Authors: Tian R; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China.; Sun Yat-sen University Nanchang Research Institution, Nanchang330200, China., Huang Z; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China., Li L; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China., Yuan J; Department of Pathology, Renmin Hospital, Wuhan University, Wuhan430060, China., Zhang Q; Department of Obstetrics and Gynecology, Academician expert workstation, The Central Hospital of Wuhan, Tongji Medical College, Huazhong University of Science and Technology, Wuhan430030, China., Meng L; Faculty of Health Sciences and Sports, Macao Polytechnic University, Macao999078, China., Lang B; Faculty of Health Sciences and Sports, Macao Polytechnic University, Macao999078, China.; Peking University Health Science Center-Macao Polytechnic University Nursing Academy, Macao Polytechnic University, Macao999078, China., Hong Y; Generulor Company Bio-X Lab, Zhuhai519000, China., Zhong C; Generulor Company Bio-X Lab, Zhuhai519000, China., Tian X; Department of Obstetrics and Gynecology, Academician expert workstation, The Central Hospital of Wuhan, Tongji Medical College, Huazhong University of Science and Technology, Wuhan430030, China., Cui Z; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China., Jin Z; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China., Liu J; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China., Huang Z; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China., Wang Y; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China., Chen Y; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China., Hu Z; Department of Gynecologic Oncology, Zhongnan Hospital of Wuhan University, Wuhan430071, China.; Department of Gynecological Oncology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou510080, China.; Sun Yat-sen University Nanchang Research Institution, Nanchang330200, China.

Source: Nucleic acids research [Nucleic Acids Res] 2023 May 22; Vol. 51 (9), pp. 4237-4251.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Authors: Smith GD; Victor Chang Cardiac Research Institute, 405 Liverpool Street, Darlinghurst, NSW, Australia.; School of Biotechnology and Biomolecular Sciences, UNSW Sydney, Kensington, NSW, Australia., Ching WH; Victor Chang Cardiac Research Institute, 405 Liverpool Street, Darlinghurst, NSW, Australia., Cornejo-Páramo P; Victor Chang Cardiac Research Institute, 405 Liverpool Street, Darlinghurst, NSW, Australia.; School of Biotechnology and Biomolecular Sciences, UNSW Sydney, Kensington, NSW, Australia., Wong ES; Victor Chang Cardiac Research Institute, 405 Liverpool Street, Darlinghurst, NSW, Australia. e.wong@victorchang.edu.au.; School of Biotechnology and Biomolecular Sciences, UNSW Sydney, Kensington, NSW, Australia. e.wong@victorchang.edu.au.

Source: Genome biology [Genome Biol] 2023 May 12; Vol. 24 (1), pp. 116. Date of Electronic Publication: 2023 May 12.

Publication Type: Journal Article; Review; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Authors: Stefan K; Division of Allergy & Immunology, Cincinnati Children's Hospital Medical Center, 3333 Burnet Avenue, MLC 7028, Cincinnati, OH, 45229-3026, USA.; Medical Scientist Training Program (MSTP), University of Cincinnati College of Medicine, Cincinnati, OH, 45267, USA., Barski A; Division of Allergy & Immunology, Cincinnati Children's Hospital Medical Center, 3333 Burnet Avenue, MLC 7028, Cincinnati, OH, 45229-3026, USA. Artem.Barski@cchmc.org.; Division of Human Genetics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, 45229-3026, USA. Artem.Barski@cchmc.org.; Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, 45267, USA. Artem.Barski@cchmc.org.

