Clayton, VIC, Australia., Murphy JM; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia.; Drug Discovery Biology, Monash Institute of Pharmaceutical Sciences, Monash University, Parkville, VIC, Australia., Keniry A; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia., de Greef JC; Department of Human Genetics, Leiden University Medical Center, Leiden, Netherlands., Blewitt ME; The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia. blewitt@wehi.edu.au.; The Department of Medical Biology, University of Melbourne, Melbourne, VIC, Australia. blewitt@wehi.edu.au.

Source: Nature communications [Nat Commun] 2023 Sep 25; Vol. 14 (1), pp. 5466. Date of Electronic Publication: 2023 Sep 25.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

MeSH Terms: Chromatin*/genetics , Muscular Dystrophy, Facioscapulohumeral*/genetics, Animals ; Mice ; Gene Silencing ; Epigenomics ; Genes, Homeobox

Authors: Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G, Behera AK, Gonzalez JM, Hunt T, Lagarde J, Liang CE, Li H, Meade MJ, Amador DAM, Prjibelski AD, Birol I, Bostan H, Brooks AM, Çelik MH, Chen Y, Du MRM, Felton C, Göke J, Hafezqorani S, Herwig R, Kawaji H, Lee J, Li JL, Lienhard M, Mikheenko A, Mulligan D, Nip KM, Pertea M, Ritchie ME, Sim AD, Tang AD, Wan YK, Wang C, Wong BY, Yang C, Barnes I, Berry A, Capella S, Dhillon N, Fernandez-Gonzalez JM, Ferrández-Peral L, Garcia-Reyero N, Goetz S, Hernández-Ferrer C, Kondratova L, Liu T, Martinez-Martin A, Menor C, Mestre-Tomás J, Mudge JM, Panayotova NG, Paniagua A, Repchevsky D, Rouchka E, Saint-John B, Sapena E, Sheynkman L, Smith ML, Suner MM, Takahashi H, Youngworth IA, Carninci P, Denslow ND, Guigó R, Hunter ME, Tilgner HU, Wold BJ, Vollmers C, Frankish A, Au KF, Sheynkman GM, Mortazavi A, Conesa A, Brooks AN

Source: BioRxiv : the preprint server for biology [bioRxiv] 2023 Jul 27. Date of Electronic Publication: 2023 Jul 27.

Publication Type: Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Authors: Teh CE; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia., Peng H; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia., Luo MX; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia., Tan T; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia., Trussart M; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; School of Mathematics and Statistics, The University of Melbourne, Melbourne, VIC, Australia., Howson LJ; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia., Chua CC; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Australian Centre for Blood Diseases, Monash University, Melbourne, VIC, Australia.; Clinical Haematology, The Alfred Hospital, Melbourne, VIC, Australia., Muttiah C; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia.; The Royal Melbourne Hospital, Melbourne, VIC, Australia., Brown F; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia.; Australian Centre for Blood Diseases, Monash University, Melbourne, VIC, Australia., Ritchie ME; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia., Wei AH; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia.; The Royal Melbourne Hospital, Melbourne, VIC, Australia.; Department of Clinical Haematology, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia., Roberts AW; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia.; The Royal Melbourne Hospital, Melbourne, VIC, Australia.; Department of Clinical Haematology, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia., Bryant VL; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia.; The Royal Melbourne Hospital, Melbourne, VIC, Australia., Anderson MA; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia.; Department of Clinical Haematology, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia., Lindeman GJ; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia.; The Royal Melbourne Hospital, Melbourne, VIC, Australia.; Department of Medical Oncology, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia., Huang DCS; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia., Thijssen R; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia., Gray DHD; Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, VIC, Australia.

Source: Blood advances [Blood Adv] 2023 Jun 27; Vol. 7 (12), pp. 2733-2745.

