Authors: Martin W, Lewis NE, Caldwell LR, Vicenzi A, White K

Source: AJN American Journal of Nursing; Feb98, Vol. 98 Issue 2, p14-14, 1p

Authors: Kenefake D; Texas A &M Energy Institute, Texas A &M University, College Station, TX, 77843, USA.; Department of Chemical Engineering, Texas A &M University, College Station, TX, 77843, USA., Armingol E; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, CA, 92093, USA., Lewis NE; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, CA, 92093, USA., Pistikopoulos EN; Texas A &M Energy Institute, Texas A &M University, College Station, TX, 77843, USA. stratos@tamu.edu.; Department of Chemical Engineering, Texas A &M University, College Station, TX, 77843, USA. stratos@tamu.edu.

Source: BMC bioinformatics [BMC Bioinformatics] 2022 Dec 19; Vol. 23 (1), pp. 550. Date of Electronic Publication: 2022 Dec 19.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

Authors: Armingol E; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, California, United States of America.; Department of Pediatrics, University of California, San Diego, La Jolla, California, United States of America., Ghaddar A; Department of Biology, University of Virginia, Charlottesville, Virginia, United States of America., Joshi CJ; Department of Pediatrics, University of California, San Diego, La Jolla, California, United States of America., Baghdassarian H; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, California, United States of America.; Department of Pediatrics, University of California, San Diego, La Jolla, California, United States of America., Shamie I; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, California, United States of America.; Department of Pediatrics, University of California, San Diego, La Jolla, California, United States of America., Chan J; Poway High School, Poway, California, United States of America., Her HL; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, California, United States of America., Berhanu S; Department of Biology, University of Virginia, Charlottesville, Virginia, United States of America., Dar A; Department of Biology, University of Virginia, Charlottesville, Virginia, United States of America., Rodriguez-Armstrong F; Department of Biology, University of Virginia, Charlottesville, Virginia, United States of America., Yang O; Department of Biology, University of Virginia, Charlottesville, Virginia, United States of America., O'Rourke EJ; Department of Biology, University of Virginia, Charlottesville, Virginia, United States of America.; Department of Cell Biology, School of Medicine of University of Virginia, Charlottesville, Virginia, United States of America., Lewis NE; Department of Pediatrics, University of California, San Diego, La Jolla, California, United States of America.; Department of Bioengineering, University of California, San Diego, La Jolla, California, United States of America.

Source: PLoS computational biology [PLoS Comput Biol] 2022 Nov 17; Vol. 18 (11), pp. e1010715. Date of Electronic Publication: 2022 Nov 17 (Print Publication: 2022).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Authors: Azadian S; Bioinformatics and Computational Omics Lab (BioCOOL), Department of Biophysics, Faculty of Biological Sciences, Tarbiat Modares University (TMU), Tehran, Iran., Doustmohammadi A; Department of Molecular Virology, Pasteur Institute of Iran, Tehran, Iran., Naseri M; Institute of Infectious Diseases and Infection Control, Jena University Hospital, Jena, Germany., Khodarahmi M; Bahar Medical Centre, Karaj, Iran., Arab SS; Department of Biophysics, Faculty of Biological Sciences, Tarbiat Modares University (TMU), Tehran, Iran., Yazdanifar M; Department of Pediatrics, Stem Cell Transplantation and Regenerative Medicine, Stanford University School of Medicine, Palo Alto, California, USA., Zahiri J; Department of Neuroscience, University of California San Diego, San Diego, California, USA.; Department of Pediatrics, La Jolla, California, USA., Lewis NE; Department of Pediatrics, La Jolla, California, USA.; Department of Bioengineering, University of California San Diego, La Jolla, California, USA.

Source: Biotechnology and bioengineering [Biotechnol Bioeng] 2023 May 25. Date of Electronic Publication: 2023 May 25.