Source: BMC genomics [BMC Genomics] 2023 May 11; Vol. 24 (1), pp. 253. Date of Electronic Publication: 2023 May 11.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

Authors: Mawla AM; Department of Neurobiology, Physiology & Behavior, College of Biological Sciences, University of California, One Shields Avenue, Davis, CA, 95616, USA., van der Meulen T; Department of Neurobiology, Physiology & Behavior, College of Biological Sciences, University of California, One Shields Avenue, Davis, CA, 95616, USA., Huising MO; Department of Neurobiology, Physiology & Behavior, College of Biological Sciences, University of California, One Shields Avenue, Davis, CA, 95616, USA. mhuising@ucdavis.edu.; Department of Physiology and Membrane Biology, School of Medicine, University of California, One Shields Avenue, Davis, CA, 95616, USA. mhuising@ucdavis.edu.

Source: BMC genomics [BMC Genomics] 2023 Apr 17; Vol. 24 (1), pp. 202. Date of Electronic Publication: 2023 Apr 17.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

Authors: Karollus A; School of Computation, Information and Technology, Technical University of Munich, Garching, Germany. alexander.karollus@tum.de., Mauermeier T; School of Computation, Information and Technology, Technical University of Munich, Garching, Germany., Gagneur J; School of Computation, Information and Technology, Technical University of Munich, Garching, Germany. gagneur@in.tum.de.; Institute of Human Genetics, School of Medicine, Technical University of Munich, Munich, Germany. gagneur@in.tum.de.; Institute of Computational Biology, Helmholtz Zentrum München, Neuherberg, Germany. gagneur@in.tum.de.; Munich Data Science Institute, Technical University of Munich, Garching, Germany. gagneur@in.tum.de.

Source: Genome biology [Genome Biol] 2023 Mar 27; Vol. 24 (1), pp. 56. Date of Electronic Publication: 2023 Mar 27.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Authors: Wang Y; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Song C; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Computer, University of South China, Hengyang, Hunan 421001, China.; The First Affiliated Hospital, Cardiovascular Lab of Big Data and Imaging Artificial Intelligence, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China., Zhao J; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Zhang Y; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Computer, University of South China, Hengyang, Hunan 421001, China.; The First Affiliated Hospital, Cardiovascular Lab of Big Data and Imaging Artificial Intelligence, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China., Zhao X; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Feng C; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Zhang G; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Computer, University of South China, Hengyang, Hunan 421001, China., Zhu J; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Wang F; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Qian F; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Computer, University of South China, Hengyang, Hunan 421001, China.; The First Affiliated Hospital, Cardiovascular Lab of Big Data and Imaging Artificial Intelligence, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China., Zhou L; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Zhang J; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Bai X; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Ai B; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Liu X; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China., Wang Q; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.; School of Computer, University of South China, Hengyang, Hunan 421001, China.; The First Affiliated Hospital, Cardiovascular Lab of Big Data and Imaging Artificial Intelligence, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; Hunan Provincial Base for Scientific and Technological Innovation Cooperation, University of South China, Hengyang, Hunan 421001, China.; The First Affiliated Hospital, Department of Cardiology, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; Department of Cell Biology and Genetics, School of Basic Medical Sciences, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China., Li C; The First Affiliated Hospital, Institute of Cardiovascular Disease, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; School of Medical Informatics, Daqing Campus, Harbin Medical University, Daqing 163319, China.; School of Computer, University of South China, Hengyang, Hunan 421001, China.; The First Affiliated Hospital, Cardiovascular Lab of Big Data and Imaging Artificial Intelligence, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; Hunan Provincial Base for Scientific and Technological Innovation Cooperation, University of South China, Hengyang, Hunan 421001, China.; The First Affiliated Hospital, Department of Cardiology, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.; Department of Cell Biology and Genetics, School of Basic Medical Sciences, Hengyang Medical School, University of South China, Hengyang, Hunan 421001, China.