Publication Type: Journal Article

Journal Info: Publisher: American Society of Hematology Country of Publication: United States NLM ID: 101698425 Publication Model: Print Cited Medium: Internet ISSN: 2473-9537 (Electronic) Linking ISSN: 24739529 NLM ISO Abbreviation: Blood Adv Subsets: MEDLINE

MeSH Terms: Leukemia, Lymphocytic, Chronic, B-Cell*/drug therapy , Leukemia, Myeloid, Acute*/drug therapy, Humans ; Killer Cells, Natural ; Bridged Bicyclo Compounds, Heterocyclic/pharmacology ; Bridged Bicyclo Compounds, Heterocyclic/therapeutic use

Authors: Mohanbabu N; Department of Biology, Syracuse University, Syracuse, NY, United States., Veldhuis MP; Institute of Environmental Sciences, Universiteit Leiden, Leiden, The Netherlands., Jung D; Department of Biology, Syracuse University, Syracuse, NY, United States., Ritchie ME; Department of Biology, Syracuse University, Syracuse, NY, United States.

Source: Frontiers in plant science [Front Plant Sci] 2023 Jun 05; Vol. 14, pp. 1185616. Date of Electronic Publication: 2023 Jun 05 (Print Publication: 2023).

Publication Type: Journal Article

Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101568200 Publication Model: eCollection Cited Medium: Print ISSN: 1664-462X (Print) Linking ISSN: 1664462X NLM ISO Abbreviation: Front Plant Sci Subsets: PubMed not MEDLINE

Authors: Keniry A; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia. keniry@wehi.edu.au.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia. keniry@wehi.edu.au., Jansz N; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Gearing LJ; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Wanigasuriya I; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Chen J; Department of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.; Development and Stem Cells Program, Monash Biomedicine Discovery Institute, Clayton, VIC, Australia.; Australian Regenerative Medicine Institute, Monash University, Clayton, Victoria, Australia., Nefzger CM; Department of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.; The University of Queensland, Institute for Molecular Bioscience, St Lucia, QLD, Australia., Hickey PF; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Gouil Q; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Liu J; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Breslin KA; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Iminitoff M; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Beck T; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Tapia Del Fierro A; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Whitehead L; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Jarratt A; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Kinkel SA; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Taberlay PC; School of Medicine, College of Health and Medicine, University of Tasmania, Hobart, TAS, Australia., Willson T; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Pakusch M; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Ritchie ME; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Hilton DJ; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia., Polo JM; Department of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia.; Development and Stem Cells Program, Monash Biomedicine Discovery Institute, Clayton, VIC, Australia.; Australian Regenerative Medicine Institute, Monash University, Clayton, Victoria, Australia., Blewitt ME; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia. blewitt@wehi.edu.au.; The Department of Medical Biology, University of Melbourne, Parkville, VIC, Australia. blewitt@wehi.edu.au.

Source: Nature communications [Nat Commun] 2022 Mar 29; Vol. 13 (1), pp. 1658. Date of Electronic Publication: 2022 Mar 29.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Authors: Subas Satish HP; Blood Cells and Blood Cancer Division, The Walter and Eliza Hall Institute of Medical Research , Melbourne, Australia.; Department of Medical Biology, University of Melbourne, Melbourne, Australia., Zeglinski K; Department of Medical Biology, University of Melbourne, Melbourne, Australia.; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia., Uren RT; Blood Cells and Blood Cancer Division, The Walter and Eliza Hall Institute of Medical Research , Melbourne, Australia.; Department of Medical Biology, University of Melbourne, Melbourne, Australia., Nutt SL; Department of Medical Biology, University of Melbourne, Melbourne, Australia.; Immunology Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia., Ritchie ME; Department of Medical Biology, University of Melbourne, Melbourne, Australia.; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia., Gouil Q; Department of Medical Biology, University of Melbourne, Melbourne, Australia.; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia., Kluck RM; Blood Cells and Blood Cancer Division, The Walter and Eliza Hall Institute of Medical Research , Melbourne, Australia.; Department of Medical Biology, University of Melbourne, Melbourne, Australia.

Source: MAbs [MAbs] 2022 Jan-Dec; Vol. 14 (1), pp. 2106621.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101479829 Publication Model: Print Cited Medium: Internet ISSN: 1942-0870 (Electronic) Linking ISSN: 19420862 NLM ISO Abbreviation: MAbs Subsets: MEDLINE