Publication Type: Journal Article

Journal Info: Publisher: Wiley Country of Publication: United States NLM ID: 7502021 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0290 (Electronic) Linking ISSN: 00063592 NLM ISO Abbreviation: Biotechnol Bioeng Subsets: MEDLINE

Authors: Masson HO, Samoudi M, Robinson CM, Kuo CC, Weiss L, Ud Doha KS, Campos A, Tejwani V, Dahodwala H, Menard P, Voldborg BG, Sharfstein ST, Lewis NE

Source: BioRxiv : the preprint server for biology [bioRxiv] 2023 May 07. Date of Electronic Publication: 2023 May 07.

Publication Type: Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Authors: Baghdassarian H, Dimitrov D, Armingol E, Saez-Rodriguez J, Lewis NE

Source: BioRxiv : the preprint server for biology [bioRxiv] 2023 Apr 30. Date of Electronic Publication: 2023 Apr 30.

Publication Type: Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Authors: Liang C; Department of Pediatrics, University of California, San Diego, La Jolla, San Diego, CA 92130, USA; Department of Bioengineering, University of California, San Diego, La Jolla, San Diego, CA 92130, USA., Chiang AWT; Department of Pediatrics, University of California, San Diego, La Jolla, San Diego, CA 92130, USA. Electronic address: austin.chiang@gmail.com., Lewis NE; Department of Pediatrics, University of California, San Diego, La Jolla, San Diego, CA 92130, USA; Department of Bioengineering, University of California, San Diego, La Jolla, San Diego, CA 92130, USA. Electronic address: nlewisres@ucsd.edu.

Source: STAR protocols [STAR Protoc] 2023 Apr 21; Vol. 4 (2), pp. 102244. Date of Electronic Publication: 2023 Apr 21.

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101769501 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2666-1667 (Electronic) Linking ISSN: 26661667 NLM ISO Abbreviation: STAR Protoc Subsets: MEDLINE

Authors: Johnson WT; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Ganesan N; Memorial Sloan Kettering Cancer Center, New York, New York, United States., Epstein-Peterson ZD; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Moskowitz AJ; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Stuver RN; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Maccaro CR; Memorial Sloan Kettering Cancer Center, New York, New York, United States., Galasso N; Memorial Sloan Kettering Cancer Center, New York, New York, United States., Chang T; Memorial Sloan Kettering Cancer Center, New York, New York, United States., Khan N; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Aypar U; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Lewis NE; Memorial Sloan Kettering Cancer Center, New York, New York, United States., Zelenetz AD; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Palomba ML; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Matasar MJ; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Noy A; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Hamilton AM; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Hamlin PA; 2Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Caron PC; 2Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Straus DJ; Department of Medicine, Weill Cornell Medical College, Cornell University,, United States., Intlekofer AM; Department of Medicine, Weill Cornell Medical College, Cornell University,, United States., Batlevi CL; Memorial Sloan Kettering Cancer Center, New York, New York, United States., Kumar A; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Owens CN; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Sauter CS; Department of Hematology and Oncology, Cleveland Clinic, United States., Falchi L; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Lue JK; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Vardhana SA; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Salles GA; Department of Medicine, Weill Cornell Medical College, Cornell University. Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, United States., Dogan A; Department of Medicine, Weill Cornell Medical College, Cornell University, United States., Schultz ND; Human Oncology and Pathogenesis Program, United States., Arcila ME; Human Oncology and Pathogenesis Program, United States., Horwitz SM; Department of Medicine, Weill Cornell Medical College, United States.

Source: Blood advances [Blood Adv] 2023 Apr 20. Date of Electronic Publication: 2023 Apr 20.

Publication Type: Journal Article

Journal Info: Publisher: American Society of Hematology Country of Publication: United States NLM ID: 101698425 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2473-9537 (Electronic) Linking ISSN: 24739529 NLM ISO Abbreviation: Blood Adv Subsets: MEDLINE

Authors: Masson HO; Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA., Karottki KJC; Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA., Tat J; Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA; Amgen Inc., Thousand Oaks, CA, USA., Hefzi H; Biogen, Inc., Cambridge, MA, USA. Electronic address: hooman.hefzi@biogen.com., Lewis NE; Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA; Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA. Electronic address: nlewisres@ucsd.edu.