Source: Nucleic acids research [Nucleic Acids Res] 2023 Jan 06; Vol. 51 (D1), pp. D280-D290.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Authors: Klonizakis A; Genome Biology Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), C/ del Dr. Aiguader 88, Barcelona 08003, Spain.; Department of Medicine and Life Sciences, Universitat Pompeu Fabra (UPF), Doctor Aiguader 88, Barcelona 08003, Spain., Nikolaou C; Institute for Bioinnovation, Biomedical Sciences Research Centre 'Alexander Fleming', Fleming 34, Vari 16672, Greece., Graf T; Genome Biology Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), C/ del Dr. Aiguader 88, Barcelona 08003, Spain.; Department of Medicine and Life Sciences, Universitat Pompeu Fabra (UPF), Doctor Aiguader 88, Barcelona 08003, Spain.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Jan 01; Vol. 39 (1).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Authors: Wang Y; School of Artificial Intelligence, Jilin University, Changchun, China., Hou Z; School of Artificial Intelligence, Jilin University, Changchun, China., Yang Y; Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Canada., Wong KC; Department of Computer science, City University of Hong Kong, Hong Kong, Special Administrative Region., Li X; School of Artificial Intelligence, Jilin University, Changchun, China.

Source: PLoS computational biology [PLoS Comput Biol] 2022 Dec 15; Vol. 18 (12), pp. e1010779. Date of Electronic Publication: 2022 Dec 15 (Print Publication: 2022).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Authors: Liao M; College of Mathematics and System Sciences, Xinjiang University, Ürümqi, China., Zhao JP; College of Mathematics and System Sciences, Xinjiang University, Ürümqi, China. zhaojianping@126.com., Tian J; College of Mathematics and System Sciences, Xinjiang University, Ürümqi, China., Zheng CH; College of Mathematics and System Sciences, Xinjiang University, Ürümqi, China. zhengch99@126.com.; School of Computer Science and Technology, Anhui University, Hefei, China. zhengch99@126.com.

Source: BMC bioinformatics [BMC Bioinformatics] 2022 Nov 14; Vol. 23 (1), pp. 480. Date of Electronic Publication: 2022 Nov 14.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

Authors: Galle E; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Wong CW; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Ghosh A; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.; Functional Genomics Center Zurich, ETH Zurich and University Zurich, Zurich, Switzerland., Desgeorges T; Laboratory of Exercise and Health, Institute of Human Movement Sciences and Sport, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Melrose K; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Hinte LC; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Castellano-Castillo D; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Engl M; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., de Sousa JA; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Ruiz-Ojeda FJ; RG Adipocytes and Metabolism, Institute for Diabetes and Obesity, Helmholtz Diabetes Center at Helmholtz Center Munich, Neuherberg, 85764, Munich, Germany.; Department of Biochemistry and Molecular Biology II, School of Pharmacy, University of Granada, 18071, Granada, Spain., De Bock K; Laboratory of Exercise and Health, Institute of Human Movement Sciences and Sport, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland., Ruiz JR; PROFITH (PROmoting FITness and Health through Physical Activity) Research Group, Department of Physical Education and Sport, Faculty of Sport Sciences, University of Granada, Granada, Spain., von Meyenn F; Laboratory of Nutrition and Metabolic Epigenetics, Institute for Food, Nutrition and Health, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland. ferdinand.vonmeyenn@hest.ethz.ch.

Source: Genome biology [Genome Biol] 2022 Oct 03; Vol. 23 (1), pp. 207. Date of Electronic Publication: 2022 Oct 03.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