Authors: Sheerin D; Infectious Diseases and Immune Defence Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC, 3052, Australia. sheerin.d@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia. sheerin.d@wehi.edu.au., Lakay F; Wellcome Centre for Infectious Diseases Research in Africa and Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Observatory, Cape Town, Western Cape, South Africa.; Vuka Research Clinic, University of Cape Town, Department of Medicine, 8 Mzala Street, Khayelitsha, Cape Town, Western Cape, South Africa., Esmail H; Wellcome Centre for Infectious Diseases Research in Africa and Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Observatory, Cape Town, Western Cape, South Africa.; MRC Clinical Trials Unit at University College London, Institute of Clinical Trials and Methodology, London, WC1V 6LJ, UK.; Institute for Global Health, University College London, London, WC1E 6JB, UK., Kinnear C; South African Medical Research Council Genomics Centre, Francie Van Zijl Drive, Parow Valley, Cape Town, Western Cape, South Africa., Sansom B; South African Medical Research Council Genomics Centre, Francie Van Zijl Drive, Parow Valley, Cape Town, Western Cape, South Africa., Glanzmann B; South African Medical Research Council Genomics Centre, Francie Van Zijl Drive, Parow Valley, Cape Town, Western Cape, South Africa., Wilkinson RJ; Wellcome Centre for Infectious Diseases Research in Africa and Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Observatory, Cape Town, Western Cape, South Africa.; Francis Crick Institute, London, NW1 1AT, UK.; Imperial College London, SW7 2AZ, London, UK., Ritchie ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC, 3052, Australia., Coussens AK; Infectious Diseases and Immune Defence Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC, 3052, Australia. coussens.a@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia. coussens.a@wehi.edu.au.; Wellcome Centre for Infectious Diseases Research in Africa and Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Observatory, Cape Town, Western Cape, South Africa. coussens.a@wehi.edu.au.

Source: Scientific reports [Sci Rep] 2023 Feb 01; Vol. 13 (1), pp. 1859. Date of Electronic Publication: 2023 Feb 01.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

MeSH Terms: Gene Expression Profiling*/methods , Hemoglobins*/genetics , RNA*/genetics, Humans ; RNA, Messenger/genetics ; RNA-Seq ; Sequence Analysis, RNA ; Transcriptome ; Computational Biology

Authors: Kriachkov V; Department of Biochemistry and Pharmacology and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, Victoria, Australia., Ormsby AR; Department of Biochemistry and Pharmacology and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, Victoria, Australia., Kusnadi EP; Translational Prostate Cancer Research Laboratory, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia; Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia., McWilliam HEG; Department of Biochemistry and Pharmacology and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, Victoria, Australia; Department of Microbiology and Immunology, Peter Doherty Institute of Infection and Immunity, The University of Melbourne, Melbourne, Victoria, Australia., Mintern JD; Department of Biochemistry and Pharmacology and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, Victoria, Australia., Amarasinghe SL; Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia., Ritchie ME; Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia., Furic L; Translational Prostate Cancer Research Laboratory, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia; Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia; Department of Anatomy and Developmental Biology, Monash Biomedicine Discovery Institute Cancer Program, Monash University, Clayton, Victoria, Australia., Hatters DM; Department of Biochemistry and Pharmacology and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, Victoria, Australia. Electronic address: dhatters@unimelb.edu.au.

Source: The Journal of biological chemistry [J Biol Chem] 2023 Jan; Vol. 299 (1), pp. 102774. Date of Electronic Publication: 2022 Dec 05.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 2985121R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1083-351X (Electronic) Linking ISSN: 00219258 NLM ISO Abbreviation: J Biol Chem Subsets: MEDLINE

MeSH Terms: Amyotrophic Lateral Sclerosis*/genetics , Amyotrophic Lateral Sclerosis*/physiopathology, Humans ; Arginine/metabolism ; C9orf72 Protein/genetics ; C9orf72 Protein/metabolism ; Dipeptides/chemistry ; Ribosomes/genetics ; Ribosomes/metabolism ; Gene Knockout Techniques ; Mutation ; Up-Regulation

Authors: You Y; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. you.y@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. you.y@wehi.edu.au., Tian L; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Australia., Su S; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Australia., Dong X; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Australia., Jabbari JS; Australian Genome Research Facility, Victorian Comprehensive Cancer Centre, Melbourne, Australia.; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at The Peter Doherty Institute for Infection and Immunity, Melbourne, Australia., Hickey PF; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. hickey@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. hickey@wehi.edu.au.; Single-Cell Open Research Endeavour (SCORE), The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. hickey@wehi.edu.au., Ritchie ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, Australia. mritchie@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, Australia. mritchie@wehi.edu.au.; School of Mathematics and Statistics, The University of Melbourne, Parkville, Australia. mritchie@wehi.edu.au.

