Authors: Tigro H; School of Natural Sciences and Health, Tallinn University, Tallinn, Estonia; Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden., Shimozawa M; Department of Neurobiology, Care Sciences and Society, Division of Neurogeriatrics, Center for Alzheimer Research, Karolinska Institutet, Solna, Sweden., Nilsson P; Department of Neurobiology, Care Sciences and Society, Division of Neurogeriatrics, Center for Alzheimer Research, Karolinska Institutet, Solna, Sweden., Lyashkov A; Biomedical Research Centre, National Institute on Aging, NIH, Baltimore, MD 21224, United States., Khadeer M; Biomedical Research Centre, National Institute on Aging, NIH, Baltimore, MD 21224, United States., Järving I; Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia., Ferrucci L; Biomedical Research Centre, National Institute on Aging, NIH, Baltimore, MD 21224, United States., Shimmo R; School of Natural Sciences and Health, Tallinn University, Tallinn, Estonia., Johansson J; Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden., Moaddel R; Biomedical Research Centre, National Institute on Aging, NIH, Baltimore, MD 21224, United States. Electronic address: moaddelru@mail.nih.gov.

Source: Journal of pharmaceutical and biomedical analysis [J Pharm Biomed Anal] 2023 Aug 05; Vol. 232, pp. 115465. Date of Electronic Publication: 2023 May 18.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Science Country of Publication: England NLM ID: 8309336 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1873-264X (Electronic) Linking ISSN: 07317085 NLM ISO Abbreviation: J Pharm Biomed Anal Subsets: MEDLINE

MeSH Terms: Adaptor Proteins, Signal Transducing* , Protein Binding*, Animals ; Humans ; Mice ; Mice, Inbred C57BL ; Proteomics

Authors: Zhang F; Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha 410083, China., Li M; Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha 410083, China. Electronic address: limin@mail.csu.edu.cn., Zhang J; School of Computer and Information Technology, Xinyang Normal University, Xinyang 464000, China., Shi W; Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha 410083, China., Kurgan L; Department of Computer Science, Virginia Commonwealth University, Richmond, VA 23284, USA. Electronic address: lkurgan@vcu.edu.

Source: Journal of molecular biology [J Mol Biol] 2023 Jul 15; Vol. 435 (14), pp. 167945. Date of Electronic Publication: 2023 Jan 05.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

MeSH Terms: Amino Acids* , Computational Biology*/methods , Protein Binding* , Deep Learning*, Databases, Protein ; Proteome/chemistry ; Protein Conformation

Authors: Cerna-Vargas JP; Department of Biotechnology and Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain.; Centro de Biotecnología y Genómica de Plantas CBGP, Universidad Politécnica de Madrid-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria/CSIC, Parque Científico y Tecnológico de la UPM, Madrid, Spain., Sánchez-Romera B; Scientific Instrumentation Service, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain., Matilla MA; Department of Biotechnology and Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain., Ortega Á; Department of Biochemistry and Molecular Biology B and Immunology, Faculty of Chemistry, University of Murcia, Murcia, Spain., Krell T; Department of Biotechnology and Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Granada, Spain.

Source: Microbial biotechnology [Microb Biotechnol] 2023 Sep; Vol. 16 (9), pp. 1823-1833. Date of Electronic Publication: 2023 Aug 07.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley-Blackwell Country of Publication: United States NLM ID: 101316335 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1751-7915 (Electronic) Linking ISSN: 17517915 NLM ISO Abbreviation: Microb Biotechnol Subsets: MEDLINE

Authors: Jia Q; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Zhang X; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Liu Q; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Li J; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Wang W; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Ma X; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Zhu B; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Li S; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Gong S; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Tian J; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Yuan M; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Zhao Y; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China., Zhou DX; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China. dao-xiu.zhou@universite-paris-saclay.fr.; Institute of Plant Science Paris-Saclay (IPS2), CNRS, INRAE, University Paris-Saclay, 91405, Orsay, France. dao-xiu.zhou@universite-paris-saclay.fr.