Authors: Zhou P; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., VanDusen NJ; Department of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, USA., Zhang Y; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., Cao Y; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., Sethi I; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., Hu R; Ludwig Institute for Cancer Research, Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA, USA., Zhang S; Houston Methodist Hospital Research Institute, Houston, TX 77030, USA., Wang G; Cardiovascular Department, Houston Methodist, Weill Cornell Medical College, Houston, TX, USA., Ye L; Department of Thoracic and Cardiovascular Surgery, Shanghai Children's Medical Center, School of Medicine, Shanghai Jiao Tong University, Shanghai, China., Mazumdar N; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., Chen J; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., Zhang X; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., Guo Y; Peking University Health Science Center, Beijing, China., Li B; Ludwig Institute for Cancer Research, Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA, USA., Ma Q; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., Lee JY; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA., Gu W; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA; Department of Pharmacology, School of Pharmacy, Shanghai University of Traditional Chinese Medicine, Shanghai, China., Yuan GC; Department of Genetics and Genomic Sciences, Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Ren B; Ludwig Institute for Cancer Research, Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA, USA., Chen K; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA. Electronic address: kaifu.chen@childrens.harvard.edu., Pu WT; Department of Cardiology, Boston Children's Hospital, Boston, MA, USA; Harvard Stem Cell Institute, Cambridge, MA, USA. Electronic address: william.pu@cardio.chboston.org.

Source: Developmental cell [Dev Cell] 2023 May 22; Vol. 58 (10), pp. 898-914.e7. Date of Electronic Publication: 2023 Apr 17.

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101120028 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-1551 (Electronic) Linking ISSN: 15345807 NLM ISO Abbreviation: Dev Cell Subsets: MEDLINE

MeSH Terms: Enhancer Elements, Genetic* , Myocytes, Cardiac*, Animals ; Mice ; Chromatin ; Promoter Regions, Genetic ; Transcriptome

Authors: Du Z; New Cornerstone Science Laboratory, MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing 100084, China; Tsinghua-Peking Center for Life Sciences, Beijing 100084, China., Xie W; New Cornerstone Science Laboratory, MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing 100084, China; Tsinghua-Peking Center for Life Sciences, Beijing 100084, China. Electronic address: xiewei121@tsinghua.edu.cn.

Source: Molecular cell [Mol Cell] 2023 May 18; Vol. 83 (10), pp. 1542-1544.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Comment

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 9802571 Publication Model: Print Cited Medium: Internet ISSN: 1097-4164 (Electronic) Linking ISSN: 10972765 NLM ISO Abbreviation: Mol Cell Subsets: MEDLINE

MeSH Terms: Enhancer Elements, Genetic* , Chromatin*/genetics, Animals ; Humans ; Promoter Regions, Genetic ; Drosophila/genetics

Authors: Wu H; College of Information Engineering, Northwest A&F University, Yangling, 712100, Shaanxi, China.; School of Software, Shandong University, Jinan, 250101, Shandong, China., Liu M; College of Information Engineering, Northwest A&F University, Yangling, 712100, Shaanxi, China., Zhang P; College of Information Engineering, Northwest A&F University, Yangling, 712100, Shaanxi, China., Zhang H; College of Information Engineering, Northwest A&F University, Yangling, 712100, Shaanxi, China.

Source: Briefings in functional genomics [Brief Funct Genomics] 2023 May 18; Vol. 22 (3), pp. 302-311.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101528229 Publication Model: Print Cited Medium: Internet ISSN: 2041-2657 (Electronic) Linking ISSN: 20412649 NLM ISO Abbreviation: Brief Funct Genomics Subsets: MEDLINE

MeSH Terms: Enhancer Elements, Genetic*/genetics , Software*, Promoter Regions, Genetic/genetics ; Sequence Analysis, DNA/methods ; DNA ; Machine Learning