Source: Genome biology [Genome Biol] 2021 Dec 14; Vol. 22 (1), pp. 339. Date of Electronic Publication: 2021 Dec 14.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Authors: Tian L; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia. tian.l@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia. tian.l@wehi.edu.au., Jabbari JS; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Australian Genome Research Facility, Victorian Comprehensive Cancer Centre, Melbourne, VIC, Australia., Thijssen R; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Gouil Q; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Amarasinghe SL; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Voogd O; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Kariyawasam H; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Du MRM; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Schuster J; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Wang C; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Su S; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Dong X; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Law CW; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Lucattini A; Australian Genome Research Facility, Victorian Comprehensive Cancer Centre, Melbourne, VIC, Australia., Prawer YDJ; Centre for Stem Cell Systems, Department of Anatomy and Neuroscience, The University of Melbourne, Parkville, VIC, Australia., Collar-Fernández C; The Florey Institute of Neuroscience and Mental Health, Parkville, VIC, Australia., Chung JD; Centre for Muscle Research, Department of Physiology, The University of Melbourne, Melbourne, VIC, Australia., Naim T; Centre for Muscle Research, Department of Physiology, The University of Melbourne, Melbourne, VIC, Australia., Chan A; Centre for Muscle Research, Department of Physiology, The University of Melbourne, Melbourne, VIC, Australia., Ly CH; Centre for Muscle Research, Department of Physiology, The University of Melbourne, Melbourne, VIC, Australia.; Present address: Department of Neurology, Stanford University, Stanford, CA, USA., Lynch GS; Centre for Muscle Research, Department of Physiology, The University of Melbourne, Melbourne, VIC, Australia., Ryall JG; Centre for Muscle Research, Department of Physiology, The University of Melbourne, Melbourne, VIC, Australia.; Present address: VOW, North Parramatta, NSW, Australia., Anttila CJA; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia., Peng H; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Anderson MA; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia.; Clinical Haematology, Peter MacCallum Cancer Centre and Royal Melbourne Hospital, Melbourne, VIC, Australia., Flensburg C; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Majewski I; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Roberts AW; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia.; Clinical Haematology, Peter MacCallum Cancer Centre and Royal Melbourne Hospital, Melbourne, VIC, Australia.; Centre for Cancer Research, University of Melbourne, Melbourne, VIC, Australia.; Victorian Comprehensive Cancer Centre, Melbourne, VIC, Australia., Huang DCS; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia., Clark MB; Centre for Stem Cell Systems, Department of Anatomy and Neuroscience, The University of Melbourne, Parkville, VIC, Australia., Ritchie ME; The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia. mritchie@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia. mritchie@wehi.edu.au.

Source: Genome biology [Genome Biol] 2021 Nov 11; Vol. 22 (1), pp. 310. Date of Electronic Publication: 2021 Nov 11.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Authors: Su S; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, Australia., Gouil Q; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, Australia., Blewitt ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, Australia., Cook D; Econometrics & Business Statistics, Monash University, Melbourne, Australia., Hickey PF; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, Australia., Ritchie ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.; Department of Medical Biology, The University of Melbourne, Melbourne, Australia.