Source: Genome biology [Genome Biol] 2023 Aug 30; Vol. 24 (1), pp. 198. Date of Electronic Publication: 2023 Aug 30.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Authors: Liu W; Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, 292 Chengfu Road, Haidian District, 100871, Beijing, P. R. China., Chen L; Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, P. R. China., Yin D; Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, 292 Chengfu Road, Haidian District, 100871, Beijing, P. R. China., Yang Z; Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, 292 Chengfu Road, Haidian District, 100871, Beijing, P. R. China., Feng J; Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, 292 Chengfu Road, Haidian District, 100871, Beijing, P. R. China., Sun Q; Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, 292 Chengfu Road, Haidian District, 100871, Beijing, P. R. China. qsun2015@pku.edu.cn., Lai L; Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, 292 Chengfu Road, Haidian District, 100871, Beijing, P. R. China. lhlai@pku.edu.cn.; Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, P. R. China. lhlai@pku.edu.cn.; Center for Quantitative Biology, Academy for Advanced Interdisciplinary Studies, Peking University, 100871, Beijing, P. R. China. lhlai@pku.edu.cn., Guo X; Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, 292 Chengfu Road, Haidian District, 100871, Beijing, P. R. China. guoxf@pku.edu.cn.; Center of Single-Molecule Sciences, Institute of Modern Optics, Frontiers Science Center for New Organic Matter, College of Electronic Information and Optical Engineering, Nankai University, 38 Tongyan Road, Jinnan District, 300350, Tianjin, P. R. China. guoxf@pku.edu.cn.; National Biomedical Imaging Center, Peking University, Beijing, 100871, P. R. China. guoxf@pku.edu.cn.

Source: Nature communications [Nat Commun] 2023 Aug 25; Vol. 14 (1), pp. 5203. Date of Electronic Publication: 2023 Aug 25.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Authors: Kang Y; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea., Han YG; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea., Khim KW; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea., Choi WG; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea., Ju MK; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea., Park K; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea., Shin KJ; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea., Chae YC; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea., Choi JH; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea.; Institute of Basic Science Center for Genomic Integrity, Ulsan 44919, Republic of Korea., Kim H; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea.; Institute of Basic Science Center for Genomic Integrity, Ulsan 44919, Republic of Korea., Lee JY; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea.; Institute of Basic Science Center for Genomic Integrity, Ulsan 44919, Republic of Korea.

Source: Nucleic acids research [Nucleic Acids Res] 2023 Aug 25; Vol. 51 (15), pp. 7936-7950.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Authors: Freda I; Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza, University of Rome, Rome 00185, Italy., Exertier C; Institute of Molecular Biology and Pathology, National Research Council, Rome 00185, Italy., Barile A; Institute of Molecular Biology and Pathology, National Research Council, Rome 00185, Italy., Chaves-Sanjuan A; Department of Biosciences, Pediatric Clinical Research Center Romeo ed Enrica Invernizzi and NOLIMITS, University of Milano, Milano 20133, Italy., Vega MV; School of Biochemistry, University of Bristol, University Walk, BS8 1TD Bristol, UK., Isupov MN; Geoffrey Pope Building, University of Exeter, Stocker Road, Exeter EX4 4QD, UK., Harmer NJ; Living Systems Institute, University of Exeter, Stocker Road, Exeter EX4 4QD, UK., Gugole E; Institute of Molecular Biology and Pathology, National Research Council, Rome 00185, Italy., Swuec P; Cryo-Electron Microscopy Core Facility, Human Technopole, Milano 20157, Italy., Bolognesi M; Department of Biosciences, Pediatric Clinical Research Center Romeo ed Enrica Invernizzi and NOLIMITS, University of Milano, Milano 20133, Italy., Scipioni A; Department of Chemistry, Sapienza, University of Rome, Rome 00185, Italy., Savino C; Institute of Molecular Biology and Pathology, National Research Council, Rome 00185, Italy., Di Salvo ML; Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza, University of Rome, Rome 00185, Italy., Contestabile R; Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza, University of Rome, Rome 00185, Italy.; Istituto Pasteur-Fondazione Cenci Bolognetti, Sapienza, University of Rome, Rome 00185, Italy., Vallone B; Department of Biochemical Sciences 'A. Rossi Fanelli', Sapienza, University of Rome, Rome 00185, Italy.; Institute of Molecular Biology and Pathology, National Research Council, Rome 00185, Italy., Tramonti A; Institute of Molecular Biology and Pathology, National Research Council, Rome 00185, Italy., Montemiglio LC; Institute of Molecular Biology and Pathology, National Research Council, Rome 00185, Italy.

Source: Nucleic acids research [Nucleic Acids Res] 2023 Aug 25; Vol. 51 (15), pp. 8237-8254.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Authors: Suwita JP; Department of Biochemistry, University of Colorado Boulder, Boulder, CO, United States of America., Voong CK; Department of Biochemistry, University of Colorado Boulder, Boulder, CO, United States of America., Ly E; Department of Biochemistry, University of Colorado Boulder, Boulder, CO, United States of America., Goodrich JA; Department of Biochemistry, University of Colorado Boulder, Boulder, CO, United States of America., Kugel JF; Department of Biochemistry, University of Colorado Boulder, Boulder, CO, United States of America.