Authors: Smith C; Université de Paris Cité, Institut Necker Enfants-Malades (INEM), Institut National de la Santé et de la Recherche Médicale (Inserm) U1151, and Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, 75743 Paris., Goyal A; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Weichenhan D; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Allemand E; Université de Paris Cité, Institut Imagine, Inserm U1163, Paris., Mayakonda A; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Toprak U; Hopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany; Division of Neuroblastoma Genomics, German Cancer Research Center (DKFZ), Heidelberg., Riedel A; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Balducci E; Université de Paris Cité, Institut Necker Enfants-Malades (INEM), Institut National de la Santé et de la Recherche Médicale (Inserm) U1151, and Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, 75743 Paris., Manojkumar M; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Pejkovska A; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Mücke O; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Sollier E; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Bakr A; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Breuer K; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Lutsik P; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg., Hermine O; Université de Paris Cité, Institut Imagine, Inserm U1163, Paris, France; Department of Hematology, Hôpital Necker Enfants Malades, AP-HP, Faculté de Médecine Paris Descartes, Paris., Spicuglia S; Aix-Marseille University, Inserm, Theories and Approaches of Genomic Complexity (TAGC), Equipe labellisée Ligue, UMR1090, 13288 Marseille., Asnafi V; Université de Paris Cité, Institut Necker Enfants-Malades (INEM), Institut National de la Santé et de la Recherche Médicale (Inserm) U1151, and Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, 75743 Paris., Plass C; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany; German Cancer Research Consortium (DKTK), 69120 Heidelberg. c.plass@dkfz.de., Touzart A; Université de Paris Cité, Institut Necker Enfants-Malades (INEM), Institut National de la Santé et de la Recherche Médicale (Inserm) U1151, and Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, 75743 Paris, France; Division of Cancer Epigenomics, German Cancer Research Center (DKFZ), 69120 Heidelberg. aurore.touzart@aphp.fr.

Source: Haematologica [Haematologica] 2023 May 01; Vol. 108 (5), pp. 1259-1271. Date of Electronic Publication: 2023 May 01.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Ferrata Storti Foundation Country of Publication: Italy NLM ID: 0417435 Publication Model: Electronic Cited Medium: Internet ISSN: 1592-8721 (Electronic) Linking ISSN: 03906078 NLM ISO Abbreviation: Haematologica Subsets: MEDLINE

MeSH Terms: Precursor T-Cell Lymphoblastic Leukemia-Lymphoma*/genetics , T-Cell Acute Lymphocytic Leukemia Protein 1*/genetics , Enhancer Elements, Genetic*, Humans ; Basic Helix-Loop-Helix Transcription Factors/metabolism ; Mutation ; Oncogene Proteins, Fusion/genetics ; T-Lymphocytes/metabolism ; Transcription Factors/genetics

Authors: Kaplow IM; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, USA., Lawler AJ; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, USA.; Department of Biology, Carnegie Mellon University, Pittsburgh, PA, USA., Schäffer DE; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA., Srinivasan C; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA., Sestili HH; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA., Wirthlin ME; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, USA., Phan BN; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, USA.; Medical Scientist Training Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA., Prasad K; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA., Brown AR; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA., Zhang X; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA., Foley K; Department of Biological Sciences, Lehigh University, Bethlehem, PA, USA., Genereux DP; Broad Institute, Cambridge, MA, USA.; Program in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, MA, USA., Karlsson EK; Broad Institute, Cambridge, MA, USA.; Program in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, MA, USA., Lindblad-Toh K; Broad Institute, Cambridge, MA, USA.; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden., Meyer WK; Department of Biological Sciences, Lehigh University, Bethlehem, PA, USA., Pfenning AR; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, USA.; Department of Biology, Carnegie Mellon University, Pittsburgh, PA, USA.

Corporate Authors: Zoonomia Consortium**

Source: Science (New York, N.Y.) [Science] 2023 Apr 28; Vol. 380 (6643), pp. eabm7993. Date of Electronic Publication: 2023 Apr 28.