Source: Trends in biotechnology [Trends Biotechnol] 2023 Apr 14. Date of Electronic Publication: 2023 Apr 14.

Publication Type: Journal Article; Review

Journal Info: Publisher: Elsevier Science Publishers Country of Publication: England NLM ID: 8310903 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-3096 (Electronic) Linking ISSN: 01677799 NLM ISO Abbreviation: Trends Biotechnol Subsets: MEDLINE

Authors: Lewis NE; Hematopathology Service, Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, 1275 York Avenue, New York, NY, 10065, USA. lewisn1@mskcc.org., Sardana R; Hematopathology Service, Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, 1275 York Avenue, New York, NY, 10065, USA., Dogan A; Hematopathology Service, Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, 1275 York Avenue, New York, NY, 10065, USA.

Source: International journal of hematology [Int J Hematol] 2023 Apr; Vol. 117 (4), pp. 475-491. Date of Electronic Publication: 2023 Jan 13.

Publication Type: Journal Article; Review

Journal Info: Publisher: Springer Japan Country of Publication: Japan NLM ID: 9111627 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1865-3774 (Electronic) Linking ISSN: 09255710 NLM ISO Abbreviation: Int J Hematol Subsets: MEDLINE

MeSH Terms: Lymphoma*/pathology , Lymphoma, T-Cell, Peripheral*/diagnosis, Humans ; T-Lymphocytes/pathology ; Killer Cells, Natural/pathology ; World Health Organization ; Molecular Biology

Authors: Ha TK; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark., Òdena A; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark., Karottki KJC; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.; Departments of Pediatrics and Bioengineering, University of California, San Diego, California, USA., Kim CL; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark., Hefzi H; Departments of Pediatrics and Bioengineering, University of California, San Diego, California, USA., Lee GM; Department of Biological Sciences, KAIST, Daejeon, Republic of Korea., Faustrup Kildegaard H; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark., Nielsen LK; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.; ARC Training Centre for Biopharmaceutical Innovation Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, Queensland, Australia., Grav LM; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.; Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark., Lewis NE; Departments of Pediatrics and Bioengineering, University of California, San Diego, California, USA.

Source: Biotechnology and bioengineering [Biotechnol Bioeng] 2023 Apr; Vol. 120 (4), pp. 1159-1166. Date of Electronic Publication: 2023 Jan 03.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley Country of Publication: United States NLM ID: 7502021 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0290 (Electronic) Linking ISSN: 00063592 NLM ISO Abbreviation: Biotechnol Bioeng Subsets: MEDLINE

MeSH Terms: Glutamate-Ammonia Ligase*/genetics , Glutamate-Ammonia Ligase*/metabolism , Asparaginase*, Cricetinae ; Animals ; Cricetulus ; CHO Cells ; Glutamine/metabolism ; Glutamine/pharmacology ; Etanercept ; Recombinant Proteins/genetics

Authors: Zhang Y; Department of Pediatrics, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA; Department of Biostatistics, Harvard T.H. Chan School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA; Department of Bioengineering, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA., Krishnan S; Department of Pediatrics, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA., Bao B; Department of Pediatrics, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA; Department of Bioengineering, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA., Chiang AWT; Department of Pediatrics, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA., Sorrentino JT; Department of Pediatrics, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA; Department of Bioengineering, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA., Schinn SM; Department of Pediatrics, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA; Department of Bioengineering, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA., Kellman BP; Department of Pediatrics, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA; Department of Bioengineering, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA; Augment Biologics, 9450 SW Gemini Dr. #46664, Beaverton, OR 97008, USA. Electronic address: benjamin.kellman@gmail.com., Lewis NE; Department of Pediatrics, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA; Department of Bioengineering, University of California, San Diego, 9500 Gilman Drive MC 0760, La Jolla, CA 92093, USA. Electronic address: nlewisres@ucsd.edu.