Source: PloS one [PLoS One] 2023 Aug 15; Vol. 18 (8), pp. e0286193. Date of Electronic Publication: 2023 Aug 15 (Print Publication: 2023).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Authors: Huisman BD; Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.; Department of Biological Engineering, MIT, Cambridge, MA, USA., Guan N; Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.; Department of Biological Engineering, MIT, Cambridge, MA, USA., Rückert T; Innate Immunity, Deutsches Rheuma-Forschungszentrum Berlin (DRFZ), ein Leibniz Institut, Berlin, Germany., Garner L; Centre for Immuno-Oncology, Old Road Campus Research Building, Nuffield Department of Medicine, University of Oxford, Oxford, UK., Singh NK; Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.; Ragon Institute of MGH, MIT, and Harvard, Cambridge, MA, USA., McMichael AJ; Centre for Immuno-Oncology, Old Road Campus Research Building, Nuffield Department of Medicine, University of Oxford, Oxford, UK., Gillespie GM; Centre for Immuno-Oncology, Old Road Campus Research Building, Nuffield Department of Medicine, University of Oxford, Oxford, UK., Romagnani C; Innate Immunity, Deutsches Rheuma-Forschungszentrum Berlin (DRFZ), ein Leibniz Institut, Berlin, Germany.; Charité - Universitätsmedizin Berlin, Berlin, Germany., Birnbaum ME; Koch Institute for Integrative Cancer Research, Cambridge, MA, USA. mbirnb@mit.edu.; Department of Biological Engineering, MIT, Cambridge, MA, USA. mbirnb@mit.edu.; Ragon Institute of MGH, MIT, and Harvard, Cambridge, MA, USA. mbirnb@mit.edu.

Source: Nature communications [Nat Commun] 2023 Aug 09; Vol. 14 (1), pp. 4809. Date of Electronic Publication: 2023 Aug 09.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Authors: Niu J; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.; CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, Shanghai, 200031, China.; University of Chinese Academy of Sciences, Beijing, 100049, China., Wang Q; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China., Zhao W; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China., Meng B; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China., Xu Y; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China., Zhang X; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China., Feng Y; State Key Laboratory for Infectious Disease Prevention and Control, National Center for AIDS/STD Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China., Qi Q; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China., Hao Y; State Key Laboratory for Infectious Disease Prevention and Control, National Center for AIDS/STD Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China., Zhang X; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China., Liu Y; State Key Laboratory for Infectious Disease Prevention and Control, National Center for AIDS/STD Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China., Xiang J; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China., Shao Y; State Key Laboratory for Infectious Disease Prevention and Control, National Center for AIDS/STD Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China. shaoyiming@cpl.ac.cn.; Changping Laboratory, Beijing, 102206, China. shaoyiming@cpl.ac.cn., Yang B; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China. yangbei@shanghaitech.edu.cn.; Shanghai Clinical Research and Trial Center, Shanghai, 201210, China. yangbei@shanghaitech.edu.cn.

Source: Nature communications [Nat Commun] 2023 Aug 04; Vol. 14 (1), pp. 4676. Date of Electronic Publication: 2023 Aug 04.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Authors: Jung YH; Department of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA., Wang HV; Department of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA., Ali S; Department of Basic Sciences, Loma Linda University School of Medicine, Loma Linda, CA, 92350, USA., Corces VG; Department of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA., Kremsky I; Department of Basic Sciences, Loma Linda University School of Medicine, Loma Linda, CA, 92350, USA. ikremsky@llu.edu.; Center for Genomics, Loma Linda University School of Medicine, Loma Linda, CA, USA. ikremsky@llu.edu.

Source: BMC genomics [BMC Genomics] 2023 Aug 03; Vol. 24 (1), pp. 437. Date of Electronic Publication: 2023 Aug 03.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