Source: PLoS computational biology [PLoS Comput Biol] 2021 Oct 25; Vol. 17 (10), pp. e1009524. Date of Electronic Publication: 2021 Oct 25 (Print Publication: 2021).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Authors: Cao KL; Melbourne Integrative Genomics, School of Mathematics and Statistics, University of Melbourne, Melbourne, Australia. kimanh.lecao@nimelb.edu.au., Abadi AJ; Melbourne Integrative Genomics, School of Mathematics and Statistics, University of Melbourne, Melbourne, Australia., Davis-Marcisak EF; McKusick-Nathans Institute of the Department of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA., Hsu L; Data Science, Dana-Farber Cancer Institute, Boston, MA, USA.; Biostatistics, Harvard TH Chan School of Public Health, Boston, MA, USA., Arora A; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Coullomb A; Centre de Recherches en Cancérologie de Toulouse (INSERM), Université Paul Sabatier III, Toulouse, France., Deshpande A; Cancer Convergence Institute and Division of Quantitative Sciences, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA., Feng Y; Melbourne Integrative Genomics, School of Mathematics and Statistics, University of Melbourne, Melbourne, Australia., Jeganathan P; Department of Mathematics and Statistics, McMaster University, Hamilton, Canada., Loth M; Cancer Convergence Institute and Division of Quantitative Sciences, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA., Meng C; Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), School of Life Sciences, Technical University of Munich, Munich, Germany., Mu W; Department of Biostatistics, UNC, Chapel Hill, NC, USA., Pancaldi V; Centre de Recherches en Cancérologie de Toulouse (INSERM), Université Paul Sabatier III, Toulouse, France.; Barcelona Supercomputing Center, Barcelona, Spain., Sankaran K; Department of Statistics, University of Wisconsin, Madison, WI, USA., Righelli D; Department of Statistical Sciences, University of Padova, Padova, PD, Italy., Singh A; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.; PROOF Centre of Excellence, Vancouver, BC, Canada., Sodicoff JS; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.; Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA., Stein-O'Brien GL; McKusick-Nathans Institute of the Department of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA.; Cancer Convergence Institute and Division of Quantitative Sciences, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.; Department of Neuroscience, Johns Hopkins University, Baltimore, MD, USA.; Kavli Neuroscience Discovery Institute, Johns Hopkins University, Baltimore, MD, USA., Subramanian A; Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Welch JD; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.; Department of Computer Science and Engineering, University of Michigan, Ann Arbor, MI, USA., You Y; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, University of Melbourne, Melbourne, Australia.; Department of Medical Biology, University of Melbourne, Melbourne, Australia., Argelaguet R; Epigenetics Programme, Babraham Institute, Cambridge, CB22 3AT, UK., Carey VJ; Channing Division of Network Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Dries R; Department of Hematology and Oncology, Boston Medical Center, Boston, MA, USA.; Department of Computational Biomedicine, Boston University School of Medicine, Boston, MA, USA.; Center for Regenerative Medicine (CReM), Boston University, Boston, MA, USA., Greene CS; Center for Health AI and Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO, USA., Holmes S; Department of Statistics, Stanford University, Stanford, CA, USA., Love MI; Department of Biostatistics, UNC, Chapel Hill, NC, USA.; Department of Genetics, UNC, Chapel Hill, NC, USA., Ritchie ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, University of Melbourne, Melbourne, Australia.; Department of Medical Biology, University of Melbourne, Melbourne, Australia.; School of Mathematics and Statistics, University of Melbourne, Melbourne, Australia., Yuan GC; Department of Genetics and Genomic Sciences, Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Culhane AC; Data Science, Dana-Farber Cancer Institute, Boston, MA, USA.; Biostatistics, Harvard TH Chan School of Public Health, Boston, MA, USA., Fertig E; Cancer Convergence Institute and Division of Quantitative Sciences, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.; Department of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, USA.; Department of Applied Mathematics and Statistics, Johns Hopkins University Whiting School of Engineering, Baltimore, MD, USA.

Source: Genome biology [Genome Biol] 2021 Aug 25; Vol. 22 (1), pp. 246. Date of Electronic Publication: 2021 Aug 25.

Publication Type: Published Erratum

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: PubMed not MEDLINE; MEDLINE