Source: STAR protocols [STAR Protoc] 2023 Mar 13; Vol. 4 (2), pp. 102162. Date of Electronic Publication: 2023 Mar 13.

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101769501 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2666-1667 (Electronic) Linking ISSN: 26661667 NLM ISO Abbreviation: STAR Protoc Subsets: MEDLINE

Authors: Kotidis P; Sargent Centre for Process Systems Engineering, Department of Chemical Engineering, Imperial College London, London, SW7 2AZ, UK. Electronic address: p.kotidis17@imperial.ac.uk., Donini R; Department of Life Sciences, Imperial College London, London, SW7 2AZ, UK., Arnsdorf J; National Biologics Facility, Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark., Hansen AH; National Biologics Facility, Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark., Voldborg BGR; National Biologics Facility, Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark., Chiang AWT; Department of Pediatrics, University of California, San Diego, CA, 92093, USA., Haslam SM; Department of Life Sciences, Imperial College London, London, SW7 2AZ, UK., Betenbaugh M; Department of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA., Jimenez Del Val I; School of Chemical & Bioprocess Engineering, University College, Dublin, D04 V1W8, Ireland., Lewis NE; Department of Pediatrics, University of California, San Diego, CA, 92093, USA; Department of Bioengineering, University of California, San Diego, CA, 92093, USA., Krambeck F; ReacTech Inc., 810 Cameron Street, Alexandria, VA, 22314, USA., Kontoravdi C; Sargent Centre for Process Systems Engineering, Department of Chemical Engineering, Imperial College London, London, SW7 2AZ, UK. Electronic address: cleo.kontoravdi@imperial.ac.uk.

Source: Metabolic engineering [Metab Eng] 2023 Mar; Vol. 76, pp. 87-96. Date of Electronic Publication: 2023 Jan 04.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Academic Press Country of Publication: Belgium NLM ID: 9815657 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-7184 (Electronic) Linking ISSN: 10967176 NLM ISO Abbreviation: Metab Eng Subsets: MEDLINE

MeSH Terms: Glycoproteins*/genetics , Glycosyltransferases*/genetics , Glycosyltransferases*/metabolism, Cricetinae ; Animals ; Glycosylation ; Cricetulus ; CHO Cells ; Polysaccharides/genetics ; Recombinant Proteins/genetics ; Recombinant Proteins/metabolism

Authors: Joshi CJ; Department of Pediatrics, University of California, San Diego, School of Medicine, La Jolla, California, United States of America., Ke W; Department of Biology and Cell Biology, University of Virginia, Charlottesville, Virginia, United States of America., Drangowska-Way A; Department of Biology and Cell Biology, University of Virginia, Charlottesville, Virginia, United States of America., O'Rourke EJ; Department of Biology and Cell Biology, University of Virginia, Charlottesville, Virginia, United States of America., Lewis NE; Department of Pediatrics, University of California, San Diego, School of Medicine, La Jolla, California, United States of America.; Novo Nordisk Foundation Center for Biosustainability at the University of California, San Diego, School of Medicine, La Jolla, California, United States of America.; Department of Bioengineering, University of California, San Diego, La Jolla, California, United States of America.; National Biologics Facility, Technical University of Denmark, Kongens Lyngby, Denmark.