Authors: Abdel-Rehim A; Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB3 0AS, United Kingdom., Orhobor O; The National Institute of Agricultural Botany, Cambridge CB3 0LE, United Kingdom., Hang L; Department of Mathematics, University College London, London WC1H 0AY, United Kingdom., Ni H; Department of Mathematics, University College London, London WC1H 0AY, United Kingdom.; The Alan Turing Institute, London NW1 2DB, United Kingdom., King RD; Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB3 0AS, United Kingdom.; The Alan Turing Institute, London NW1 2DB, United Kingdom.; Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg 412 96, Sweden.; Department of Computer Science and Engineering, Chalmers University of Technology, Gothenburg 412 96, Sweden.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Aug 01; Vol. 39 (8).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Authors: Myronov A; Faculty of Mathematics and Information Science, Warsaw University of Technology, Warsaw, Poland.; Ardigen, Krakow, Poland., Mazzocco G; Ardigen, Krakow, Poland., Król P; Ardigen, Krakow, Poland., Plewczynski D; Faculty of Mathematics and Information Science, Warsaw University of Technology, Warsaw, Poland.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Aug 01; Vol. 39 (8).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Authors: Hartout P; Discovery Sciences, Novartis Institutes for Biomedical Research, Basel 4056, Switzerland., Počuča B; NIBR Research Informatics, Novartis Institutes for Biomedical Research, Basel 4056, Switzerland., Méndez-García C; Discovery Sciences, Novartis Institutes for Biomedical Research, Basel 4056, Switzerland., Schleberger C; Discovery Sciences, Novartis Institutes for Biomedical Research, Basel 4056, Switzerland.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Aug 01; Vol. 39 (8).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Authors: Yang M; College of Computer Science and Software Engineering, Shenzhen University, Shenzhen 518060, China., Huang ZA; Research Office, City University of Hong Kong (Dongguan), Dongguan 523000, China., Zhou W; College of Computer Science and Software Engineering, Shenzhen University, Shenzhen 518060, China., Ji J; College of Computer Science and Software Engineering, Shenzhen University, Shenzhen 518060, China., Zhang J; College of Computer Science and Software Engineering, Shenzhen University, Shenzhen 518060, China., He S; School of Computer Science, University of Birmingham, Birmingham B15 2TT, United Kingdom., Zhu Z; College of Computer Science and Software Engineering, Shenzhen University, Shenzhen 518060, China.; National Engineering Laboratory for Big Data System Computing Technology, Shenzhen University, Shenzhen 518060, China.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Aug 01; Vol. 39 (8).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Authors: Oyedele AK; Computational Biology/Drug Discovery Laboratory, Department of Biochemistry, Ladoke Akintola University of Technology, Ogbomoso, Nigeria.; Department of Chemistry, University of New Haven, West Haven, CT, USA., Ogunlana AT; Computational Biology/Drug Discovery Laboratory, Department of Biochemistry, Ladoke Akintola University of Technology, Ogbomoso, Nigeria., Boyenle ID; Computational Biology/Drug Discovery Laboratory, Department of Biochemistry, Ladoke Akintola University of Technology, Ogbomoso, Nigeria. idboyenle@student.lautech.edu.ng.; Department of Chemistry and Biochemsitry, University of Maryland, Maryland, USA. idboyenle@student.lautech.edu.ng.; College of Health Sciences, Crescent University, Abeokuta, Nigeria. idboyenle@student.lautech.edu.ng., Adeyemi AO; Department of Medical Laboratory Technology, Lagos State College of Health, Lagos, Nigeria., Rita TO; Department of Medical Laboratory Technology, Lagos State College of Health, Lagos, Nigeria., Adelusi TI; Computational Biology/Drug Discovery Laboratory, Department of Biochemistry, Ladoke Akintola University of Technology, Ogbomoso, Nigeria., Abdul-Hammed M; Department of Pure and Applied Chemistry, Ladoke Akintola University of Technology, Ogbomoso, Nigeria., Elegbeleye OE; Computational Biology/Drug Discovery Laboratory, Department of Biochemistry, Ladoke Akintola University of Technology, Ogbomoso, Nigeria., Odunitan TT; Department of Biochemistry, Ladoke Akintola University of Technology, Ogbomoso, Nigeria.

Source: Molecular diversity [Mol Divers] 2023 Aug; Vol. 27 (4), pp. 1879-1903. Date of Electronic Publication: 2022 Sep 04.

Publication Type: Journal Article; Review

Journal Info: Publisher: ESCOM Science Publishers Country of Publication: Netherlands NLM ID: 9516534 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1573-501X (Electronic) Linking ISSN: 13811991 NLM ISO Abbreviation: Mol Divers Subsets: MEDLINE

Authors: Persico M; Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano, Naples, Italy., Sessa R; Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, Via Sergio Pansini, Naples, Italy., Cesaro E; Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, Via Sergio Pansini, Naples, Italy., Dini I; Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano, Naples, Italy., Costanzo P; Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, Via Sergio Pansini, Naples, Italy., Ritieni A; Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano, Naples, Italy. alberto.ritieni@unina.it.; Staff of UNESCO Chair On Health Education and Sustainable Development, University of Naples Federico II, Naples, Italy. alberto.ritieni@unina.it., Fattorusso C; Department of Pharmacy, University of Naples Federico II, Via Domenico Montesano, Naples, Italy., Grosso M; Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, Via Sergio Pansini, Naples, Italy.