Publication Type: Journal Article

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 0404511 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9203 (Electronic) Linking ISSN: 00368075 NLM ISO Abbreviation: Science Subsets: MEDLINE

MeSH Terms: Enhancer Elements, Genetic* , Genetic Variation* , Machine Learning* , Mammals*/genetics, Animals ; Phenotype

Authors: Chan YC; Institute of Physiology, Focus Program Translational Neurosciences, University Medical Center, Johannes Gutenberg University Mainz, Mainz, Germany., Kienle E; Institute of Physiology, Focus Program Translational Neurosciences, University Medical Center, Johannes Gutenberg University Mainz, Mainz, Germany., Oti M; Institute of Molecular Biology GmbH (IMB), Mainz, Germany.; Global Computational Biology and Digital Sciences, Boehringer Ingelheim Pharma GmbH & Co. KG, Biberach an Der Riß, Germany., Di Liddo A; Institute of Molecular Biology GmbH (IMB), Mainz, Germany., Mendez-Lago M; Institute of Molecular Biology GmbH (IMB), Mainz, Germany., Aschauer DF; Institute of Physiology, Focus Program Translational Neurosciences, University Medical Center, Johannes Gutenberg University Mainz, Mainz, Germany., Peter M; Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Vienna, Austria.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA., Pagani M; Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Vienna, Austria., Arnold C; Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Vienna, Austria.; CeMM Research Center for Molecular Medicine, Austrian Academy of Sciences, Vienna, Austria., Vonderheit A; Institute of Molecular Biology GmbH (IMB), Mainz, Germany., Schön C; Research Beyond Borders, Boehringer Ingelheim Pharma GmbH & Co. KG, Biberach an Der Riß, Germany., Kreuz S; Research Beyond Borders, Boehringer Ingelheim Pharma GmbH & Co. KG, Biberach an Der Riß, Germany., Stark A; Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Vienna, Austria.; Medical University of Vienna, Vienna BioCenter (VBC), 1030, Vienna, Austria., Rumpel S; Institute of Physiology, Focus Program Translational Neurosciences, University Medical Center, Johannes Gutenberg University Mainz, Mainz, Germany. sirumpel@uni-mainz.de.

Source: Scientific reports [Sci Rep] 2023 Apr 25; Vol. 13 (1), pp. 6745. Date of Electronic Publication: 2023 Apr 25.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

MeSH Terms: Enhancer Elements, Genetic* , Genomics*/methods, Animals ; Mice ; Chromosome Mapping/methods ; Promoter Regions, Genetic ; Brain

Authors: Kravchuk EV; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia.; Faculty of Biology, Lomonosov Moscow State University, Leninskiye Gory, MSU, 1-12, 119991 Moscow, Russia., Ashniev GA; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia.; Faculty of Biology, Lomonosov Moscow State University, Leninskiye Gory, MSU, 1-12, 119991 Moscow, Russia.; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, GSP-1, Leninskiye Gory, MSU, 1-73, 119234 Moscow, Russia., Gladkova MG; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, GSP-1, Leninskiye Gory, MSU, 1-73, 119234 Moscow, Russia., Orlov AV; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia., Vasileva AV; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia., Boldyreva AV; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia., Burenin AG; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia., Skirda AM; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia., Nikitin PI; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia., Orlova NN; Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St., 119991 Moscow, Russia.

Source: Cells [Cells] 2023 Apr 19; Vol. 12 (8). Date of Electronic Publication: 2023 Apr 19.

Publication Type: Journal Article; Review; Research Support, Non-U.S. Gov't

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101600052 Publication Model: Electronic Cited Medium: Internet ISSN: 2073-4409 (Electronic) Linking ISSN: 20734409 NLM ISO Abbreviation: Cells Subsets: MEDLINE

MeSH Terms: Enhancer Elements, Genetic*/genetics , Neoplasms*/genetics, Humans ; Prospective Studies ; Reproducibility of Results ; Carcinogenesis/genetics

Authors: Chen HV; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA. Electronic address: chen_hsiu-yi@idlabs.a-star.edu.sg., Lorenzini MH; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA; Biomedical Sciences Graduate Program, University of California San Diego, La Jolla, CA, USA., Lavalle SN; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA., Sajeev K; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA; School of Biological Sciences, University of California San Diego, La Jolla, CA, USA., Fonseca A; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA., Fiaux PC; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA; Bioinformatics and Systems Biology Graduate Program, University of California San Diego, La Jolla, CA, USA., Sen A; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA., Luthra I; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA., Ho AJ; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA., Chen AR; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA., Guruvayurappan K; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA; School of Biological Sciences, University of California San Diego, La Jolla, CA, USA., O'Connor C; Flow Cytometry Core Facility, Salk Institute for Biological Studies, La Jolla, CA, USA., McVicker G; Integrative Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA. Electronic address: gmcvicker@salk.edu.