Source: PLoS computational biology [PLoS Comput Biol] 2022 Jul 13; Vol. 18 (7), pp. e1010295. Date of Electronic Publication: 2022 Jul 13 (Print Publication: 2022).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Authors: Armingol E; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, CA, 92093, USA.; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Baghdassarian HM; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, CA, 92093, USA.; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Martino C; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, CA, 92093, USA.; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.; Center for Microbiome Innovation, University of California San Diego, La Jolla, CA, 92093, USA., Perez-Lopez A; Biomedicine Research Unit, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla, México, 54090, México., Aamodt C; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Knight R; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.; Center for Microbiome Innovation, University of California San Diego, La Jolla, CA, 92093, USA.; Department of Computer Science and Engineering, University of California San Diego, La Jolla, CA, 92093, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, CA, 92093, USA., Lewis NE; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA. nlewisres@ucsd.edu.; Department of Bioengineering, University of California, San Diego, La Jolla, CA, 92093, USA. nlewisres@ucsd.edu.

Source: Nature communications [Nat Commun] 2022 Jun 27; Vol. 13 (1), pp. 3665. Date of Electronic Publication: 2022 Jun 27.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Authors: Kellman BP; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, CA, 92093, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, CA, 92093, USA., Richelle A; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Yang JY; Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA., Chapla D; Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA., Chiang AWT; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Najera JA; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Liang C; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, CA, 92093, USA., Fürst A; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Bao B; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.; Bioinformatics and Systems Biology Graduate Program, University of California, San Diego, La Jolla, CA, 92093, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, CA, 92093, USA., Koga N; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Mohammad MA; Department of Pediatrics, Children's Nutrition Research Center, US Department of Agriculture/Agricultural Research Service, Baylor College of Medicine, Houston, TX, 77030, USA., Bruntse AB; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA., Haymond MW; Department of Pediatrics, Children's Nutrition Research Center, US Department of Agriculture/Agricultural Research Service, Baylor College of Medicine, Houston, TX, 77030, USA., Moremen KW; Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA., Bode L; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.; Larsson-Rosenquist Foundation Mother-Milk-Infant Center of Research Excellence (MOMI CORE), University of California, San Diego, La Jolla, CA, 92093, USA., Lewis NE; Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA. nlewisres@ucsd.edu.; Department of Bioengineering, University of California, San Diego, La Jolla, CA, 92093, USA. nlewisres@ucsd.edu.

Source: Nature communications [Nat Commun] 2022 May 04; Vol. 13 (1), pp. 2455. Date of Electronic Publication: 2022 May 04.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Authors: Lewis NE; Hematopathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Gao Q; Hematopathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Petrova-Drus K; Hematopathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.; Diagnostic Molecular Pathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Pulitzer M; Dermatopathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Sigler A; Hematopathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Baik J; Hematopathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Moskowitz AJ; Lymphoma Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Horwitz SM; Lymphoma Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Dogan A; Hematopathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA., Roshal M; Hematopathology Service, Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.

Source: Cytometry. Part B, Clinical cytometry [Cytometry B Clin Cytom] 2022 May; Vol. 102 (3), pp. 189-198. Date of Electronic Publication: 2022 Apr 22.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley-Liss Country of Publication: United States NLM ID: 101235690 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1552-4957 (Electronic) Linking ISSN: 15524949 NLM ISO Abbreviation: Cytometry B Clin Cytom Subsets: MEDLINE

Authors: Fitzgerald KN; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Quesada AE; Department of Hematopathology, The University of Texas M.D. Anderson Cancer Center, Houston, Texas, USA., von Keudell G; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Raj S; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Lewis NE; Department of Hematopathology, The University of Texas M.D. Anderson Cancer Center, Houston, Texas, USA., Dogan A; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Salles G; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Palomba ML; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.

Source: Leukemia & lymphoma [Leuk Lymphoma] 2022 Mar; Vol. 63 (3), pp. 751-754. Date of Electronic Publication: 2021 Dec 23.