Source: Cell biology and toxicology [Cell Biol Toxicol] 2023 Aug; Vol. 39 (4), pp. 1275-1295. Date of Electronic Publication: 2022 Sep 06.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Springer Country of Publication: Switzerland NLM ID: 8506639 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1573-6822 (Electronic) Linking ISSN: 07422091 NLM ISO Abbreviation: Cell Biol Toxicol Subsets: MEDLINE

Authors: Xia Y; Institute of Image Processing and Pattern Recognition, Shanghai Jiao Tong University, and Key Laboratory of System Control and Information Processing, Ministry of Education of China, Shanghai 200240, China., Pan X; Institute of Image Processing and Pattern Recognition, Shanghai Jiao Tong University, and Key Laboratory of System Control and Information Processing, Ministry of Education of China, Shanghai 200240, China. Electronic address: 2008xypan@sjtu.edu.cn., Shen HB; Institute of Image Processing and Pattern Recognition, Shanghai Jiao Tong University, and Key Laboratory of System Control and Information Processing, Ministry of Education of China, Shanghai 200240, China. Electronic address: hbshen@sjtu.edu.cn.

Source: Journal of molecular biology [J Mol Biol] 2023 Jul 01; Vol. 435 (13), pp. 168091. Date of Electronic Publication: 2023 Apr 12.

Publication Type: Dataset; Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

MeSH Terms: Protein Binding*, Humans ; Binding Sites ; Ligands ; Neural Networks, Computer ; SARS-CoV-2 ; Viral Proteins

Authors: Gainza P; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.; Monte Rosa Therapeutics, Basel, Switzerland., Wehrle S; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Van Hall-Beauvais A; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Marchand A; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Scheck A; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Harteveld Z; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Buckley S; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Ni D; Laboratory of Biological Electron Microscopy, Institute of Physics, School of Basic Science, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Department of Fundamental Microbiology, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland., Tan S; CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China., Sverrisson F; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Goverde C; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Turelli P; Laboratory of Virology and Genetics, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Raclot C; Laboratory of Virology and Genetics, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Teslenko A; Laboratory of Biophysical Chemistry of Macromolecules, School of Basic Sciences, Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Pacesa M; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Rosset S; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Georgeon S; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Marsden J; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Petruzzella A; Swiss Institute for Experimental Cancer Research, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Liu K; CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China., Xu Z; CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China., Chai Y; CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China., Han P; CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China., Gao GF; CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China., Oricchio E; Swiss Institute for Experimental Cancer Research, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Fierz B; Laboratory of Biophysical Chemistry of Macromolecules, School of Basic Sciences, Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Trono D; Laboratory of Virology and Genetics, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Stahlberg H; Laboratory of Biological Electron Microscopy, Institute of Physics, School of Basic Science, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Department of Fundamental Microbiology, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland., Bronstein M; Department of Computer Science, University of Oxford, Oxford, UK. michael.bronstein@cs.ox.ac.uk., Correia BE; Laboratory of Protein Design and Immunoengineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland. bruno.correia@epfl.ch.; Swiss Institute of Bioinformatics, Lausanne, Switzerland. bruno.correia@epfl.ch.

Source: Nature [Nature] 2023 May; Vol. 617 (7959), pp. 176-184. Date of Electronic Publication: 2023 Apr 26.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

MeSH Terms: Proteins*/chemistry , Proteins*/metabolism , Protein Binding* , Deep Learning* , Computer Simulation*, Humans ; Proteomics ; Protein Interaction Maps ; Binding Sites ; Synthetic Biology

Authors: Lehmann S; Integrated Systems and Photonics, Faculty of Engineering, Kiel University, 24118 Kiel, Germany., Kraft FA; Integrated Systems and Photonics, Faculty of Engineering, Kiel University, 24118 Kiel, Germany., Gerken M; Integrated Systems and Photonics, Faculty of Engineering, Kiel University, 24118 Kiel, Germany.

Source: Sensors (Basel, Switzerland) [Sensors (Basel)] 2023 Jun 16; Vol. 23 (12). Date of Electronic Publication: 2023 Jun 16.

Publication Type: Journal Article

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101204366 Publication Model: Electronic Cited Medium: Internet ISSN: 1424-8220 (Electronic) Linking ISSN: 14248220 NLM ISO Abbreviation: Sensors (Basel) Subsets: MEDLINE