Authors: Lê Cao KA; Melbourne Integrative Genomics, School of Mathematics and Statistics, University of Melbourne, Melbourne, Australia. kimanh.lecao@unimelb.edu.au., Abadi AJ; Melbourne Integrative Genomics, School of Mathematics and Statistics, University of Melbourne, Melbourne, Australia., Davis-Marcisak EF; McKusick-Nathans Institute of the Department of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA., Hsu L; Data Science, Dana-Farber Cancer Institute, Boston, MA, USA.; Department of Genetics, UNC, Chapel Hill, NC, USA., Arora A; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Coullomb A; Centre de Recherches en Cancérologie de Toulouse (INSERM), Université Paul Sabatier III, Toulouse, France., Deshpande A; Cancer Convergence Institute and Division of Quantitative Sciences, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA., Feng Y; Melbourne Integrative Genomics, School of Mathematics and Statistics, University of Melbourne, Melbourne, Australia., Jeganathan P; Department of Mathematics and Statistics, McMaster University, Hamilton, Canada., Loth M; Cancer Convergence Institute and Division of Quantitative Sciences, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA., Meng C; Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), School of Life Sciences, Technical University of Munich, Munich, Germany., Mu W; Department of Biostatistics, UNC, Chapel Hill, NC, USA., Pancaldi V; Centre de Recherches en Cancérologie de Toulouse (INSERM), Université Paul Sabatier III, Toulouse, France.; Barcelona Supercomputing Center, Barcelona, Spain., Sankaran K; Department of Statistics, University of Wisconsin, Madison, WI, USA., Righelli D; Department of Statistical Sciences, University of Padova, Padova, PD, Italy., Singh A; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.; PROOF Centre of Excellence, Vancouver, BC, Canada., Sodicoff JS; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.; Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA., Stein-O'Brien GL; McKusick-Nathans Institute of the Department of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA.; Cancer Convergence Institute and Division of Quantitative Sciences, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.; Department of Neuroscience, Johns Hopkins University, Baltimore, MD, USA.; Kavli Neuroscience Discovery Institute, Johns Hopkins University, Baltimore, MD, USA., Subramanian A; Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Welch JD; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.; Department of Computer Science and Engineering, University of Michigan, Ann Arbor, MI, USA., You Y; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, University of Melbourne, Melbourne, Australia.; Department of Medical Biology, University of Melbourne, Melbourne, Australia., Argelaguet R; Epigenetics Programme, Babraham Institute, Cambridge, CB22 3AT, UK., Carey VJ; Channing Division of Network Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA., Dries R; Department of Hematology and Oncology, Boston Medical Center, Boston, MA, USA.; Department of Computational Biomedicine, Boston University School of Medicine, Boston, MA, USA.; Center for Regenerative Medicine (CReM), Boston University, Boston, MA, USA., Greene CS; Center for Health AI and Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO, USA., Holmes S; Department of Statistics, Stanford University, Stanford, CA, USA., Love MI; Department of Biostatistics, UNC, Chapel Hill, NC, USA.; Department of Genetics, UNC, Chapel Hill, NC, USA., Ritchie ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, University of Melbourne, Melbourne, Australia.; School of Mathematics and Statistics, University of Melbourne, Melbourne, Australia.; Department of Medical Biology, University of Melbourne, Melbourne, Australia., Yuan GC; Department of Genetics and Genomic Sciences, Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Culhane AC; Data Science, Dana-Farber Cancer Institute, Boston, MA, USA.; Biostatistics, Harvard TH Chan School of Public Health, Boston, MA, USA., Fertig E; Cancer Convergence Institute and Division of Quantitative Sciences, Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.; Department of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, USA.; Department of Applied Mathematics and Statistics, Johns Hopkins University Whiting School of Engineering, Baltimore, MD, USA.

Source: Genome biology [Genome Biol] 2021 Aug 05; Vol. 22 (1), pp. 220. Date of Electronic Publication: 2021 Aug 05.

Publication Type: Letter; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Authors: Lim HJ; Department of Microbiology and Immunology, The University of Melbourne, The Peter Doherty Institute of Infection and Immunity, Melbourne, Victoria, Australia., Wubben JM; Infection and Immunity Program and The Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute Monash University, Clayton, Victoria, Australia., Garcia CP; EMBL Australia Node in Single Molecule Science, School of Medical Sciences, The University of New South Wales, Sydney, Australia., Cruz-Gomez S; Department of Microbiology and Immunology, The University of Melbourne, The Peter Doherty Institute of Infection and Immunity, Melbourne, Victoria, Australia., Deng J; Department of Microbiology and Immunology, The University of Melbourne, The Peter Doherty Institute of Infection and Immunity, Melbourne, Victoria, Australia., Mak JYW; Institute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, Australia., Hachani A; Department of Microbiology and Immunology, The University of Melbourne, The Peter Doherty Institute of Infection and Immunity, Melbourne, Victoria, Australia., Anderson RJ; Ferrier Research Institute, Victoria University of Wellington, Wellington, New Zealand., Painter GF; Ferrier Research Institute, Victoria University of Wellington, Wellington, New Zealand., Goyette J; EMBL Australia Node in Single Molecule Science, School of Medical Sciences, The University of New South Wales, Sydney, Australia., Amarasinghe SL; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Victoria, Australia., Ritchie ME; Epigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, Victoria, Australia., Roquilly A; Department of Microbiology and Immunology, The University of Melbourne, The Peter Doherty Institute of Infection and Immunity, Melbourne, Victoria, Australia.; Nantes Université, CHU Nantes, INSERM, Center for Research in Transplantation and Translational Immunology, UMR 1064; F-44000, Nantes, France., Fairlie DP; Institute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, Australia., Gaus K; EMBL Australia Node in Single Molecule Science, School of Medical Sciences, The University of New South Wales, Sydney, Australia., Rossjohn J; Infection and Immunity Program and The Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute Monash University, Clayton, Victoria, Australia.; Institute of Infection and Immunity, Cardiff University School of Medicine, Heath Park, Cardiff, UK., Villadangos JA; Department of Microbiology and Immunology, The University of Melbourne, The Peter Doherty Institute of Infection and Immunity, Melbourne, Victoria, Australia.; Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria, Australia., McWilliam HEG; Department of Microbiology and Immunology, The University of Melbourne, The Peter Doherty Institute of Infection and Immunity, Melbourne, Victoria, Australia.; Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria, Australia.