Publication Type: Case Reports; Letter; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 9007422 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1029-2403 (Electronic) Linking ISSN: 10268022 NLM ISO Abbreviation: Leuk Lymphoma Subsets: MEDLINE

Authors: Spahn PN; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; The Novo Nordisk Foundation Center for Biosustainability at the University of California, San Diego School of Medicine, San Diego, La Jolla, California, USA., Zhang X; Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, Delaware, USA., Hu Q; Department of Pathology, University of Texas Southwestern Medical Center, Dallas, Texas, USA., Lu H; Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, Texas, USA., Hamaker NK; Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, Delaware, USA., Hefzi H; Department of Bioengineering, University of California, San Diego, La Jolla, California, USA., Li S; Department of Bioengineering, University of California, San Diego, La Jolla, California, USA., Kuo CC; Department of Bioengineering, University of California, San Diego, La Jolla, California, USA., Huang Y; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA., Lee JC; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, California, USA., Davis AJ; Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, Texas, USA., Ly P; Department of Pathology, University of Texas Southwestern Medical Center, Dallas, Texas, USA., Lee KH; Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, Delaware, USA., Lewis NE; Department of Pediatrics, University of California, San Diego, La Jolla, California, USA.; The Novo Nordisk Foundation Center for Biosustainability at the University of California, San Diego School of Medicine, San Diego, La Jolla, California, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, California, USA.

Source: Biotechnology and bioengineering [Biotechnol Bioeng] 2022 Mar; Vol. 119 (3), pp. 963-982. Date of Electronic Publication: 2022 Jan 05.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Wiley Country of Publication: United States NLM ID: 7502021 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0290 (Electronic) Linking ISSN: 00063592 NLM ISO Abbreviation: Biotechnol Bioeng Subsets: MEDLINE

Authors: Bao B; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA.; Department of Pediatrics, University of California San Diego, La Jolla, CA, USA.; Bioinformatics and Systems Biology Program, University of California San Diego, La Jolla, CA, USA.; Department of Bioengineering, University of California San Diego, La Jolla, CA, USA., Zahiri J; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA., Gazestani VH; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA.; Department of Pediatrics, University of California San Diego, La Jolla, CA, USA., Lopez L; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA., Xiao Y; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA.; Center for Language and Brain, Shenzhen Institute of Neuroscience, Shenzhen, China., Kim R; Department of Computer Science, University of North Carolina, Chapel Hill, NC, USA.; Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA., Wen TH; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA., Chiang AWT; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA.; Department of Pediatrics, University of California San Diego, La Jolla, CA, USA., Nalabolu S; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA., Pierce K; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA., Robasky K; Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.; Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27514, US.; School of Information and Library Science, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.; Carolina Health and Informatics Program, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA., Wang T; Department of Medical Genetics, Center for Medical Genetics, Peking University Health Science Center, 100191, Beijing, China.; Neuroscience Research Institute, Peking University; Key Laboratory for Neuroscience, Ministry of Education of China & National Health Commission of China, 100191, Beijing, China., Hoekzema K; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, 98195, USA., Eichler EE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, 98195, USA.; Howard Hughes Medical Institute, University of Washington, Seattle, WA, 98195, USA., Lewis NE; Department of Pediatrics, University of California San Diego, La Jolla, CA, USA. nlewisres@ucsd.edu.; Bioinformatics and Systems Biology Program, University of California San Diego, La Jolla, CA, USA. nlewisres@ucsd.edu.; Department of Bioengineering, University of California San Diego, La Jolla, CA, USA. nlewisres@ucsd.edu., Courchesne E; Autism Center of Excellence, Department of Neuroscience, University of California San Diego, La Jolla, CA, USA. ecourchesne1949@gmail.com.

Source: Molecular psychiatry [Mol Psychiatry] 2023 Feb; Vol. 28 (2), pp. 822-833. Date of Electronic Publication: 2022 Oct 20.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Specialist Journals Country of Publication: England NLM ID: 9607835 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-5578 (Electronic) Linking ISSN: 13594184 NLM ISO Abbreviation: Mol Psychiatry Subsets: MEDLINE

MeSH Terms: Autism Spectrum Disorder*/diagnosis , Autism Spectrum Disorder*/genetics, Humans ; Child, Preschool ; Infant ; Bayes Theorem ; Phosphatidylinositol 3-Kinases ; Immunity ; Gene Expression