Source: American journal of human genetics [Am J Hum Genet] 2023 Apr 06; Vol. 110 (4), pp. 703-714. Date of Electronic Publication: 2023 Mar 28.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 0370475 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1537-6605 (Electronic) Linking ISSN: 00029297 NLM ISO Abbreviation: Am J Hum Genet Subsets: MEDLINE

MeSH Terms: Enhancer Elements, Genetic* , GATA3 Transcription Factor*/genetics , Regulatory Sequences, Nucleic Acid* , T-Lymphocytes* , Hypersensitivity*/genetics, Humans ; Alleles ; Genome-Wide Association Study ; Quantitative Trait Loci ; Chromosome Mapping ; Gene Deletion

Authors: Mills C; Division of Bioinformatics, Department of Population and Public Health Sciences, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90089, USA., Marconett CN; Department of Surgery, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90089, USA.; Department of Biochemistry and Molecular Medicine, Keck School of Medicine USC, Los Angeles, CA, USA.; Norris Cancer Center, Keck School of Medicine USC, Los Angeles, CA, USA., Lewinger JP; Division of Biostatistics, Department of Population and Public Health Sciences, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90089, USA. lewinger@usc.edu., Mi H; Division of Bioinformatics, Department of Population and Public Health Sciences, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90089, USA. huaiyumi@usc.edu.

Source: NPJ systems biology and applications [NPJ Syst Biol Appl] 2023 Apr 03; Vol. 9 (1), pp. 9. Date of Electronic Publication: 2023 Apr 03.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature Publishing Group in partnership with SBI, The Systems Biology Institute Country of Publication: England NLM ID: 101677786 Publication Model: Electronic Cited Medium: Internet ISSN: 2056-7189 (Electronic) Linking ISSN: 20567189 NLM ISO Abbreviation: NPJ Syst Biol Appl Subsets: MEDLINE

MeSH Terms: Enhancer Elements, Genetic*/genetics , Genome-Wide Association Study*, Gene Expression Regulation/genetics ; Machine Learning

Authors: Kim YW; Department of Molecular Biology, College of Natural Sciences, Pusan National University, Busan, South Korea.; Department of Biomedical Laboratory Science, College of Healthcare Medical Science and Engineering, Inje University, Gimhae, South Korea., Kang J; Department of Molecular Biology, College of Natural Sciences, Pusan National University, Busan, South Korea., Kim A; Department of Molecular Biology, College of Natural Sciences, Pusan National University, Busan, South Korea.

Source: FASEB journal : official publication of the Federation of American Societies for Experimental Biology [FASEB J] 2023 Apr; Vol. 37 (4), pp. e22870.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Federation of American Societies for Experimental Biology Country of Publication: United States NLM ID: 8804484 Publication Model: Print Cited Medium: Internet ISSN: 1530-6860 (Electronic) Linking ISSN: 08926638 NLM ISO Abbreviation: FASEB J Subsets: MEDLINE

MeSH Terms: DNA, Intergenic*/genetics , DNA, Intergenic*/metabolism , Enhancer Elements, Genetic* , Hematopoiesis*/genetics , Histones*/genetics , Histones*/metabolism, Proto-Oncogene Proteins/genetics ; Proto-Oncogene Proteins/metabolism ; RNA/metabolism ; T-Cell Acute Lymphocytic Leukemia Protein 1/genetics ; T-Cell Acute Lymphocytic Leukemia Protein 1/metabolism