Source: The Journal of cell biology [J Cell Biol] 2022 Dec 05; Vol. 221 (12). Date of Electronic Publication: 2022 Sep 21.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Rockefeller University Press Country of Publication: United States NLM ID: 0375356 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1540-8140 (Electronic) Linking ISSN: 00219525 NLM ISO Abbreviation: J Cell Biol Subsets: MEDLINE

MeSH Terms: Antigen Presentation* , Endocytosis* , Histocompatibility Antigens Class I*/genetics , Minor Histocompatibility Antigens*/genetics , Minor Histocompatibility Antigens*/metabolism , Mucosal-Associated Invariant T Cells*/metabolism, Adaptor Protein Complex 2/genetics ; Adaptor Protein Complex 2/metabolism ; Humans ; Lymphocyte Activation ; Tyrosine ; Vitamins

Authors: Kong IY; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Trezise S; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Light A; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Todorovski I; Peter MacCallum Cancer Centre, Melbourne, 3000, VIC, Australia.; Sir Peter MacCallum Department of Oncology, The University of Melbourne, Melbourne, VIC, Australia., Arnau GM; Peter MacCallum Cancer Centre, Melbourne, 3000, VIC, Australia., Gadipally S; Peter MacCallum Cancer Centre, Melbourne, 3000, VIC, Australia., Yoannidis D; Peter MacCallum Cancer Centre, Melbourne, 3000, VIC, Australia., Simpson KJ; Sir Peter MacCallum Department of Oncology, The University of Melbourne, Melbourne, VIC, Australia.; Victorian Centre for Functional Genomics, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia., Dong X; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Whitehead L; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Tempany JC; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Farchione AJ; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Sheikh AA; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia., Groom JR; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Rogers KL; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Herold MJ; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Bryant VL; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Ritchie ME; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Willis SN; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Johnstone RW; Peter MacCallum Cancer Centre, Melbourne, 3000, VIC, Australia.; Sir Peter MacCallum Department of Oncology, The University of Melbourne, Melbourne, VIC, Australia., Hodgkin PD; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Nutt SL; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia., Vervoort SJ; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia. vervoort.s@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia. vervoort.s@wehi.edu.au.; Peter MacCallum Cancer Centre, Melbourne, 3000, VIC, Australia. vervoort.s@wehi.edu.au.; Sir Peter MacCallum Department of Oncology, The University of Melbourne, Melbourne, VIC, Australia. vervoort.s@wehi.edu.au., Hawkins ED; Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, 3052, VIC, Australia. Hawkins.e@wehi.edu.au.; Department of Medical Biology, The University of Melbourne, Parkville, 3010, VIC, Australia. Hawkins.e@wehi.edu.au.

Source: Cell death and differentiation [Cell Death Differ] 2022 Dec; Vol. 29 (12), pp. 2519-2530. Date of Electronic Publication: 2022 Jul 13.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 9437445 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-5403 (Electronic) Linking ISSN: 13509047 NLM ISO Abbreviation: Cell Death Differ Subsets: MEDLINE

MeSH Terms: Epigenesis, Genetic* , B-Lymphocytes*, Animals ; Humans ; Mice ; Basic Helix-Loop-Helix Transcription Factors/genetics ; Cell Differentiation/genetics ; Gene Expression Profiling ; Phenotype ; Polycomb Repressive Complex 2/metabolism