Search Results - Zuccolo, Andrea

Multitrait engineering of Hassawi red rice for sustainable cultivation by Sedeek, Khalid, Mohammed, Nahed, Zhou, Yong, Zuccolo, Andrea, Sanikommu, Krishnaveni, Kantharajappa, Sunitha, Al-Bader, Noor, Tashkandi, Manal, Wing, Rod A., Mahfouz, Magdy M.

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DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses by Wicker, Thomas, Yu, Yeisoo, Haberer, Georg, Mayer, Klaus F. X., Marri, Pradeep Reddy, Rounsley, Steve, Chen, Mingsheng, Zuccolo, Andrea, Panaud, Olivier, Wing, Rod A., Roffler, Stefan

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Multi-omics resources for targeted agronomic improvement of pigmented rice by Sedeek, Khalid, Zuccolo, Andrea, Fornasiero, Alice, Weber, Annika M., Sanikommu, Krishnaveni, Sampathkumar, Sangeetha, Rivera, Luis F., Butt, Haroon, Mussurova, Saule, Alhabsi, Abdulrahman, Nurmansyah, Nurmansyah, Ryan, Elizabeth P., Wing, Rod A., Mahfouz, Magdy M.

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Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza by Ammiraju, Jetty S. S., Zuccolo, Andrea, Yu, Yeisoo, Song, Xiang, Piegu, Benoit, Chevalier, Frederic, Walling, Jason G., Ma, Jianxin, Talag, Jayson, Brar, Darshan S., SanMiguel, Phillip J., Jiang, Ning, Jackson, Scott A., Panaud, Olivier, Wing, Rod A.

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A high-performance computational workflow to accelerate GATK SNP detection across a 25-genome dataset by Zhou, Yong, Kathiresan, Nagarajan, Yu, Zhichao, Rivera, Luis F., Yang, Yujian, Thimma, Manjula, Manickam, Keerthana, Chebotarov, Dmytro, Mauleon, Ramil, Chougule, Kapeel, Wei, Sharon, Gao, Tingting, Green, Carl D., Zuccolo, Andrea, Xie, Weibo, Ware, Doreen, Zhang, Jianwei, McNally, Kenneth L., Wing, Rod A.

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A platinum standard pan-genome resource that represents the population structure of Asian rice by Zhou, Yong, Chebotarov, Dmytro, Kudrna, Dave, Llaca, Victor, Lee, Seunghee, Rajasekar, Shanmugam, Mohammed, Nahed, Al-Bader, Noor, Sobel-Sorenson, Chandler, Parakkal, Praveena, Arbelaez, Lady Johanna, Franco, Natalia, Alexandrov, Nickolai, Hamilton, Ruaraidh Sackville, Leung, Hei, Mauleon, Ramil, Lorieux, Mathias, Zuccolo, Andrea, McNally, Kenneth, Zhang, Jianwei, Wing, Rod A.

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Twelve Platinum-Standard Reference Genomes Sequences (PSRefSeq) that complete the full range of genetic diversity of Asian rice by Zhou, Yong, Chebotarov, Dmytro, Kudrna, Dave, Llaca, Victor, Lee, Seunghee, Rajasekar, Shanmugam, Mohammed, Nahed, Al-Bader, Noor, Sobel-Sorenson, Chandler, Parakkal, Praveena, Arbelaez, Lady Johanna, Franco, Natalia, Alexandrov, Nickolai, Hamilton, Ruaraidh Sackville, Leung, Hei, Mauleon, Ramil, Lorieux, Mathias, Zuccolo, Andrea, McNally, Kenneth, Zhang, Jianwei, Wing, Rod A.

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Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice by Zhou, Yong, Yu, Zhichao, Chebotarov, Dmytro, Chougule, Kapeel, Lu, Zhenyuan, Rivera, Luis F., Kathiresan, Nagarajan, Al-Bader, Noor, Mohammed, Nahed, Alsantely, Aseel, Mussurova, Saule, Santos, João, Thimma, Manjula, Troukhan, Maxim, Fornasiero, Alice, Green, Carl D., Copetti, Dario, Kudrna, David, Llaca, Victor, Lorieux, Mathias, Zuccolo, Andrea, Ware, Doreen, McNally, Kenneth, Zhang, Jianwei, Wing, Rod A.

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Two gap-free reference genomes and a global view of the centromere architecture in rice by Song, Jia-Ming, Xie, Wen-Zhao, Wang, Shuo, Guo, Yi-Xiong, Koo, Dal-Hoe, Kudrna, Dave, Gong, Chenbo, Huang, Yicheng, Feng, Jia-Wu, Zhang, Wenhui, Zhou, Yong, Zuccolo, Andrea, Long, Evan, Lee, Seunghee, Talag, Jayson, Zhou, Run, Zhu, Xi-Tong, Yuan, Daojun, Udall, Joshua, Xie, Weibo, Wing, Rod A., Zhang, Qifa, Poland, Jesse, Zhang, Jianwei, Chen, Ling-Ling

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Oryza genome evolution through a tetraploid lens by Fornasiero, Alice, Feng, Tao, Al-Bader, Noor, Alsantely, Aseel, Mussurova, Saule, Hoang, Nam V., Misra, Gopal, Zhou, Yong, Fabbian, Leonardo, Mohammed, Nahed, Rivera Serna, Luis, Thimma, Manjula, Llaca, Victor, Parakkal, Praveena, Kudrna, David, Copetti, Dario, Rajasekar, Shanmugam, Lee, Seunghee, Talag, Jayson, Sobel-Sorenson, Chandler, Carpentier, Marie-Christine, Panaud, Olivier, McNally, Kenneth L., Zhang, Jianwei, Zuccolo, Andrea, Schranz, M. Eric, Wing, Rod A.

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Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication by Wu, Guohong Albert, Prochnik, Simon, Jenkins, Jerry, Salse, Jerome, Hellsten, Uffe, Murat, Florent, Perrier, Xavier, Ruiz, Manuel, Scalabrin, Simone, Terol, Javier, Takita, Marco Aurelio, Labadie, Karine, Poulain, Julie, Couloux, Arnaud, Jabbari, Kamel, Cattonaro, Federica, Del Fabbro, Cristian, Pinosio, Sara, Zuccolo, Andrea, Chapman, Jarrod, Grimwood, Jane, Tadeo, Francisco R., Estornell, Leandro H., Munoz-Sanz, Juan V., Ibanez, Victoria, Herrero-Ortega, Amparo, Aleza, Pablo, Perez-Perez, Julian, Ramon, Daniel, Brunel, Dominique, Luro, Francois, Chen, Chunxian, Farmerie, William G., Desany, Brian, Kodira, Chinnappa, Mohiuddin, Mohammed, Harkins, Tim, Fredrikson, Karin, Burns, Paul, Lomsadze, Alexandre, Borodovsky, Mark, Reforgiato, Giuseppe, Freitas-Astua, Juliana, Quetier, Francis, Navarro, Luis, Roose, Mikeal L., Wincker, Patrick, Schmutz, Jeremy, Morgante, Michele, Machado, Marcos Antonio, Talón, Manuel, Jaillon, Olivier, Ollitrault, Patrick, Gmitter Jr., Frederick G., Rokhsar, Daniel S.

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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza by Stein, Joshua C., Yu, Yeisoo, Copetti, Dario, Zwickl, Derrick J., Zhang, Li, Zhang, Chengjun, Chougule, Kapeel, Gao, Dongying, Iwata, Aiko, Goicoechea, Jose Luis, Wei, Sharon, Wang, Jun, Liao, Yi, Wang, Muhua, Jacquemin, Julie, Becker, Claude, Kudrna, Dave, Zhang, Jianwei, Londono, Carlos E. M., Song, Xiang, Lee, Seunghee, Sanchez, Paul, Zuccolo, Andrea, Ammiraju, Jetty S. S., Talag, Jayson, Danowitz, Ann, Rivera, Luis F., Gschwend, Andrea R., Noutsos, Christos, Wu, Cheng-chieh, Kao, Shu-Min, Zeng, Jhih-wun, Wei, Fu-Jin, Zhao, Qiang, Feng, Qi, El Baidouri, Moaine, Carpentier, Marie-Christine, Lasserre, Eric, Cooke, Richard, Rosa Farias, Daniel da, da Maia, Luciano Carlos, dos Santos, Railson S., Nyberg, Kevin G., McNally, Kenneth L., Mauleon, Ramil, Alexandrov, Nickolai, Schmutz, Jeremy, Flowers, Dave, Fan, Chuanzhu, Weigel, Detlef, Jena, Kshirod K., Wicker, Thomas, Chen, Mingsheng, Han, Bin, Henry, Robert, Hsing, Yue-ie C., Kurata, Nori, de Oliveira, Antonio Costa, Panaud, Olivier, Jackson, Scott A., Machado, Carlos A., Sanderson, Michael J., Long, Manyuan, Ware, Doreen, Wing, Rod A.

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